For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. gilvum PYR-GCK Mflv_3138 (-)

annotation: spermidine/putrescine ABC transporter ATPase subunit
coordinates: 3322228 - 3323499
length: 423

RNRLRRTAESAIVYPQPGGSIEEDGALTRAHTATGHGIGQGAASTKGGPVIEIDHVTKRFGDYLAVSDAD
FSIASGEFFSMLGPSGCGKTTTLRMIAGFETPSEGAIRLEGADVSKTPPNKRNVNTVFQHYALFPHMTVW
DNVAYGPRSKKLDKGEIRKRVDELLEIVRLSDFAERKPAQLSGGQQQRVALARALVNYPSALLLDEPLGA
LDLKLRHVMQFELKRIQREIGITFIYVTHDQEEALTMSDRIAVMNAGNVEQIGTPTEIYDRPATVFVASF
IGQANLWAGRQTGRTNRDFVEIDVLGSTLKARPGETTIEPGGHATLMVRPERVRVSMDAPTGDVAGVRAT
VSDLTFQGPVVRLSLAAPDDSTVIAHVGPEQDLPLLRPGDEVYVSWAPDASLVLPGADIPTTEDLEEMLD
DS*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_3138--100% (423)spermidine/putrescine ABC transporter ATPase subunit
M. gilvum PYR-GCKMflv_1083-1e-7041.78% (359) ABC transporter related
M. gilvum PYR-GCKMflv_2681-9e-7053.45% (232) sulfate ABC transporter, ATPase subunit

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2419ccysA11e-6841.33% (346) sulfate-transport ATP-binding protein ABC transporter CysA1
M. tuberculosis H37RvRv2397ccysA11e-6841.33% (346) sulfate-transport ATP-binding protein ABC transporter CysA1
M. leprae Br4923MLBr_01089-4e-6651.50% (233) putative ABC-transport protein, ATP-binding component
M. abscessus ATCC 19977MAB_1655-8e-7242.25% (355) sulfate ABC transporter, ATP-binding protein SysA
M. marinum MMMAR_3715cysA18e-7043.02% (351) sulfate-transport ATP-binding protein ABC transporter CysA1
M. avium 104MAV_1785-1e-6941.55% (361) sulfate/thiosulfate import ATP-binding protein CysA
M. smegmatis MC2 155MSMEG_3281-0.081.28% (422) spermidine/putrescine ABC transporter ATP-binding subunit
M. thermoresistible (build 8)TH_2424-3e-6742.36% (347) PUTATIVE sulfate ABC transporter, ATPase subunit
M. ulcerans Agy99MUL_3658cysA12e-6942.74% (351) sulfate-transport ATP-binding protein ABC transporter CysA1
M. vanbaalenii PYR-1Mvan_3387-0.095.71% (373) spermidine/putrescine ABC transporter ATPase subunit

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_3138|M.gilvum_PYR-GCK          MRNRLRRTAESAIVYPQPGGSIEEDGALT--RAHTATGHGIGQ-GAASTK
Mvan_3387|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_3281|M.smegmatis_MC2_155      ----MRTSAESAKVYPQPLRLHLRRTTLTGPDTTAAVDHSAGQSGEPRKS
Mb2419c|M.bovis_AF2122/97           ------------------------------------------MT------
Rv2397c|M.tuberculosis_H37Rv        ------------------------------------------MT------
MMAR_3715|M.marinum_M               ------------------------------------MKKETSLTGPGT--
MUL_3658|M.ulcerans_Agy99           ------------------------------------------MTGPGT--
MAV_1785|M.avium_104                ------------------------------------------MTDAGTDR
TH_2424|M.thermoresistible__bu      ------------------------------------------MT------
MAB_1655|M.abscessus_ATCC_1997      ------------------------------------------MT------
MLBr_01089|M.leprae_Br4923          --------------------------------------------------
                                                                                      

