For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTNTLPPKRGDRESAVGLQKHRRTAIDVGMALLTPLMGQEFLDKYNLRDPLNRGLKYGVKHGFSAAGAAT RQFKRVQGIGKPATRLTENRPKGSDYFDLTPDDDQKMIVQTVEEFAEEILRPAAHDADDAATYPPDLIAK AAELGITAINIPEDFDGIAEHRSTVTNALVAEALAYGDMGLALPILAPGGVASALTHWGSADQQATYLRE FAGESVPQACLAIAEPHPLFDPTALRTTAVRTPSGYRLDGVKSLVPAAADAELFIIAAALGGKPALFLVE ASTPGLTVTADPSMGIRAAALGRVELAKVTVPLSARLGEEDASAADTAQIYSDAIALSRLGWAALAVGTS HAVLDYVIPYVKEREAFGEPIARRQSVAFMCANIAIELDGLRLITWRGASRAEQGLSFAREAALAKKLGA DKGMQIGLDGVQLLGGHGYTKEHPVERWYRDLRAIGVAEGVVVL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4455 | - | - | 100% (464) | acyl-CoA dehydrogenase domain-containing protein |
M. gilvum PYR-GCK | Mflv_1095 | - | 6e-41 | 31.28% (390) | acyl-CoA dehydrogenase domain-containing protein |
M. gilvum PYR-GCK | Mflv_4943 | - | 3e-39 | 30.05% (366) | acyl-CoA dehydrogenase domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3163 | fadE24 | 0.0 | 81.36% (456) | acyl-CoA dehydrogenase FADE24 |
M. tuberculosis H37Rv | Rv3139 | fadE24 | 0.0 | 81.36% (456) | acyl-CoA dehydrogenase FADE24 |
M. leprae Br4923 | MLBr_00661 | fadE24 | 0.0 | 77.54% (472) | putative acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_3486 | - | 1e-180 | 68.35% (474) | acyl-CoA dehydrogenase |
M. marinum M | MMAR_1510 | fadE24 | 0.0 | 81.57% (472) | acyl-CoA dehydrogenase FadE24 |
M. avium 104 | MAV_4018 | - | 0.0 | 81.40% (457) | putative acyl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_2081 | - | 0.0 | 82.41% (449) | putative acyl-CoA dehydrogenase |
M. thermoresistible (build 8) | TH_3828 | - | 0.0 | 77.54% (472) | PUTATIVE acyl-CoA dehydrogenase domain protein |
M. ulcerans Agy99 | MUL_2431 | fadE24 | 0.0 | 80.30% (472) | acyl-CoA dehydrogenase FadE24 |
M. vanbaalenii PYR-1 | Mvan_1907 | - | 0.0 | 87.28% (464) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4455|M.gilvum_PYR-GCK MTNTLP-----------PKRGDRESAVGLQKHRRTAIDVGMALLTPLMGQ Mvan_1907|M.vanbaalenii_PYR-1 MTNTLP-----------SKRGGRESAVGLQTHKRSVTDIGLALITPIVGQ MSMEG_2081|M.smegmatis_MC2_155 --------------------------MGLQKHKRTATDIGLALITPIVGQ Mb3163|M.bovis_AF2122/97 