For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAEYDVIVVGFGAAGAAAAIEAADRGARVLALDRGYGGGATALSGGIIYAGAGTAEQHAGGHTDSVDNLR AYLTQEVGDAVGEDTLTRFCAESPGLIAWLKAQGVEFRGGPVSSYKTSYPTDDFYLYYSGNEKAYPYAQH AAPAPRGHRVLAPGMSSGRVLYERLRDSAKAKGVTVIPLARVHGLITDAGRVVGVRYRVLDQGHPNAHRH RVLTRATAKLGTWMPGLVNGVVARAERLWAEAAVQTEARAPSVILAAGGFIFNREWVQAHAPKFTKISPL GTAGDDGNGIALGLDAGGFTDKMGNVAAWRFLAPLSAFLEGLTVGADGRRITNEDLYGATHSNVMMREFG GTGWAIYDARTWAKIRGQVRTQTQLFQRLQLIYLFTTGHRKSSTLEGLARKNGIDPAGLRRTVDAYNSGI VSGTGDPAHKDPGLCAPMTTGPFYSIDISAASSMFYPVPGLTLGGLVVDEKTGEVMHRAGGTVAGLYAVG RTAVGICSNSYVSGLSLSDCVFSGRRAGAHAAG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4564 | - | - | 100% (523) | hypothetical protein Mflv_4564 |
M. gilvum PYR-GCK | Mflv_3411 | - | 2e-57 | 31.72% (536) | hypothetical protein Mflv_3411 |
M. gilvum PYR-GCK | Mflv_4550 | - | 1e-49 | 31.38% (529) | hypothetical protein Mflv_4550 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1848 | - | 8e-58 | 32.51% (526) | hypothetical protein Mb1848 |
M. tuberculosis H37Rv | Rv1817 | - | 8e-58 | 32.51% (526) | hypothetical protein Rv1817 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0623 | - | 1e-116 | 45.58% (520) | hypothetical protein MAB_0623 |
M. marinum M | MMAR_0205 | - | 1e-120 | 45.70% (523) | flavoprotein |
M. avium 104 | MAV_3022 | - | 3e-57 | 33.27% (535) | hypothetical protein MAV_3022 |
M. smegmatis MC2 155 | MSMEG_2873 | - | 0.0 | 75.38% (520) | hypothetical protein MSMEG_2873 |
M. thermoresistible (build 8) | TH_4191 | - | 0.0 | 75.48% (522) | PUTATIVE 3-ketosteroid-delta4 |
M. ulcerans Agy99 | MUL_4900 | - | 1e-114 | 44.17% (523) | hypothetical protein MUL_4900 |
M. vanbaalenii PYR-1 | Mvan_3165 | - | 1e-57 | 31.90% (536) | hypothetical protein Mvan_3165 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_2873|M.smegmatis_MC2_155 --------------MPTGRDYDVIIVGFGAAGASAAIEAADRGARVLVLD TH_4191|M.thermoresistible__bu --------------MPTAQEYDVIIVGFGAAGASAAIEAADRGARVLVLD Mflv_4564|M.gilvum_PYR-GCK -----------------MAEYDVIVVGFGAAGAAAAIEAADRGARVLALD MMAR_0205|M.marinum_M --------MADDTPEHIVESTDVVVIGFGAAGVSAAITAREQGVQVVALD MUL_4900|M.ulcerans_Agy99 --------MADDTPEHIVESTDVVVIGFGATGVSAAITAREQGVQVVALD MAB_0623|M.abscessus_ATCC_1997 --------MPGRS---DMPSADVIIVGYGVAGASAALAALERGASVIILE Mb1848|M.bovis_AF2122/97 MSTDIPATVSAETVTSWSDDVDVTVIGFGIAGGCAAVSAAAAGARVLVLE Rv1817|M.tuberculosis_H37Rv MSTDIPATVSAETVTSWSDDVDVTVIGFGIAGGCAAVSAAAAGARVLVLE Mvan_3165|M.vanbaalenii_PYR-1 -MQHIPETVNVGDVTSWSDEVDVVVVGFGIAGGCAAVSAAAAGARVLVLE MAV_3022|M.avium_104 MNTDVTP-IPASSITSWDHEADVVIAGYGVAGAAAAVEAARAGADVLVLE . ** : *:* :* .