Mflv_3138|M.gilvum_PYR-GCK          GGPVIEIDHVTKRFG-DYLAVSDADFSIASGEFFSMLGPSGCGKTTTLRM
Mvan_3387|M.vanbaalenii_PYR-1       ---MIEIDHVTKSFG-DYVAVADADFSIASGEFFSMLGPSGCGKTTTLRM
MSMEG_3281|M.smegmatis_MC2_155      GAPVIEIDHVTKRFA-DYVAVADADFSIAQGEFFSMLGPSGCGKTTTLRM
Mb2419c|M.bovis_AF2122/97           --YAIVVADATKRYG-DFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRT
Rv2397c|M.tuberculosis_H37Rv        --YAIVVADATKRYG-DFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRT
MMAR_3715|M.marinum_M               GGHAIVVRDAFKQYG-DFVALDHVDFVVPAGSLTALLGPSGSGKSTLLRT
MUL_3658|M.ulcerans_Agy99           GGHAIVVRDAFKQYG-DFVALDHVDFVVPAGSLTALLGPSGSGKSTLLRT
MAV_1785|M.avium_104                GDIAITVRDAYKRYG-DFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRT
TH_2424|M.thermoresistible__bu      --DAITVRGANKRYG-DFAALDNVDFAVPAGSLTALLGPSGSGKSTLLRA
MAB_1655|M.abscessus_ATCC_1997      AENTITVRGANKHYG-DFAALDNIDFDVPSGSLTALLGPSGSGKSTLLRS
MLBr_01089|M.leprae_Br4923          -MAEIVLEHVNKNYPNGATAVHDLSITVADGEFLILIGPSGCGKTTTLNM
                                        * :  . * :  .  *: . .: :. *.:  ::****.**:* *. 

Mflv_3138|M.gilvum_PYR-GCK          IAGFETPSEGAIRLEGADVSKTPPNKRNVNTVFQHYALFPHMTVWDNVAY
Mvan_3387|M.vanbaalenii_PYR-1       IAGFETPTEGAIRLEGADVSRTPPNKRNVNTVFQHYALFPHMTVWDNVAY
MSMEG_3281|M.smegmatis_MC2_155      IAGFESPTEGAIRLEGVDVSRVPPHKRNVNTVFQHYALFPHMTVWDNVAY
Mb2419c|M.bovis_AF2122/97           IAGLDQPDTGTITINGRDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAF
Rv2397c|M.tuberculosis_H37Rv        IAGLDQPDTGTITINGRDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAF
MMAR_3715|M.marinum_M               IAGLDQPDSGNITINGRDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAY
MUL_3658|M.ulcerans_Agy99           IAGLDQPDSGNITINGRDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAY
MAV_1785|M.avium_104                IAGLDQPDTGTVTIYGRDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAY
TH_2424|M.thermoresistible__bu      IAGLDRPDTGTITINGRDVTDVPPQRRGIGFVFQHYAAFKHLTVRDNVAF
MAB_1655|M.abscessus_ATCC_1997      IAGLDNPDSGTITINGRDVTGVPPQRRDIGFVFQHYAAFKHLTVWENVAF
MLBr_01089|M.leprae_Br4923          IAGLEDISSGELRIDGDRVNEKAPKDRDIAMVFQSYALYPHMTVRQNIAF
                                    ***::    * : : *  *.  .*: *.:  *** ** : *:** :*:*:

Mflv_3138|M.gilvum_PYR-GCK          GPRSKKLDKGEIRKRVDELLEIVRLSDFAERKPAQLSGGQQQRVALARAL
Mvan_3387|M.vanbaalenii_PYR-1       GPRSKKLGKGEIRKRVDELLDIVRLTDFAERKPAQLSGGQQQRVALARAL
MSMEG_3281|M.smegmatis_MC2_155      GPRSAKKDKAEIKRSVDELLEIVKLSDFAKRKPAQLSGGQQQRVALARAL
Mb2419c|M.bovis_AF2122/97           GLKIRKRPKAEIKAKVDNLLQVVGLSGFQSRYPNQLSGGQRQRMALARAL
Rv2397c|M.tuberculosis_H37Rv        GLKIRKRPKAEIKAKVDNLLQVVGLSGFQSRYPNQLSGGQRQRMALARAL
MMAR_3715|M.marinum_M               GLKIRKRPKAEIRDKVDNLLEVVGLSGFHGRYPNQLSGGQRQRMALARAL
MUL_3658|M.ulcerans_Agy99           GLKIRKRPKAEIRDKVDNLLEVVGLSGFHGRYPDQLSGGQRQRMALARAL
MAV_1785|M.avium_104                GLKVRKRPKAEIKAKVDNLLEVVGLSGFQGRYPNQLSGGQRQRMALARAL
TH_2424|M.thermoresistible__bu      GLKIRRRPKREIAEKVDNLLEVVGLAGFQNRYPNQLSGGQRQRMALARAL
MAB_1655|M.abscessus_ATCC_1997      GLKIRKKPKAEIKKKVDDLLEVVGLSGFHTRYPAQLSGGQRQRMALARAL
MLBr_01089|M.leprae_Br4923          PLMLAKVKKAEIAQKVSETAQILDLTDLLDRKPSQLSGGQRQRVAMGRAI
                                         :  * **   *.:  ::: *:.:  * * ******:**:*:.**:

