For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SDPLEESSDAAPRSGRRRPRWQAVAGVVAVLCSAAMVTAGGVIWSEHRDAVRGQQSRVEFAAAAEQVAVT LMSLDHADPQTGVQRILDNSVDPFLSEFRSTTGDFVKLSKDAEVTTKAVANAAAVQSISGDAAVVLVAAT STVTNADGVTEAPRSWQLKLDLRRDGDRIKMSKVEFLQ*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_4529 | - | - | 100% (179) | hypothetical protein Mflv_4529 |
| M. gilvum PYR-GCK | Mflv_2526 | - | 3e-36 | 43.65% (181) | hypothetical protein Mflv_2526 |
| M. gilvum PYR-GCK | Mflv_2107 | - | 3e-15 | 28.16% (174) | hypothetical protein Mflv_2107 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1398c | - | 1e-28 | 37.70% (183) | hypothetical protein Mb1398c |
| M. tuberculosis H37Rv | Rv1363c | - | 9e-29 | 37.70% (183) | hypothetical protein Rv1363c |
| M. leprae Br4923 | MLBr_02614 | - | 3e-05 | 19.77% (177) | hypothetical protein MLBr_02614 |
| M. abscessus ATCC 19977 | MAB_1004c | - | 2e-07 | 22.86% (175) | hypothetical protein MAB_1004c |
| M. marinum M | MMAR_4687 | - | 9e-33 | 41.34% (179) | hypothetical protein MMAR_4687 |
| M. avium 104 | MAV_0938 | - | 5e-31 | 39.11% (179) | hypothetical protein MAV_0938 |
| M. smegmatis MC2 155 | MSMEG_2864 | - | 2e-50 | 55.37% (177) | hypothetical protein MSMEG_2864 |
| M. thermoresistible (build 8) | TH_0392 | - | 2e-34 | 44.00% (175) | POSSIBLE MEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_0306 | - | 6e-33 | 41.34% (179) | hypothetical protein MUL_0306 |
| M. vanbaalenii PYR-1 | Mvan_2860 | - | 5e-63 | 71.43% (168) | hypothetical protein Mvan_2860 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4529|M.gilvum_PYR-GCK -----------------------------MS---------DPLEESSD--
Mvan_2860|M.vanbaalenii_PYR-1 -----------------------------MSKSEAP-LRADRLEESADLS
MSMEG_2864|M.smegmatis_MC2_155 ----------------------------MLSTTERVGTDADLLAEKAEAE
MMAR_4687|M.marinum_M MHAALLSGGCGVSTGIGNGAADSRSAPVDEDEIGGTAAEMRALAEEAEAE
MUL_0306|M.ulcerans_Agy99 ---------------------------MDEDEIGGTAAEMRALADEAEAE
Mb1398c|M.bovis_AF2122/97 ----------------------MAETTEPPSDAGTSQADAMAL--AAEAE
Rv1363c|M.tuberculosis_H37Rv ----------------------MAETTEPPSDAGTSQADAMAL--AAEAE
MAV_0938|M.avium_104 ----------------------MADAKKPPHDSATSDEDVKALLEEAEAE
TH_0392|M.thermoresistible__bu --------------------------------------------------
MAB_1004c|M.abscessus_ATCC_199 ---------------------------MVTMTKEDVDSTNDADTDTADDK
MLBr_02614|M.leprae_Br4923 ------------------------------MNWPKTPGTLAAMPDEEQTE
Mflv_4529|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2860|M.vanbaalenii_PYR-1 ELTPEQLAGLLEQPEAAVAAADEVAEAAR---------------------