**: * *. *: *: MSMEG_2873|M.smegmatis_MC2_155 R-GYGGGATAYSGGIVYAGAGTPEQHAGGYSDSVENMRAYLEQEVAGAVK TH_4191|M.thermoresistible__bu R-GHGGGATAYSGGIVYAGAGTAEQQAGGHADSVENMRAYLAREVGDAVS Mflv_4564|M.gilvum_PYR-GCK R-GYGGGATALSGGIIYAGAGTAEQHAGGHTDSVDNLRAYLTQEVGDAVG MMAR_0205|M.marinum_M R-ANGGGATAISGGIIYAGGGTAVQQQAGVRDSFEQMLTYLRLEVADAVS MUL_4900|M.ulcerans_Agy99 R-ANGGGATAISGDIIYAGGGTAVQQQAGVRDSFEQMLTYLRLEVADAVS MAB_0623|M.abscessus_ATCC_1997 R-FDGGGASAISGGIYYAGGGTNIQRDAGVEDTPELMLEYLRLEVGDAVK Mb1848|M.bovis_AF2122/97 RAAAAGGTTALAGGHFYLGGGTTVQLATGHPDSPEEMYKYL-VAVSREPD Rv1817|M.tuberculosis_H37Rv RAAAAGGTTALAGGHFYLGGGTTVQLATGHPDSPEEMYKYL-VAVSREPD Mvan_3165|M.vanbaalenii_PYR-1 KAAAVGGTTSMAGGHFYLGGGTAVQQATGHDDSAEEMYKYL-VSQSRDPE MAV_3022|M.avium_104 RTGSWGGAAAMAGGFIYLGGGTPIQKACGFTDSVDNMAAFLNVAMGPGAD : **::: :*. * *.** * * *: : : :* . MSMEG_2873|M.smegmatis_MC2_155 PETLARFCEQSPALLEWLKAQGVPFRGGAGPSYKTSYPTDDNYLYYSGNE TH_4191|M.thermoresistible__bu PETLTRFCEQSPAMIEWLKAQGVEFRGGPVPPYKTSYPTDEHYLYYSGNE Mflv_4564|M.gilvum_PYR-GCK EDTLTRFCAESPGLIAWLKAQGVEFRGGPVSSYKTSYPTDDFYLYYSGNE MMAR_0205|M.marinum_M ESTLESFVRGSPGMIDWLSHYGVPFDS-TVCPYKTSFPNNHYYLYHSGSE MUL_4900|M.ulcerans_Agy99 ESTLESFVRGSPEMIDWLSNYGVPFDS-TVYPYKTSFPNNHYYLYHSGSE MAB_0623|M.abscessus_ATCC_1997 PETLQKFVDGSVDTLNWLQGYGVPFEG-SLAPFKTSYPTDDYYLYFSGSE Mb1848|M.bovis_AF2122/97 HDKIRAYCDGSVEHFNWLEGLGFQFER-SYFPGKAVIQPNTEGLMFTGNE Rv1817|M.tuberculosis_H37Rv HDKIRAYCDGSVEHFNWLEGLGFQFER-SYFPGKAVIQPNTEGLMFTGNE Mvan_3165|M.vanbaalenii_PYR-1 HDKIRAYCEGSVEHFNWLEALGFQFER-SYYPGKVVVPPGTEGLSYTGNE MAV_3022|M.avium_104 ADRIADYCAGSLAHFEWLVGCGVPFKA-EFFGEPGWEPMGDQGLMYSGGE . : : * : ** *. * . * .:*.