MTNTTSAANAAKPSGARTDRRGRTTGVGLAPHKRTGIDVALALLTPIVGQ Rv3139|M.tuberculosis_H37Rv MTNTTSAANAAKPSGARTDRRGRTTGVGLAPHKRTGIDVALALLTPIVGQ MLBr_00661|M.leprae_Br4923 MTDT---APSAKPSSVRLKRGGLRSGVGMQPHKRTGFDVAIAMLTPLVGQ MAV_4018|M.avium_104 MTDS---GSTKTP--ARVKRRDRQSGVGLQPHKRTGIDIAIALLTPLVGQ MMAR_1510|M.marinum_M MTETLP-APSAKRSRSRDDR---QTSLGMQPHKRTGIDVALAFLTPIIGQ MUL_2431|M.ulcerans_Agy99 MTETLP-APSAKRSRSRDDR---QTSLGMQPHKRTGIDVALAFLTPIIGQ TH_3828|M.thermoresistible__bu MTNTLP---STNGSTPRRKRTGPESAVGLQRHKRTATDIGLALITPLVGQ MAB_3486|M.abscessus_ATCC_1997 MTNTLT-PRDEKKAAKSKSLAKHETGVGLQKHKRGAIDILIAVLTPIAGS :*: *:* *: :*.:**: *. Mflv_4455|M.gilvum_PYR-GCK EFLDKYNLRDPLNRGLKYGVKHGFSAAGAATRQFKRVQGIGKP-ATRLTE Mvan_1907|M.vanbaalenii_PYR-1 EFLDRYNLREPLNRGIRYGVKHAFSAAGASTRQFKRIQGLGKP-ATRLEA MSMEG_2081|M.smegmatis_MC2_155 EWLDRYGLRDPLNRGLKYGVKQVFSTAGATTRQFKRIQGIGKA-PTRLKA Mb3163|M.bovis_AF2122/97 EFLDKYRLRDPLNRSLRYGVKTMFATAGAATRQFQRVQGLRGG-PTRLKS Rv3139|M.tuberculosis_H37Rv EFLDKYRLRDPLNRSLRYGVKTMFATAGAATRQFQRVQGLRGG-PTRLKS MLBr_00661|M.leprae_Br4923 DFLDKYHLRYPLNRALRYGVKATFSTAAATSRQFKRVQNLRGG-ATRLQP MAV_4018|M.avium_104 EFLDKYHLRDPLNRGLRYGTKTIFSTGAATSRQFKRVQNLRGG-PTRLKS MMAR_1510|M.marinum_M EFLDKYNLRDPLNRGLRYGVKTMFSTSGKANRQFQRVQNLRGGGPVRLKS MUL_2431|M.ulcerans_Agy99 EFLDKYTLRDPLNRGLRYGVKTMFSTSGKANRQFQRVQNLRGGGPVRLKS TH_3828|M.thermoresistible__bu EFLDKYNLRDPLNRALRYGVKTAFSTAGAATRQFKRVQGLRGE-PTRLKP MAB_3486|M.abscessus_ATCC_1997 ELLDKYNLRGAFNKGIFESTKGLFTTLGVANRTFKKVTGSKGG-PKRLDK : **:* ** .:*:.: ..* *:: . :.* *::: . . ** Mflv_4455|M.gilvum_PYR-GCK NRPKGSDYFDLTPDDDQKMIVQTVEEFAEEILRPAAHDADDAATYPPDLI Mvan_1907|M.vanbaalenii_PYR-1 HRPQGSDYFDLTPDEDQKMIVETVEEFAEEILRPAAYDADDAASYPPDLI MSMEG_2081|M.smegmatis_MC2_155 S---GADLFDLTPDDDQKMIVETVNEFAAEILRPAAEEADEAATYPPDLI Mb3163|M.bovis_AF2122/97 S---GRDYFDLTPDDDQKLIIETVDEFAEEVLRPAAHDADDAATYPSDLT Rv3139|M.tuberculosis_H37Rv S---GRDYFDLTPDDDQKLIIETVDEFAEEVLRPAAHDADDAATYPSDLT MLBr_00661|M.leprae_Br4923 S---GRNYFDLTPDDNQKLIVETIDEFSAEILRPAAHDADEAAAYPPDLI MAV_4018|M.avium_104 S---GKDYFDLTPDDEQKMIVETLDEFAAEVLRPAAHDADEAATYPRDLI MMAR_1510|M.marinum_M S---GKDYFDLTPDDDQKMIVETVQEFAAEILRPAAHDADEAISYPADLI MUL_2431|M.ulcerans_Agy99 S---GKDYFDLTPDDDQKMIVETVQEFAAEILRPAAHDADEAISYPADLI TH_3828|M.thermoresistible__bu S---GSDYFDLTPDDEQQMIVDTVSEFAKEVLRPAAREADDAARFPADLM MAB_3486|M.abscessus_ATCC_1997 A---NADYFDLNPEDEQKMIADTVKEFAVEVIRPAAYESDKNKTYPADLL . : ***.