Mflv_3138|M.gilvum_PYR-GCK          VNYPSALLLDEPLGALDLKLRHVMQFELKRIQREIGITFIYVTHDQEEAL
Mvan_3387|M.vanbaalenii_PYR-1       VNYPSALLLDEPLGALDLKLRHVMQFELKRIQREVGITFIYVTHDQEEAL
MSMEG_3281|M.smegmatis_MC2_155      VNYPSALLLDEPLGALDLKLRHAMQFELKRIQREVGITFIYVTHDQEEAL
Mb2419c|M.bovis_AF2122/97           AVDPEVLLLDEPFGALDAKVREELRAWLRRLHDEVHVTTVLVTHDQAEAL
Rv2397c|M.tuberculosis_H37Rv        AVDPEVLLLDEPFGALDAKVREELRAWLRRLHDEVHVTTVLVTHDQAEAL
MMAR_3715|M.marinum_M               AVDPEVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLVTHDQAEAL
MUL_3658|M.ulcerans_Agy99           AVDPEVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLVTHDQAEAL
MAV_1785|M.avium_104                AVDPQVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLVTHDQAEAL
TH_2424|M.thermoresistible__bu      AVDPEVLLLDEPFGALDAKVREDLRTWLRRLHEEVHVTTVLVTHDQSEAL
MAB_1655|M.abscessus_ATCC_1997      AVDPQVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLVTHDQAEAL
MLBr_01089|M.leprae_Br4923          VRHPKAFLMDEPLSNLDAKLRVRTRGEIARLQRRLGATTVYVTHDQTEAM
                                    .  *..:*:***:. ** *:*   :  : *:: .:  * : ***** **:

Mflv_3138|M.gilvum_PYR-GCK          TMSDRIAVMNAGNVEQIGTPTEIYDRPATVFVASFIG--QANLWAGRQTG
Mvan_3387|M.vanbaalenii_PYR-1       TMSDRIAVMNAGNVEQIGTPTEIYDRPATVFVASFIG--QANLWAGRQTG
MSMEG_3281|M.smegmatis_MC2_155      TMSDRIAVMNAGNVEQIGTPTEIYDKPATVFVANFIG--QANLWPGRQTE
Mb2419c|M.bovis_AF2122/97           DVADRIAVLHKGRIEQVGSPTDVYDAPANAFVMSFLG--AVSTLNG----
Rv2397c|M.tuberculosis_H37Rv        DVADRIAVLHKGRIEQVGSPTDVYDAPANAFVMSFLG--AVSTLNG----
MMAR_3715|M.marinum_M               DVADRIAVLNSGRIEQVGSPTEVYDAPANAFVMSFLG--AVSALNG----
MUL_3658|M.ulcerans_Agy99           DVADRIAVLNSGRIEQVGSPTEVYDAPTNAFVMSFLG--AVSALNG----
MAV_1785|M.avium_104                DVADRIAVLNQGRIEQIGSPTEVYDAPTNAFVMSFLG--AVSTLNG----
TH_2424|M.thermoresistible__bu      DVADRIAVLNNGRIEQVGSPAEVYDSPANEFVMSFLG--AVSSLNG----
MAB_1655|M.abscessus_ATCC_1997      DVADRIAVLNKGRIEQVGSPEDLYDRPANSFVMSFLG--PVAKLNG----
MLBr_01089|M.leprae_Br4923          TLGDRVVVMRSGVVQQIGTPDELYERPVNLFVAGFIGSPVMNFFPAKLTP
                                     :.**:.*:. * ::*:*:* ::*: *.. ** .*:*        .    

Mflv_3138|M.gilvum_PYR-GCK          RTNRDFVEIDVLGSTLKARPGETTIEPGGHATLMVRPERVRVSMDAPTGD
Mvan_3387|M.vanbaalenii_PYR-1       RANRDYVEVDVLGSTLKARPGETTIEPGGHATLMVRPERIRVSMDAPTGD
MSMEG_3281|M.smegmatis_MC2_155      RTAGDYVEVEVLGTKLRAKPGDTAIEAGGHATLMIRPERVRVSIDAPTGD
Mb2419c|M.bovis_AF2122/97           ---------------SLVRPHDIRVGR--------TPNMAVAAADGTAGS
Rv2397c|M.tuberculosis_H37Rv        ---------------SLVRPHDIRVGR--------TPNMAVAAADGTAGS
MMAR_3715|M.marinum_M               ---------------ALVRPHDIRVGR--------TPEMAVAAADGTGES
MUL_3658|M.ulcerans_Agy99           ---------------ALVRPHDIRVGR--------TPEMAVAAADGTGES
MAV_1785|M.avium_104                ---------------TLVRPHDIRVGR--------TPEMAVAAEDGTAES
TH_2424|M.thermoresistible__bu      ---------------TLVRPHDIWVGR--------HPELPTS--DSTLQA
MAB_1655|M.abscessus_ATCC_1997      ---------------ILVRPHDIRVGR--------NADLARAAAEGTGET
MLBr_01089|M.leprae_Br4923          NG-----LTLPLGELNLSRDVQAMIGQHP------VPDRVIVGVRPEHLT
                                                      :  :  :           .:            