* MSMEG_2873|M.smegmatis_MC2_155 KAYPYVDHAQPAPRGHRVLAPGMS-----SGRVLFERLRDSALAKGVHFT TH_4191|M.thermoresistible__bu TAFPYSEHAHPAPRGHRALAPGMR-----SGRVLFERLRDSALSKGVEFV Mflv_4564|M.gilvum_PYR-GCK KAYPYAQHAAPAPRGHRVLAPGMS-----SGRVLYERLRDSAKAKGVTVI MMAR_0205|M.marinum_M NSGAFRSHTPPVQRGHRVKGKGT------SGKQLYAPLAKAALSLGVQFY MUL_4900|M.ulcerans_Agy99 NSGAFRSHTPPVQRGHRVKGKGN------SGKQLYAPLAKAALSLGVQFY MAB_0623|M.abscessus_ATCC_1997 SSGMARAATPPRQRGHRAFGRGV------SGKALFAPLADSAERLGADVW Mb1848|M.bovis_AF2122/97 KVWPFLELAVPAPRGHKVPVP----GDTGGAAMVIDLLLKRAASLGIQIR Rv1817|M.tuberculosis_H37Rv KVWPFLELAVPAPRGHKVPVP----GDTGGAAMVIDLLLKRAASLGIQIR Mvan_3165|M.vanbaalenii_PYR-1 KVWPFCEQAKPAPRGHSVPVP----GELGGAAMVIDLLLKRAADLGVQIR MAV_3022|M.avium_104 NSYPFNTIASPAPRGHVPQMQNKKQGEASAGYMLMKPLVESATAAGARAL . : * *** .. : * . * * MSMEG_2873|M.smegmatis_MC2_155 PLAHVHSLIQDEDGRVTGVRYTVTDPGHRNARR-HRRIAKATGKLGTWMP TH_4191|M.thermoresistible__bu PLAHVHSLIQADDGRVTGVRYTVLDPGHRHARR-HRLITRATGKLGTWMP Mflv_4564|M.gilvum_PYR-GCK PLARVHGLIT-DAGRVVGVRYRVLDQGHPNAHR-HRVLTRATAKLGTWMP MMAR_0205|M.marinum_M PHTKVTKLLQDSTGRVTGVEAMTMHDAPPRIRRTYAALAAVSTKPGIYYP MUL_4900|M.ulcerans_Agy99 PHTKVTKLLQDSTGRVTGVEAMTMHDAPPRIRRAYAALAAVSTKPGIYYP MAB_0623|M.abscessus_ATCC_1997 RQTRVTGLVVE-EGRVVGVRGMTLKDAPAWARRLYSRLTHYATKPGIYYP Mb1848|M.bovis_AF2122/97 YETGATELIVDGTGKVTGVM------------------------------ Rv1817|M.tuberculosis_H37Rv YETGATELIVDGTGKVTGVM------------------------------ Mvan_3165|M.vanbaalenii_PYR-1 YETGVTGLVVDDDGAVVGVR------------------------------ MAV_3022|M.avium_104 YDVRVQRLITESDGRVVGMR------------------------------ . . *: * *.*: MSMEG_2873|M.smegmatis_MC2_155 RAVAGAVARGERLRAEAGAEAHASAG-AVILAAGGFINDRDWVSRYAPEF TH_4191|M.thermoresistible__bu GVVSGAVRYAERLRAEASVETETRAG-AVILAAGGFINNRGWVRQYAPQF Mflv_4564|M.gilvum_PYR-GCK GLVNGVVARAERLWAEAAVQTEARAP-SVILAAGGFIFNREWVQAHAPKF MMAR_0205|M.marinum_M PLRNLMERRLRALERRYARAVQIRARRGVIVCAGGFIANSEWIKRYAPRY MUL_4900|M.ulcerans_Agy99 PLRNLMERRLRALERRYARAVQIRARRGVIVCAGGFIANSEWIKRYAPRY MAB_0623|M.abscessus_ATCC_1997 PMRKTLEGPAYALERRFAKPFEIRADDGVILSSGGFIANRELVRRHAPAY Mb1848|M.bovis_AF2122/97 -------------WKRFSETGAIKAKS-VIIAAGGFVMNPDMVAKYTPKL Rv1817|M.tuberculosis_H37Rv -------------WKRFSETGAIKAKS-VIIAAGGFVMNPDMVAKYTPKL Mvan_3165|M.vanbaalenii_PYR-1 -------------WKHFTETGEVKAKS-VVIAAGGFAMNAEMVAEYTPAL MAV_3022|M.avium_104 -------------ARRYGTEMNIRARTGVVLATGSFAYNDSMVARYAPRI . * *::.:*.