*:::*::* :*:.**: *::**** ::*. :* ** Mflv_4455|M.gilvum_PYR-GCK AKAAELGITAINIPEDFDGIAEHRSTVTNALVAEALAYGDMGLALPILAP Mvan_1907|M.vanbaalenii_PYR-1 AKAAELGITAINVPEDFDGIAEHRTTVTGALVAEALAYGDMGLALPILAP MSMEG_2081|M.smegmatis_MC2_155 AKAAELGITAVNVPEDFEGIAEHRSTVTNALVAEALAYGDMGLALPILAP Mb3163|M.bovis_AF2122/97 AKAAELGITAINIPEDFDGIAEHRSSVTNVLVAEALAYGDMGLALPILAP Rv3139|M.tuberculosis_H37Rv AKAAELGITAINIPEDFDGIAEHRSSVTNVLVAEALAYGDMGLALPILAP MLBr_00661|M.leprae_Br4923 AKAAKLGITTINIPEYFDGIAERRSSVTNVLVAEALAYGDMGLTLPILAP MAV_4018|M.avium_104 AKAAELGITAINIPEDFDGIAAHRSSVTNVLVAEALAYGDMGLALPLLAP MMAR_1510|M.marinum_M AKAAELGITAINIPEDFDGIAEQRSTVTNALVAEALAYGDMGLALPILAP MUL_2431|M.ulcerans_Agy99 AKAAELGITAINIPEDFDGIAEQRSTVTNALVAEALAYGDMGLALSILAP TH_3828|M.thermoresistible__bu GKAAELGITALNIPENFDGIAAHRSTVTSALVAEALAYGDMGLALPILAP MAB_3486|M.abscessus_ATCC_1997 GKVAELGVTAINIPEDFDGIASQRSTVTNSLVAEALSYGDMGLALPILAP .*.*:**:*::*:** *:*** :*::**. ******:******:*.:*** Mflv_4455|M.gilvum_PYR-GCK GGVASALTHWGSADQQATYLREFAGESVPQACLAIAEPHPLFDPTALRTT Mvan_1907|M.vanbaalenii_PYR-1 GGVASALTHWGSADQQATYLKEFSGDNVPQACVAIAEPHPLFDPTALKTT MSMEG_2081|M.smegmatis_MC2_155 GGVASALTHWGSADQQATYLKEYAGDNVPQSSVVIAEPHALFDPTELKTT Mb3163|M.bovis_AF2122/97 GGVASALTHWGSADQQATYLKEFAGENVPQACVAITEPQPLFDPTRLKTT Rv3139|M.tuberculosis_H37Rv GGVASALTHWGSADQQATYLKEFAGENVPQACVAITEPQPLFDPTRLKTT MLBr_00661|M.leprae_Br4923 GGVAATLTYWGSADQQATYLKEFTGENVPQACVAIAEPQPLFDPTRLKTI MAV_4018|M.avium_104 GGVASALTHWGSAEQQATYLPEFAGENVPQACVAIAEPQPLFDPTRLKTS MMAR_1510|M.marinum_M GGVASALTHWGSADQQATYLSEFAGENVPQACVAIAEPQPLFDPTRLKTT MUL_2431|M.ulcerans_Agy99 GGVASALTHWGSADQQATYLSEFAGDNVPQACVAITEPQPLFDPTRLKTT TH_3828|M.thermoresistible__bu GGVAAALTHWGSADQQATYLPEYAGENVPQSAVVIAEPQPLFDPTMLKTT MAB_3486|M.abscessus_ATCC_1997 SGVASALTNWGSADQQATYLKEFAGENVPQASVVIAEPQALFDPFSLKTT .***::** ****:****** *::*:.***:.:.*:**:.