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FRHVARTVLTLAVLSTAVACGSGDDGSGGITLRIGATSPTGTPAGSLGWGDKEGILAEQLKDAGVDKIEY SFFQSGSDVASALFAGAVDVAAVGDNPALRARSKDPKVVLLALDSINSDVWLVGAKGGPTDIEGLVGKAV TAPHGTVRDRSARQLIDAAGLNGRIEVRDVPTPESIAGLSSGEIAATAVSGASAIELQHKGFPLIDSLSR HGLGYTGTNIALTTFTDRHPGFADAWRRAVTAVNRDIQDNFDAYATWVAQTDGTEVEFVTESTRPDEFNT EPFPPRGVDQLQAAYEFLQADGSLQSPFDVREWAGATQ*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_3160 | - | - | 100% (319) | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
| M. gilvum PYR-GCK | Mflv_0723 | - | 1e-10 | 26.17% (321) | substrate-binding region of ABC-type glycine betaine transport |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2177 | - | 6e-13 | 26.64% (214) | ABC transporter periplasmic protein |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_3400 | - | 1e-05 | 23.04% (204) | ABC transporter substrate-binding protein |
| M. smegmatis MC2 155 | MSMEG_5529 | - | 1e-131 | 70.98% (317) | hypothetical protein MSMEG_5529 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_0122 | - | 4e-13 | 28.06% (310) | substrate-binding region of ABC-type glycine betaine transport |
CLUSTAL 2.0.9 multiple sequence alignment
MAB_2177|M.abscessus_ATCC_1997 MRLNYLAAALAVAMTMLSGCAIDHSGLQ---NGKPTIRIGYQN---FPSG
Mvan_0122|M.vanbaalenii_PYR-1 MKLKALLVVLVSAVLALAGCSVDNGGQHGDDSGKPTIRIGYQT---FPSG
Mflv_3160|M.gilvum_PYR-GCK MFRHVARTVLTLAVLST----AVACGSGDDGSGGITLRIGATSPTGTPAG
MSMEG_5529|M.smegmatis_MC2_155 MLSRLLRSLSAVAAASALAVGAVACSSSDD-TGGYTLRVGATSVTGTPAG
MAV_3400|M.avium_104 MRRHAALLASVLIAVAALGTGCSLESLSQS-AGVVNVVVGYQSKTINTVT
* . . . * .: :* . .
MAB_2177|M.abscessus_ATCC_1997 DLVVKQNR-WLETALPDY--------NIKWTRFDSGADINTAFIARELDF
Mvan_0122|M.vanbaalenii_PYR-1 DLIVKNNK-WLEEALPDY--------NIKWTKFDSGADVNTAFVAGELDF
Mflv_3160|M.gilvum_PYR-GCK SLGWGDKEGILAEQLKDAGV-----DKIEYSFFQSGSDVASALFAGAVDV
MSMEG_5529|M.smegmatis_MC2_155 SLGWGDKEGILTDELKSAGI-----DKIEYSFFQSGSDVVSALFAGAIDV
MAV_3400|M.avium_104 AGTLLRAQGYLERRLADITTRTGTKYAVRWQDYDTGAPITAQMLAEKIDI
. * * . :.: :::*: : : :.* :*.
MAB_2177|M.abscessus_ATCC_1997 GALGSSPFARGLSAPLNIPYRVAFVLDVAGDN-----EALVASNRSGVST
Mvan_0122|M.vanbaalenii_PYR-1 GALGSSPVARGLSEPLNIPYKVAFVLDVAGDN-----EALVVRNGAGVDT
Mflv_3160|M.gilvum_PYR-GCK AAVGDNPALRARSKDP----KVVLLALDSINS-----DVWLVGAKGGPTD
MSMEG_5529|M.smegmatis_MC2_155 AAVGDNPALRARSRDA----RVVLLSLDSING-----DAWIVGAKGGPAT
MAV_3400|M.avium_104 GSMGDYPMLINGSKTQANPLARTEMVSITGYNPKGALNMVVVSPESRAKD
.::*. * * . : : . : :. .
