For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSSAERVTEAVATVRIDLDGDRHQLRWPRDKTLVEIMLDAGIAVPYSCREGHCGSCVTTVTSGEVSMDTC DILDEADLADGLVLACQARPVDDDITVEY
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4547 | - | - | 100% (99) | ferredoxin |
M. gilvum PYR-GCK | Mflv_1462 | - | 6e-24 | 45.45% (88) | ferredoxin |
M. gilvum PYR-GCK | Mflv_2391 | - | 2e-15 | 41.05% (95) | ferredoxin |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3602 | hmp | 3e-25 | 48.35% (91) | hemoglobine-like protein |
M. tuberculosis H37Rv | Rv3571 | hmp | 3e-25 | 48.35% (91) | hemoglobine-like protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0583c | - | 3e-21 | 42.86% (91) | putative oxidoreductase |
M. marinum M | MMAR_5066 | hmp | 2e-25 | 46.32% (95) | flavodoxin reductase Hmp |
M. avium 104 | MAV_0590 | - | 2e-24 | 46.15% (91) | oxidoreductase, electron transfer component |
M. smegmatis MC2 155 | MSMEG_2893 | - | 3e-28 | 61.36% (88) | oxidoreductase, NAD/FAD-binding |
M. thermoresistible (build 8) | TH_1743 | - | 7e-26 | 48.35% (91) | POSSIBLE HEMOGLOBINE-RELATED PROTEIN HMP |
M. ulcerans Agy99 | MUL_4142 | hmp | 1e-25 | 46.32% (95) | flavodoxin reductase Hmp |
M. vanbaalenii PYR-1 | Mvan_2893 | - | 1e-24 | 53.41% (88) | ferredoxin |
CLUSTAL 2.0.9 multiple sequence alignment Mb3602|M.bovis_AF2122/97 MTEAIG----DEPLGDHVLELQIAEVVDETDEARSLVFAVPDGSDDPEIP Rv3571|M.tuberculosis_H37Rv MTEAIG----DEPLGDHVLELQIAEVVDETDEARSLVFAVPDGSDDPEIP MMAR_5066|M.marinum_M MTDAIP----DEPLGSHVLELQIAEVVAETDDARSLVFAVPDGSDDPRIP MUL_4142|M.ulcerans_Agy99 MTDAIP----DEPLGSHVLELQIAEVVAETDDARSLVFAVPDGSDDPRIP MAV_0590|M.avium_104 MTEADSAQALDEPLGDHVLELQIAEVIAETDDARSLVFAVPDDDGDPDIP TH_1743|M.thermoresistible__bu ----VT----DEPLGSHVLELQVAEVVEETADARSLVFTVPDG---VDIP MAB_0583c|M.abscessus_ATCC_199 ----MT----DVPLGKHVLEVRIAEVIEETADSRSLVFEIPDG------A MSMEG_2893|M.smegmatis_MC2_155 ----MS----DVESSTRIARLTVTEVIDESHDARSLVFAVPDEH------ Mvan_2893|M.vanbaalenii_PYR-1 ----ML----PMSDASRAVPLTVTEVIEESRDAISLVFSVPGEH------ Mflv_4547|M.gilvum_PYR-GCK -------------------------------------------------- Mb3602|M.bovis_AF2122/97 PRRLRYAPGQFLTLRVPSERTGSVARCYSLCSSPYTDDALAVTVKRTADG Rv3571|M.tuberculosis_H37Rv PRRLRYAPGQFLTLRVPSERTGSVARCYSLCSSPYTDDALAVTVKRTADG MMAR_5066|M.marinum_M PERLRYAPGQFLTLRVPSERTGSVARCYSLCSSPFTDDALTVTVKRTADG MUL_4142|M.ulcerans_Agy99 PERLRYAPGQFLTLRVPSERTGSVARCYSLCSSPFTDDALTVTVKRTADG MAV_0590|M.avium_104 PERLRYAPGQFLTLRVPSERTGSVARCYSLCSSPFTDDALTVTVKRTADG