Mflv_3138|M.gilvum_PYR-GCK          VAGVRATVSDLTFQGPVVRLSLAAPDD-STVIAHVGP-EQDLPLLRPGDE
Mvan_3387|M.vanbaalenii_PYR-1       VAAVRATVSDLTFQGPVVRLSLAAPDD-STVIAHVGP-EQDLPLLRPGDD
MSMEG_3281|M.smegmatis_MC2_155      VATVPATVTDLTFQGPVVRLSLAAPDD-STIVAHVGA-EQNLPLLRPGDR
Mb2419c|M.bovis_AF2122/97           TGVLRAVVDRVVVLGFEVRVELTSAATGGAFTAQITRGDAEALALREGDT
Rv2397c|M.tuberculosis_H37Rv        TGVLRAVVDRVVVLGFEVRVELTSAATGGAFTAQITRGDAEALALREGDT
MMAR_3715|M.marinum_M               TGVTRAVVDRIVVLGFEVRVELTSAATGGAFTAQITRGDAEALALQEGDT
MUL_3658|M.ulcerans_Agy99           TGVTRAVVDRIVVLGFEVRVELTSAATGGAFTAQITRGDAEALALQEGDT
MAV_1785|M.avium_104                TGVARAIVDRVVKLGFEVRVELTSAATGGPFTAQITRGDAEALALREGDT
TH_2424|M.thermoresistible__bu      TGVVRARIDRVVMLGFEVRLELTSATNNAPFTAQITRGDAEALGLRSGDT
MAB_1655|M.abscessus_ATCC_1997      TGVTKATVDRVVYLGFEVRVELTSAATGEQFTAQITRGDAEALGLREGDP
MLBr_01089|M.leprae_Br4923          DAKLIDAHQHGTVLTFKVKVDLVESLGADKYIYFTTTGCDVYSAQLDELA
                                     .         .     *::.*. .                         

Mflv_3138|M.gilvum_PYR-GCK          VYVSWAPDASLVLP--GADIPTTEDLEEMLDDS-----------------
Mvan_3387|M.vanbaalenii_PYR-1       VFVSWAPDASLVLP--GADIPTTEDLEEMLDDS-----------------
MSMEG_3281|M.smegmatis_MC2_155      VHVSWSPDASRVLP--AADIPTTEDLEDMLDDS-----------------
Mb2419c|M.bovis_AF2122/97           VYVRATRVPPIAG---GVSGVDDAGVERVKVTST----------------
Rv2397c|M.tuberculosis_H37Rv        VYVRATRVPPIAG---GVSGVDDAGVERVKVTST----------------
MMAR_3715|M.marinum_M               VYVRATRVPPIAG---AAPAVPDDGAGSTPSAAQIGVGGQ----------
MUL_3658|M.ulcerans_Agy99           VYVRATRVPPIAG---AAPAVPDDGAGSTPRAAQIGVGGQ----------
MAV_1785|M.avium_104                VYVRATRVPPITAGATTVPAVSRDGADEATLTSA----------------
TH_2424|M.thermoresistible__bu      VYVRATRVP----------ALPTGDVDERVAAR-----------------
MAB_1655|M.abscessus_ATCC_1997      VYVRVTRVP---------------DVGELAEVAS----------------
MLBr_01089|M.leprae_Br4923          SELEVRENQFVARVSAESKMAIGESIELAFGTAKIAVFDADSGVNLTVSA
                                      :                     .                         

Mflv_3138|M.gilvum_PYR-GCK          ----
Mvan_3387|M.vanbaalenii_PYR-1       ----
MSMEG_3281|M.smegmatis_MC2_155      ----
Mb2419c|M.bovis_AF2122/97           ----
Rv2397c|M.tuberculosis_H37Rv        ----
MMAR_3715|M.marinum_M               ----
MUL_3658|M.ulcerans_Agy99           ----
MAV_1785|M.avium_104                ----
TH_2424|M.thermoresistible__bu      ----
MAB_1655|M.abscessus_ATCC_1997      ----
MLBr_01089|M.leprae_Br4923          PTDA