MSMEG_2864|M.smegmatis_MC2_155 AAEAESAAAAAR--ERASRLRQQAGAAAA---------------------
MMAR_4687|M.marinum_M AAEAEALAAAAGARARALQLRRRAERAEAAAEVDAACEATHEGAADGQAT
MUL_0306|M.ulcerans_Agy99 AAEAEAVAAAAGARARALQLRRRAERAEAAAEVDAACEATHEGAADGQAT
Mb1398c|M.bovis_AF2122/97 AAEAEALAAAARARARAARLKREALAMAP-------------------AE
Rv1363c|M.tuberculosis_H37Rv AAEAEALAAAARARARAARLKREALAMAP-------------------AE
MAV_0938|M.avium_104 AAEAEALAAAARARARAARLRREAQAQAAKAAAETSEADEHA------AD
TH_0392|M.thermoresistible__bu --------VHWRPXXXAAP-------------------------------
MAB_1004c|M.abscessus_ATCC_199 ETVDSAAETDSEIAEDAASTDTDAASSAD---------------------
MLBr_02614|M.leprae_Br4923 LPVHKEFAGIADYSDPGLS-------------------------------
Mflv_4529|M.gilvum_PYR-GCK --------------------------AAP---------------------
Mvan_2860|M.vanbaalenii_PYR-1 ----------------------ARVHAAR---------------------
MSMEG_2864|M.smegmatis_MC2_155 ----------------------DPAPDRP---------------------
MMAR_4687|M.marinum_M ASHNGAEEPSANSADVLESDDVAETEELSADDDEPAAAGSAEADESEADE
MUL_0306|M.ulcerans_Agy99 ASRNGAEEPTGNSADVLESDDVAETEELRADDDEPVAAGSAKADESEADE
Mb1398c|M.bovis_AF2122/97 DE--NVPEEYADWEDAEDYDDYDDYEAADQEAARSAS-------------
Rv1363c|M.tuberculosis_H37Rv DE--NVPEEYADWEDAEDYDDYDDYEAADQEAARSAS-------------
MAV_0938|M.avium_104 DEPAETDDEVSDSVEATDADDTETTQAQTKEAAKEAEPNEEAAEETAEDA
TH_0392|M.thermoresistible__bu -------------------DSSDTTPAAG---------------------
MAB_1004c|M.abscessus_ATCC_199 ----------------------SDSETASSD-------------------
MLBr_02614|M.leprae_Br4923 --------------------------------------------------
Mflv_4529|M.gilvum_PYR-GCK ------RS---GRRRPRWQAVAGVVAVLCSAAMVTAGGVIWSEHRDAVRG
Mvan_2860|M.vanbaalenii_PYR-1 ------RARTGSRRRSRWQTAAGVVAVLCSVAMVAASGLILFGHRNAVRD
MSMEG_2864|M.smegmatis_MC2_155 ------RRFRVGLSRPRWTTVAAAVALLCTAALLTVGGYLTRDHRKTVHD
MMAR_4687|M.marinum_M LADESERSRRGLLRRPKLSTLTAALAVLVILAALAGSAYMVLQHRDATRQ
MUL_0306|M.ulcerans_Agy99 LADESERSRRGLLRRPKLSTLTAALAVLVILAALAGSAYMVLQHRDATRQ
Mb1398c|M.bovis_AF2122/97 -----WRRRL-RVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATER
Rv1363c|M.tuberculosis_H37Rv -----WRRRL-RVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATER
MAV_0938|M.avium_104 ESESKARSRR-RLRLPSWSVAWKAAVIALICAFVAASGYMMWERHQTSER
TH_0392|M.thermoresistible__bu -----ARRRF-RLR---WGIVARAAAIVAICLLLAASGYMVWYHQQVEAE
MAB_1004c|M.abscessus_ATCC_199 ------EDGDAAKGASWVRYAALGAVAAIMVGALVFSGIFGWKVWQQHQI
MLBr_02614|M.leprae_Br4923 -----------DGSVFSQYGIASTVLAVLSAAAVVFGVVIWRAHHDNSAE
. : .