* : : ::* MSMEG_2873|M.smegmatis_MC2_155 LKI-----------SPLGTVGDDGTGIRLGLDAGGVTDKMGNVTAWRFLS TH_4191|M.thermoresistible__bu LKI-----------SPLGTVGDDGTGIRLGLDAGGKTDKMGNVTAWRFLS Mflv_4564|M.gilvum_PYR-GCK TKI-----------SPLGTAGDDGNGIALGLDAGGFTDKMGNVAAWRFLA MMAR_0205|M.marinum_M VTG-----------LQLGTSGDDGSGIALAQSVGAVTERMDNVSAWRFIT MUL_4900|M.ulcerans_Agy99 VTG-----------LQLGTSGDDGSGIALAQSVGAVTERMDNVSARRLIT MAB_0623|M.abscessus_ATCC_1997 LDG-----------LELGTAGDDGTALKLAEPLGAATGHLDEISAWRFIV Mb1848|M.bovis_AF2122/97 AEK----------PFVLGNTYDDGLGIRLGVSAGGATQHMDQMFITAPPY Rv1817|M.tuberculosis_H37Rv AEK----------PFVLGNTYDDGLGIRLGVSAGGATQHMDQMFITAPPY Mvan_3165|M.vanbaalenii_PYR-1 AAERKTKHHGTVAPYILGNPNDDGLGIKLGVSAGGVAANLDQLFITAAAY MAV_3022|M.avium_104 AGR-----------PAASIEQHDGQAIRMAQALGADLAHMDATEVAIFID . .** .: :. *. .:. MSMEG_2873|M.smegmatis_MC2_155 PPSAFLEGLTVGADGRRIANEDLYGAAHGNVLMREFGGTGWAIYDAATWR TH_4191|M.thermoresistible__bu PPSAFLEGLTVGADGRRIANEDLYGATHGDVLMREFGGTGWAIYDAATWR Mflv_4564|M.gilvum_PYR-GCK PLSAFLEGLTVGADGRRITNEDLYGATHSNVMMREFGGTGWAIYDARTWA MMAR_0205|M.marinum_M PPSAFISTVMVDQQGQRVIDESRYGAAVGKALVQDHNARAWLVADADLMN MUL_4900|M.ulcerans_Agy99 PPSAFISTVMVDQQGQRVIDESRYGAAVGKALVHDHNARAWLVADADLMN MAB_0623|M.abscessus_ATCC_1997 PPAAFLGSLLVDTKGQRMIDESRYGAALGKEIVRTAGGVGYLVADQPLVK Mb1848|M.bovis_AF2122/97 PPSILLTGIIVNKLGQRFVAEDSYHSRTAGFIMEQPDSAAYLIVDEAHLE Rv1817|M.tuberculosis_H37Rv PPSILLTGIIVNKLGQRFVAEDSYHSRTAGFIMEQPDSAAYLIVDEAHLE Mvan_3165|M.vanbaalenii_PYR-1 PPEILLTGVIVNKDGQRFVAEDSYHSRTSAFVLEQPEQTAYLIVDEDHMQ MAV_3022|M.avium_104 P-QQLVRGILVNGRGQRYVAEDTYPGRIGQLTLYQQDNTAYLIIDGDAQD * :: : *. *:* *. * . . : .: : * MSMEG_2873|M.smegmatis_MC2_155 KIKDQITEQTQVFQRLQIWYLRTIGHKKAATIEGIAAKNGIDAAALRKTV TH_4191|M.thermoresistible__bu KIRTQITDQTQVFQRLQVWYLLTIGHKKAATIADLARKNGIDAAGLQQTV Mflv_4564|M.gilvum_PYR-GCK KIRGQVRTQTQLFQRLQLIYLFTTGHRKSSTLEGLARKNGIDPAGLRRTV MMAR_0205|M.marinum_M EARRQMLKQPLWFQRAQAAALMVADSVRAETLARVARKAGVDPDGLQATV MUL_4900|M.ulcerans_Agy99 EARRQMLKQPLWFQRAQAAALMVADSVRAETLADVARKAGVEPDGLQATV MAB_0623|M.abscessus_ATCC_1997 RARQQLGSQTLWFQRIQAEAFLNVGRKKAGSIEELAAKAGIDPEGLARTV Mb1848|M.bovis_AF2122/97 H----------------PKMPLVPLIDGWETVVEMEAALGIPPGNLAATL Rv1817|M.tuberculosis_H37Rv H----------------PKMPLVPLIDGWETVVEMEAALGIPPGNLAATL Mvan_3165|M.vanbaalenii_PYR-1 M----------------PEMPLIKFVDGFETIAEIESALGIPDGNLAATL MAV_3022|M.avium_104 EA----------MASWSPKLMLRPATWVADTVADLERDMALPPGSLQDTV :: : .: * *: MSMEG_2873|M.smegmatis_MC2_155 DEYNRGIAGGAGDPAHKDPSLCSPMERGPFYSIDISADSSLFYPIPGLTL