MAB_2177|M.abscessus_ATCC_1997 IAGLKGKRVGTPFASTAHYSLLSALAQNGLSASDVRLVDLQPQAALAAFD
Mvan_0122|M.vanbaalenii_PYR-1 IAQLKGRRIGTPFASTAHYSLLAALDQNGLSANDVQLIDLQPQAILAAWE
Mflv_3160|M.gilvum_PYR-GCK IEGLVGKAVTAPHGTVRDRSARQLIDAAGLNG-RIEVRDVPTPESIAGLS
MSMEG_5529|M.smegmatis_MC2_155 IGDLVGKSVTAPQGTIRDRAARQLIEAAGLSG-KIEVRDVPTPESIAGLS
MAV_3400|M.avium_104 LADLAGAKVSASVGSAGHGTLVRALSRAGVNG--VEVLNQQPQVGASALE
: * * : :. .: . : : *:.. :.: : . :. .
MAB_2177|M.abscessus_ATCC_1997 RGDVDAVYTWLPTVDQVRKNGRDLITSRQLAADGRPTLDLAVVANAFADA
Mvan_0122|M.vanbaalenii_PYR-1 RGDIDAAYTWLPTLDELRKTGRDLITSRQLADAGKPTLDLATVSDEFASA
Mflv_3160|M.gilvum_PYR-GCK SGEIAATAVSGASAIELQHKGFPLIDS--LSRHGLGYTGTNIALTTFTDR
MSMEG_5529|M.smegmatis_MC2_155 SGQIDATVVTGASAAELKDRGFPIVDS--LSQHGFGSTGTNISLTSFTEA
MAV_3400|M.avium_104 SGQVQALSQFVAWPGLLVFQGKAKLLYDGAELN-LPTLHGVVVRRSYAAA
*:: * . : * : ::
MAB_2177|M.abscessus_ATCC_1997 HPEIVDAWRRQQARALRLIHDDPSAAAKAIAAENGLTPQEVADQLKQG--
Mvan_0122|M.vanbaalenii_PYR-1 HPEAVDVWRQQQGRALDLIREDPQAAAEAIAAEIGLTPQDVAGQLKQM--
Mflv_3160|M.gilvum_PYR-GCK HPGFADAWRRAVTAVNRDIQDNFDAYATWVAQTDGTEVEFVT--------
MSMEG_5529|M.smegmatis_MC2_155 HPEFAEAWQNAVTAVNKDITENFDAYTQWVAETDDTEVEYVR--------
MAV_3400|M.avium_104 HPEVLAAFLQAQLDATDFLNTHPLQAARIVADASGLPPEVVYLYNGPGGT
** .: . . : . : :* . : *
MAB_2177|M.abscessus_ATCC_1997 -------------------------------IYLTPAEVGSAKWLGEQGK
Mvan_0122|M.vanbaalenii_PYR-1 -------------------------------VFLTPQDISSTEWLGTEGN
Mflv_3160|M.gilvum_PYR-GCK -------------------------------------ESTRPDEFNTEPF
MSMEG_5529|M.smegmatis_MC2_155 -------------------------------------QSTQADEFNTEPF
MAV_3400|M.avium_104 SFDTTLKPSLTEALKSDVPYLKSIGDFADLDVDKFVVDEPLRAVFTARGL
: : .
MAB_2177|M.abscessus_ATCC_1997 PGHIAVDLQSASQFLADQKQIP-------AAAPLATFENAVYTKGLPDAI
Mvan_0122|M.vanbaalenii_PYR-1 PGNLAVNLESASQFLADQSQIP-------AAAPLKTFQDAVYTKGLPGAL
Mflv_3160|M.gilvum_PYR-GCK PPRGVDQLQAAYEFLQADGSLQ-------SPFDVREWAGATQ--------
MSMEG_5529|M.smegmatis_MC2_155 PQKGVEQLEAAYNFLKADGSLD-------NEYSVAEWAGAKS--------
MAV_3400|M.avium_104 DYQAARARTTNPSTLRGDPALAGELWLDGADTTQTTADPASLLRAVRDAL
. . : . * : : *
MAB_2177|M.abscessus_ATCC_1997 GR------------------------------------------------
Mvan_0122|M.vanbaalenii_PYR-1 NE------------------------------------------------
Mflv_3160|M.gilvum_PYR-GCK --------------------------------------------------
MSMEG_5529|M.smegmatis_MC2_155 --------------------------------------------------
MAV_3400|M.avium_104 GRGARVRAAYVPDTEFGTRWFADKAFWVKDGQNYLPFGTAAGAGRYLAAH
MAB_2177|M.abscessus_ATCC_1997 ----------------
Mvan_0122|M.vanbaalenii_PYR-1 ----------------
Mflv_3160|M.gilvum_PYR-GCK ----------------
MSMEG_5529|M.smegmatis_MC2_155 ----------------
MAV_3400|M.avium_104 PGSIAVNYQQALGGSV