TH_1743|M.thermoresistible__bu PERLRYAPGQFLTLRVPSDRTGSVARCYSLCSSPFTGDPMTVTVKRTEDG MAB_0583c|M.abscessus_ATCC_199 ADKFAYAPGQYLTLRIPSDRTGSVARCYSLSSSPHLDDRLAVTVKRTADG MSMEG_2893|M.smegmatis_MC2_155 RDHFGYRPGQFLTLRIPSERTGSVARCYSLASSPHTDDAHKVTVKRTDGG Mvan_2893|M.vanbaalenii_PYR-1 RDRFGYRPGQFLTLRIPSEQTGSVARCYSLASSPHTDDAPKVTVKRTDGG Mflv_4547|M.gilvum_PYR-GCK -------------------------------------------------- Mb3602|M.bovis_AF2122/97 YASNWLCDHAQVGMRIHVLAPSGNFVPTTLDADFLLLAAGSGITPIMSIC Rv3571|M.tuberculosis_H37Rv YASNWLCDHAQVGMRIHVLAPSGNFVPTTLDADFLLLAAGSGITPIMSIC MMAR_5066|M.marinum_M YASNWLCDNAHQGMRIHVLAPSGNFVPKTLDDDFLLLAAGSGITPIMSIC MUL_4142|M.ulcerans_Agy99 YASNWLCDNAHQGMRIHVLAPSGNFVPKTLDDDFLLLAAGSGITPIMSIC MAV_0590|M.avium_104 YASNWLCDNARPGMRIHVLAPSGNFVPKTLGDDFLLMAAGSGITPIMSIA TH_1743|M.thermoresistible__bu YASNWLCDNAHPGMRIHVLAPSGTFVPKSLDADFLLLAAGSGITPMMAIC MAB_0583c|M.abscessus_ATCC_199 YGSNWICDNAHAGMHMHVLAPSGVFVPKQLDNDFLLLAGGSGVTPMMAIC MSMEG_2893|M.smegmatis_MC2_155 YGSNWLCDNVSVGSTIESLPPSGVFTPASLDDDFLLWAAGSGITPVMSIL Mvan_2893|M.vanbaalenii_PYR-1 YGSNWLCDNVSVGATLESLPPSGLFTPRDLDADFLLWAAGSGITPVMSIL Mflv_4547|M.gilvum_PYR-GCK -------------------------------------------------- Mb3602|M.bovis_AF2122/97 KSALAEGGGQVTLLYANRDDRSVIFGDALRELAAKYPDRLTVLHWLESLQ Rv3571|M.tuberculosis_H37Rv KSALAEGGGQVTLLYANRDDRSVIFGDALRELAAKYPDRLTVLHWLESLQ MMAR_5066|M.marinum_M KSTLAEGSGQVTLLYANRDERSVIFADALRELSAKYPDRLTVVHWLESLQ MUL_4142|M.ulcerans_Agy99 KSALAEGGGQVTLLYANRDERSVIFADALRELSAKYPDRLTVVHWLESLQ MAV_0590|M.avium_104 KSALSEGSGRVTLLYANRDERSVIFADALRELSAKYPDRLTVLHWLESLQ TH_1743|M.thermoresistible__bu KSALAEGSGQVVLVYANRDENSVIFSAALRDLAAKYPDRLTVVHWLESVQ MAB_0583c|M.abscessus_ATCC_199 KSALSQGSGKVVLIYANRDEQSVIFGAALRELAAKYPDRLTVIHWLESVQ MSMEG_2893|M.smegmatis_MC2_155 KSVLSAGSGRVILCYANRDERSVIFAAELRELAARHAGRLTVLHWLESVQ Mvan_2893|M.vanbaalenii_PYR-1 KSVLTAGTGRVVLCYANRDEASVIFAAELRDLAARYAGRFTVLHWLESIQ Mflv_4547|M.gilvum_PYR-GCK -------------------------------------------------- Mb3602|M.bovis_AF2122/97 GLPSASALAKLVAPYTDRPVFICGPGPFMQAARDALAALKVPAQQVHIEV Rv3571|M.tuberculosis_H37Rv GLPSASALAKLVAPYTDRPVFICGPGPFMQAARDALAALKVPAQQVHIEV MMAR_5066|M.marinum_M GLPSATALAQLAAPFTGRTAFICGPGPFMEAARVALQTLDVPAGQVHIEV MUL_4142|M.ulcerans_Agy99 GLPSATALAQLAAPFTGRTAFICGPGPFMEAARVALQTLDVPAGQVHIEV MAV_0590|M.avium_104 GLPSVTALAQLAAPYTDRPVYICGPGAFMDSAREALETLKVPAAQIHIEV TH_1743|M.thermoresistible__bu GLPTVAALTGLVRPYAAHDAFICGPAPFMAAAEEALTNVGAPADRIHIEV