Mflv_4529|M.gilvum_PYR-GCK QQSRVEFAAAAEQVAVTLMSLDHADPQTGVQRILDNSVDPFLSEFRSTTG
Mvan_2860|M.vanbaalenii_PYR-1 QQNRAEFAAAGKQVAVTLMSIDFNDPQAGVQRIIDNSVDPFRAEFQSSSS
MSMEG_2864|M.smegmatis_MC2_155 ERMRAEYTAAARQVAVSLMSIDHNNADGDVQRIIDNSTGEFRDEFAQASE
MMAR_4687|M.marinum_M RERVAEFAAAARQGVITLTSLDFQDAKQGIGRILDNSTGSFKDELLKSSD
MUL_0306|M.ulcerans_Agy99 RERVAEFAAAARQGVITLTSLDFQDAKQGIGRILDNSTGSFKDELLKSSD
Mb1398c|M.bovis_AF2122/97 QQRAAAFAAGAKQGVINMNSLDFNKAKEDVARVIDSSTGEFRDDFQQRAA
Rv1363c|M.tuberculosis_H37Rv QQRAAAFAAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAA
MAV_0938|M.avium_104 NQRIANFLAAARQGVVNMTSLDFNKAKEDVQRVIDSSTGQFRDDFQQRAK
TH_0392|M.thermoresistible__bu KQRAAEFAAAARQGIVSLMSLDFNRAEEDVQRIIDNSTGEFREEFESAAE
MAB_1004c|M.abscessus_ATCC_199 DAAGEQALAVAIPYTETLTSIDSNDIDESFRKILNGATGDLKKDFTPASV
MLBr_02614|M.leprae_Br4923 RAYLTHVMQTAFDWTGVLINMNTSNVDASLQRLHAGTVGELNTDFDAAVQ
. : .:: . .. :: .:.. : ::
Mflv_4529|M.gilvum_PYR-GCK DFVKLSKDAEVTTKAVANAAAVQ--SISGD-------------------A
Mvan_2860|M.vanbaalenii_PYR-1 DFAKLSADAKVTTKATANVAAVQ--SATAD-------------------S
MSMEG_2864|M.smegmatis_MC2_155 DFVKLAKDAKVTTEATATAAAVE--SMTDD-------------------A
MMAR_4687|M.marinum_M DFIQVVQQAQVVEQGTVQAVAVDRNSMTDD-------------------S
MUL_0306|M.ulcerans_Agy99 DFIQVVQQAQVVEQGTVQAVAVDRNSMTDD-------------------S
Mb1398c|M.bovis_AF2122/97 DFTKVVEQSKVVTEGTVNATAVE--SMNEH-------------------S
Rv1363c|M.tuberculosis_H37Rv DFTKVVEQSKVVTEGTVNATAVE--SMNEH-------------------S
MAV_0938|M.avium_104 DFTTVVEQSKVVTQGTVNAAAVQ--SIDGN-------------------S
TH_0392|M.thermoresistible__bu DFATVAKESKVITDVSVNATAVQ--SMTED-------------------S
MAB_1004c|M.abscessus_ATCC_199 QLRQLLLDNKAASHGKVVNSAIQ--YKSTN-------------------K
MLBr_02614|M.leprae_Br4923 PYRKVVEKLQTQSRGQIEAVAIESVHHDLDTQPGVAHPVVTTKLLPPAAR
: . :. *:: .
Mflv_4529|M.gilvum_PYR-GCK AVVLVAATSTVTNADGVTEAPRSWQLKLDLRRDGDRIKMSKVEFLQ
Mvan_2860|M.vanbaalenii_PYR-1 AVVLVAATSTVTNADGVAEPPRSWQLRVELQRDADRIKMSKVDFLQ
MSMEG_2864|M.smegmatis_MC2_155 AVVLVTVSSTVTDADGAKDAPRNWRLSVDLRRDGDQIKMAKVEFVP
MMAR_4687|M.marinum_M AVVLVASTSEVTNAAGAKKDPRKYRLIVTITRDGDQLKMSKVEFVP
MUL_0306|M.ulcerans_Agy99 AVVLVASTSEVTNAAGAKKDPRKYRLIVTITRDGDQLKMSKVEFVP
Mb1398c|M.bovis_AF2122/97 AVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP
Rv1363c|M.tuberculosis_H37Rv AVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP
MAV_0938|M.avium_104 ALVLVAATSRITNAAGAKDEPRNWRLKVTVTDEGGQYKMSKLEFVP
TH_0392|M.thermoresistible__bu AEVLVAATSSITNEAGANQDPRSWRLFVSVTRDDGQLKMSKVEFVP
MAB_1004c|M.abscessus_ATCC_199 VVLLMMVDQSITNTQRPDPRVDKSRMKITMEKIDGRWLASKLEYL-
MLBr_02614|M.leprae_Br4923 TDSVMLVATSVSENVGGKPTTVHWSLRLDVSDVDGKLMISHLESIR
. :: ::: : : : .: :::: :