**** *:* Mflv_4455|M.gilvum_PYR-GCK AVRTPSGYRLDGVKSLVPAAADAELFIIAAALGGKPALFLVEASTPGLTV Mvan_1907|M.vanbaalenii_PYR-1 AVRTPSGYRLDGVKSLVPAAADAEVFIIAAQLNGKPALFIVEASTKGLTV MSMEG_2081|M.smegmatis_MC2_155 AVRTPSGYRLSGVKSLVPAAADAELFIVAAQFNGKPALFIVEASSKGLSV Mb3163|M.bovis_AF2122/97 AVRTPSGYRLDGVKSLIPAAADAELFIVGAQLGGKPALFIVESAASGLTV Rv3139|M.tuberculosis_H37Rv AVRTPSGYRLDGVKSLIPAAADAELFIVGAQLGGKPALFIVESAASGLTV MLBr_00661|M.leprae_Br4923 AVRTPSGYRLDGVKSLVPAAASAELFIIGAQLNGKPALFIVESSTKGLTV MAV_4018|M.avium_104 AVRTPSGYRLDGVKSLVPAAADAELFIVGAQLDGKPALFIVESSTKGLTV MMAR_1510|M.marinum_M AVRTPSGYRLDGVKSLVPAAADAELFIVAAQLDGKPALFIVESSAAGLTV MUL_2431|M.ulcerans_Agy99 AVRTPSGYRLDGVKSLVPAAADAELFIVAAQLDGKPALFIVESSAAGLIV TH_3828|M.thermoresistible__bu AVRTPSGYRLHGVKSLVPAAADAELFIVGAQLSGRPTLFIVESDTAGLSV MAB_3486|M.abscessus_ATCC_1997 ATRTPSGFRLNGTKSLVPAAAQAELFIVAANYNGRPTLFIVESGTEGITV *.*****:** *.***:****.**:**:.* .*:*:**:**: : *: * Mflv_4455|M.gilvum_PYR-GCK TADPSMGIRAAALGRVELAKVTVPLSARLGEEDASAADTAQIYSDAIALS Mvan_1907|M.vanbaalenii_PYR-1 TPDPSMGIRAAALGRVELDKVTVPLSARLGEEDATDAD----YSEAIALS MSMEG_2081|M.smegmatis_MC2_155 KADRSMGLRAAALGQIELDNVTVPLSARLGEDGATDQD----YSEAIALA Mb3163|M.bovis_AF2122/97 KADPSMGIRGAALGQVELCGVSVPLNARLGEDEASDND----YSEALALA Rv3139|M.tuberculosis_H37Rv KADPSMGIRGAALGQVELCGVSVPLNARLGEDEASDND----YSEALALA MLBr_00661|M.leprae_Br4923 KADPSMGIRAAALGQVELCGVSAPLDARLGEDDATDND----YSEAIALA MAV_4018|M.avium_104 KADPSMGIRAAELGHVELSGVTVPLGARLGEDEATDDD----YSEAIALS MMAR_1510|M.marinum_M KADPSMGIRAAALGQIELSKVSVPLSARLGEDQATDAD----YSEAIALA MUL_2431|M.ulcerans_Agy99 KADPSMGIRAAALGQIELSKVSVPLRARLGEDQATDAD----YSEAIALA TH_3828|M.thermoresistible__bu KADPSMGLRPAALGRLQLDNVTVPLSARLGEDVSEQEHDQN-YSEAVALA MAB_3486|M.abscessus_ATCC_1997 EEDPSMGIRGAALGRLNLNNVAVPAANILGEEEGSDTALAN-YSEAVALA * ***:* * **:::* *:.* ***: . **:*:**: Mflv_4455|M.gilvum_PYR-GCK RLGWAALAVGTSHAVLDYVIPYVKEREAFGEPIARRQSVAFMCANIAIEL Mvan_1907|M.vanbaalenii_PYR-1 RLGWAALAVGTSHAVLDYVIPYVKERTAFGEPIAHRQSVAFMCANIAIEL MSMEG_2081|M.smegmatis_MC2_155 RLGWAALAVGTSHAVLDYVVPYVKERHAFGEPIAHRQSVAFMCANIAIEL Mb3163|M.bovis_AF2122/97 RLGWAALAVGTSHAVLDYVVPYVKQRQAFGEPIAHRQAVAFMCANIAIEL