TH_4191|M.thermoresistible__bu DEYNRGISSGAGDPGHKHPSLCPPLERGPFYSINISADASLFYPIPGLTL Mflv_4564|M.gilvum_PYR-GCK DAYNSGIVSGTGDPAHKDPGLCAPMTTGPFYSIDISAASSMFYPVPGLTL MMAR_0205|M.marinum_M DAHNSAIDAAATDPAGKPAEFVRRVARAPFTLLNISVRPSLLNPTPMLTL MUL_4900|M.ulcerans_Agy99 DAHNNVIDAAATDPAGKPAEFVRRVARAPFTLLNIAVRPSLLNPTPMLTL MAB_0623|M.abscessus_ATCC_1997 SEHNRAIAGGTPDPLGKPDDIRVPIERAPFYLFNVSIKTNMLNPCPMLTL Mb1848|M.bovis_AF2122/97 DRYNAYAARGADPDFHKQPEFLAAQDNGPWGAFDMSLGKAMYA---GFTL Rv1817|M.tuberculosis_H37Rv DRYNAYAARGADPDFHKQPEFLAAQDNGPWGAFDMSLGKAMYA---GFTL Mvan_3165|M.vanbaalenii_PYR-1 ECYNANAAAGVDPDFHKQPEYLAAQDKGPWAVFDLSLGRAMYS---GFTM MAV_3022|M.avium_104 AAYNAGAARGEDPLLHKKPEWIRPIG-SPVGAVDL---RESTG---GFTL :* . * .* .:: :*: MSMEG_2873|M.smegmatis_MC2_155 GGLVVDEDTGAVVHRDGGVVPGLYAAGRTAVGVCSNS--YVSGLSISDCV TH_4191|M.thermoresistible__bu GGLVVDEDSGAVVHRDGGVIPGLYAAGRNAVGVCSNS--YVSGLSISDCV Mflv_4564|M.gilvum_PYR-GCK GGLVVDEKTGEVMHRAGGTVAGLYAVGRTAVGICSNS--YVSGLSLSDCV MMAR_0205|M.marinum_M GGIKVDEQTGAVLDASGAAIPGLFGAGRTATGICSNS--YVSGLSIADCV MUL_4900|M.ulcerans_Agy99 GGIKVDEQTGAVLDASGAAIPGLFGAGRTATGICSNS--YVSGLSIADCV MAB_0623|M.abscessus_ATCC_1997 GGLVVDEETGAVQTTSGAAIPGLYAAGRAAVGICSNS--YVSGLSLADCV Mb1848|M.bovis_AF2122/97 GGLATSVD-GQVLRDDGAVVAGLYAVGACASNIAQDGKGYASGTQLGEGS Rv1817|M.tuberculosis_H37Rv GGLATSVD-GQVLRDDGAVVAGLYAVGACASNIAQDGKGYASGTQLGEGS Mvan_3165|M.vanbaalenii_PYR-1 GGLTVSID-GEVLREDGSAIPGLYAAGACACNIAQDGKGYASGTQLGEGS MAV_3022|M.avium_104 GGLATTLD-AEVLHVSGQPIPGLFAAGRCTAGLAAWG--YASGISLGDGS **: . . . * * :.**:..* : .:. . *.** .:.: MSMEG_2873|M.smegmatis_MC2_155 FSGRRAGADAVAKI-------------------------------- TH_4191|M.thermoresistible__bu FSGRRAGAHAAGGTR------------------------------- Mflv_4564|M.gilvum_PYR-GCK FSGRRAGAHAAG---------------------------------- MMAR_0205|M.marinum_M FSGRRAGNHAAIE--------------------------------- MUL_4900|M.ulcerans_Agy99 FSGRRAGTHAASAALE------------------------------ MAB_0623|M.abscessus_ATCC_1997 FSGRRAGTETGRRIDA------------------------------ Mb1848|M.bovis_AF2122/97 FFGRRAGAHAAARAQGM----------------------------- Rv1817|M.tuberculosis_H37Rv FFGRRAGAHAAARAQGM----------------------------- Mvan_3165|M.vanbaalenii_PYR-1 FFGRRAGEAAARRAGEAAARRAGEAAARRAGEAAARRAGEAAAERA MAV_3022|M.avium_104 FYGRRAGASAAGCRLPRV---------------------------- * ***** :