MAB_0583c|M.abscessus_ATCC_199 GLPSQQQLATLTAPFAEHEAFICGPGPFMDASEAALKGNGMPHDRVHIEV MSMEG_2893|M.smegmatis_MC2_155 GLPTRAQLCGFAQLFSGYESFICGPEPFMAVVRAALTEAGVPRRRIHLEV Mvan_2893|M.vanbaalenii_PYR-1 GLPSHAQLSNFARLFTGYQSFICGPAPYMAVVKETLTDVGIPRDHIHLEV Mflv_4547|M.gilvum_PYR-GCK ----------------------------MSSAERVT-------------- * . . Mb3602|M.bovis_AF2122/97 FKSLESDPFAA--VKVD--DSG--DEAPATAVVELDGQTHTVSWPRTAKL Rv3571|M.tuberculosis_H37Rv FKSLESDPFAA--VKVD--DSG--DEAPATAVVELDGQTHTVSWPRTAKL MMAR_5066|M.marinum_M FKSLESDPFAA--VTVE--DSA--AEPPATAVVELDGQTHTVSWPRSAKL MUL_4142|M.ulcerans_Agy99 FKSLESDPFAA--VTVE--DSA--AEPPATAVVELDGQTHTVSWPRSAKL MAV_0590|M.avium_104 FKSLDSDPFAA--VKIE--DTAEGDEPPATAVVELDGETHTVSWPRNAKL TH_1743|M.thermoresistible__bu FKSLESDPFAT--VVVDYDEAGEGGEGPATAIVTLDGQTHEVTWPRSAKL MAB_0583c|M.abscessus_ATCC_199 FRSLESDPFAE--VVLA--EPSDDDEPPATATVELDGETHEVSWPRSTVL MSMEG_2893|M.smegmatis_MC2_155 FQSLSGDPFAEDVPASGPAGPGTDAG-AAEAEIELDGTVHQLRWPRDRNL Mvan_2893|M.vanbaalenii_PYR-1 FQSLHGDPFAD-----VPVEPFPDEGQAAEAEISIDGRVHHLRWPVGRNL Mflv_4547|M.gilvum_PYR-GCK -------------------------EAVATVRIDLDGDRHQLRWPRDKTL * . : :** * : ** * Mb3602|M.bovis_AF2122/97 LDVLLAAGLDAPFSCREGHCGACACTLRAGKVNMGVNDVLEQQDLDEGLI Rv3571|M.tuberculosis_H37Rv LDVLLAAGLDAPFSCREGHCGACACTLRAGKVNMGVNDVLEQQDLDEGLI MMAR_5066|M.marinum_M LDVLLAAGLDAPFSCREGHCGACAATLRSGKVNMEVNDVLEQQDLDDGLI MUL_4142|M.ulcerans_Agy99 LDVLLAAGLDAPFSCREGHCGACAATLRSGKVNMEVNDVLEQQDLDDGLI MAV_0590|M.avium_104 LDVLLAKGLDAPFSCREGHCGACACTLRKGQVSMEVNDVLEQQDLDEGLI TH_1743|M.thermoresistible__bu LDVLLDKGLDAPFSCREGHCGACAVVKKSGEVEMEVNDVLEQSDLDEGLI MAB_0583c|M.abscessus_ATCC_199 LDVLLAKGLDAPFSCREGHCMTCACVLKDGKVRMLVNDALSQNDIDDGYI MSMEG_2893|M.smegmatis_MC2_155 VDTMLAAGVEVPYSCREGSCGSCAATVLDGEIERGDTPILDAQDIADGLF Mvan_2893|M.vanbaalenii_PYR-1 VDTMMAAGIEVPYSCREGNCGSCAATVIDGQVDLGNAAILEEQDIADGLF Mflv_4547|M.gilvum_PYR-GCK VEIMLDAGIAVPYSCREGHCGSCVTTVTSGEVSMDTCDILDEADLADGLV :: :: *: .*:***** * :*. . *:: *. *: :* . Mb3602|M.bovis_AF2122/97 LACQSRPESDSVEVTYDE Rv3571|M.tuberculosis_H37Rv LACQSRPESDSVEVTYDE MMAR_5066|M.marinum_M LACQSHPESDSVEVTYDE MUL_4142|M.ulcerans_Agy99 LACQSHPESDSVEVTYDE MAV_0590|M.avium_104 LACQSHPESDSVEVTYDD TH_1743|M.thermoresistible__bu LGCQARPLSDSVEVTYDE MAB_0583c|M.abscessus_ATCC_199 LACQAVPETDDVNVTFDE MSMEG_2893|M.smegmatis_MC2_155 LACQARPVSDRIRIEF-- Mvan_2893|M.vanbaalenii_PYR-1 LACQACPLSDTVKIEF-- Mflv_4547|M.gilvum_PYR-GCK LACQARPVDDDITVEY-- *.**: * * : : :