Rv3139|M.tuberculosis_H37Rv RLGWAALAVGTSHAVLDYVVPYVKQRQAFGEPIAHRQAVAFMCANIAIEL MLBr_00661|M.leprae_Br4923 RLGWAALAVGTSHAVLDYVMPYVKEREAFGEPIARRQAVAFMCANIAIEL MAV_4018|M.avium_104 RLGWAALTVGTSHAVLDYVVPYVKEREAFGEPIARRQAVAFMCANIAIEL MMAR_1510|M.marinum_M RLGWAALAVGTSHAVLDYVIPYVKEREAFGEPIARRQAVAFMCANIAIEL MUL_2431|M.ulcerans_Agy99 RLGWAALAVGTSHAVLDYVIPYVKERKAFGEPIARRQAVAFMCANIAIEL TH_3828|M.thermoresistible__bu RLGWAALAVGTSHAVLDYVVPYVKERHAFGEPIAHRQAVAFMTADIAIEL MAB_3486|M.abscessus_ATCC_1997 RLGWASLAVGTGQAVLDYVIPYVKQREAFGEPIARRQAVAFMCANIAIEL *****:*:***.:******:****:* *******:**:**** *:***** Mflv_4455|M.gilvum_PYR-GCK DGLRLITWRGASRAEQGLSFAREAALAKKLGADKGMQIGLDGVQLLGGHG Mvan_1907|M.vanbaalenii_PYR-1 DGLRLITWRGAARADQGMSFAREAALAKKLGSDKAMQIGLDGVQLLGGHG MSMEG_2081|M.smegmatis_MC2_155 DGLRLITWRGAARAEQGLPFAREAALARKLGADKGMQIGLDGVQLLGGHG Mb3163|M.bovis_AF2122/97 DGLRLITWRGASRAEQGLPFAREAALAKRLGSDKGMQIGLDGVQLLGGHG Rv3139|M.tuberculosis_H37Rv DGLRLITWRGASRAEQGLPFAREAALAKRLGSDKGMQIGLDGVQLLGGHG MLBr_00661|M.leprae_Br4923 DGLRLITWRGASRAEQGLSFAREAALAKRLGSDKAMQIGLDGVQLLGGHG MAV_4018|M.avium_104 DGLRLITWRGAARAEQGLPFAREAALAKRLGADKGMQIGSDGVQLLGGHG MMAR_1510|M.marinum_M DGLRLITWRGASRAEQGLPFAREAALAKRLGSDKGMQIGLDGVQLLGGHG MUL_2431|M.ulcerans_Agy99 DGLRLITWRGASRAEQGLSFAREAALAKRLGSDKGMQIGLDGVQLLGGHG TH_3828|M.thermoresistible__bu DGLRLITWRGASRAEQGMPFIREAALAKRFATDKGMRIGLDGVQLLGGHG MAB_3486|M.abscessus_ATCC_1997 DGLRLVTLRGASRAEQGLPFVREAALARKLATDKGMQIGLDGVQLLGGHG *****:* ***:**:**:.* ******:::.:**.*:** ********** Mflv_4455|M.gilvum_PYR-GCK YTKEHPVERWYRDLRAIGVAEGVVVL Mvan_1907|M.vanbaalenii_PYR-1 YTKEHPVERWYRDLRALGVAEGVVVL MSMEG_2081|M.smegmatis_MC2_155 YTKEHPVERWYRDLRAIGIAEGVVVI Mb3163|M.bovis_AF2122/97 YTKEHPVERWYRDLRAIGVAEGVVVI Rv3139|M.tuberculosis_H37Rv YTKEHPVERWYRDLRAIGVAEGVVVI MLBr_00661|M.leprae_Br4923 FIKEHPVERWYRDLRAIGVAEGVVVI MAV_4018|M.avium_104 YTNEHPVERWYRDLRAIGVAEGVVVI MMAR_1510|M.marinum_M YTKEHPVERWYRDLRAIGVAEGVVVI MUL_2431|M.ulcerans_Agy99 YTKEHPVERWYRDLRAIGVAEGVVVI TH_3828|M.thermoresistible__bu YTKEHPVERWYRDLRAIGVAEGVVVL MAB_3486|M.abscessus_ATCC_1997 FTKEHPVERWYRNLRAIGVAEGVVVL : :*********:***:*:******: