For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RNRLRRTAESAIVYPQPGGSIEEDGALTRAHTATGHGIGQGAASTKGGPVIEIDHVTKRFGDYLAVSDAD FSIASGEFFSMLGPSGCGKTTTLRMIAGFETPSEGAIRLEGADVSKTPPNKRNVNTVFQHYALFPHMTVW DNVAYGPRSKKLDKGEIRKRVDELLEIVRLSDFAERKPAQLSGGQQQRVALARALVNYPSALLLDEPLGA LDLKLRHVMQFELKRIQREIGITFIYVTHDQEEALTMSDRIAVMNAGNVEQIGTPTEIYDRPATVFVASF IGQANLWAGRQTGRTNRDFVEIDVLGSTLKARPGETTIEPGGHATLMVRPERVRVSMDAPTGDVAGVRAT VSDLTFQGPVVRLSLAAPDDSTVIAHVGPEQDLPLLRPGDEVYVSWAPDASLVLPGADIPTTEDLEEMLD DS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3138 | - | - | 100% (423) | spermidine/putrescine ABC transporter ATPase subunit |
M. gilvum PYR-GCK | Mflv_1083 | - | 1e-70 | 41.78% (359) | ABC transporter related |
M. gilvum PYR-GCK | Mflv_2681 | - | 9e-70 | 53.45% (232) | sulfate ABC transporter, ATPase subunit |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2419c | cysA1 | 1e-68 | 41.33% (346) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
M. tuberculosis H37Rv | Rv2397c | cysA1 | 1e-68 | 41.33% (346) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
M. leprae Br4923 | MLBr_01089 | - | 4e-66 | 51.50% (233) | putative ABC-transport protein, ATP-binding component |
M. abscessus ATCC 19977 | MAB_1655 | - | 8e-72 | 42.25% (355) | sulfate ABC transporter, ATP-binding protein SysA |
M. marinum M | MMAR_3715 | cysA1 | 8e-70 | 43.02% (351) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
M. avium 104 | MAV_1785 | - | 1e-69 | 41.55% (361) | sulfate/thiosulfate import ATP-binding protein CysA |
M. smegmatis MC2 155 | MSMEG_3281 | - | 0.0 | 81.28% (422) | spermidine/putrescine ABC transporter ATP-binding subunit |
M. thermoresistible (build 8) | TH_2424 | - | 3e-67 | 42.36% (347) | PUTATIVE sulfate ABC transporter, ATPase subunit |
M. ulcerans Agy99 | MUL_3658 | cysA1 | 2e-69 | 42.74% (351) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
M. vanbaalenii PYR-1 | Mvan_3387 | - | 0.0 | 95.71% (373) | spermidine/putrescine ABC transporter ATPase subunit |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3138|M.gilvum_PYR-GCK MRNRLRRTAESAIVYPQPGGSIEEDGALT--RAHTATGHGIGQ-GAASTK Mvan_3387|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_3281|M.smegmatis_MC2_155 ----MRTSAESAKVYPQPLRLHLRRTTLTGPDTTAAVDHSAGQSGEPRKS Mb2419c|M.bovis_AF2122/97 ------------------------------------------MT------ Rv2397c|M.tuberculosis_H37Rv ------------------------------------------MT------ MMAR_3715|M.marinum_M ------------------------------------MKKETSLTGPGT-- MUL_3658|M.ulcerans_Agy99 ------------------------------------------MTGPGT-- MAV_1785|M.avium_104 ------------------------------------------MTDAGTDR TH_2424|M.thermoresistible__bu ------------------------------------------MT------ MAB_1655|M.abscessus_ATCC_1997 ------------------------------------------MT------ MLBr_01089|M.leprae_Br4923 -------------------------------------------------- Mflv_3138|M.gilvum_PYR-GCK GGPVIEIDHVTKRFG-DYLAVSDADFSIASGEFFSMLGPSGCGKTTTLRM Mvan_3387|M.vanbaalenii_PYR-1 ---MIEIDHVTKSFG-DYVAVADADFSIASGEFFSMLGPSGCGKTTTLRM MSMEG_3281|M.smegmatis_MC2_155 GAPVIEIDHVTKRFA-DYVAVADADFSIAQGEFFSMLGPSGCGKTTTLRM Mb2419c|M.bovis_AF2122/97 --YAIVVADATKRYG-DFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRT Rv2397c|M.tuberculosis_H37Rv --YAIVVADATKRYG-DFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRT MMAR_3715|M.marinum_M GGHAIVVRDAFKQYG-DFVALDHVDFVVPAGSLTALLGPSGSGKSTLLRT MUL_3658|M.ulcerans_Agy99 GGHAIVVRDAFKQYG-DFVALDHVDFVVPAGSLTALLGPSGSGKSTLLRT MAV_1785|M.avium_104 GDIAITVRDAYKRYG-DFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRT TH_2424|M.thermoresistible__bu --DAITVRGANKRYG-DFAALDNVDFAVPAGSLTALLGPSGSGKSTLLRA MAB_1655|M.abscessus_ATCC_1997 AENTITVRGANKHYG-DFAALDNIDFDVPSGSLTALLGPSGSGKSTLLRS MLBr_01089|M.leprae_Br4923 -MAEIVLEHVNKNYPNGATAVHDLSITVADGEFLILIGPSGCGKTTTLNM * : . * : . *: . .: :. *.: ::****.**:* *. Mflv_3138|M.gilvum_PYR-GCK IAGFETPSEGAIRLEGADVSKTPPNKRNVNTVFQHYALFPHMTVWDNVAY Mvan_3387|M.vanbaalenii_PYR-1 IAGFETPTEGAIRLEGADVSRTPPNKRNVNTVFQHYALFPHMTVWDNVAY MSMEG_3281|M.smegmatis_MC2_155 IAGFESPTEGAIRLEGVDVSRVPPHKRNVNTVFQHYALFPHMTVWDNVAY Mb2419c|M.bovis_AF2122/97 IAGLDQPDTGTITINGRDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAF Rv2397c|M.tuberculosis_H37Rv IAGLDQPDTGTITINGRDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAF MMAR_3715|M.marinum_M IAGLDQPDSGNITINGRDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAY MUL_3658|M.ulcerans_Agy99 IAGLDQPDSGNITINGRDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAY MAV_1785|M.avium_104 IAGLDQPDTGTVTIYGRDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAY TH_2424|M.thermoresistible__bu IAGLDRPDTGTITINGRDVTDVPPQRRGIGFVFQHYAAFKHLTVRDNVAF MAB_1655|M.abscessus_ATCC_1997 IAGLDNPDSGTITINGRDVTGVPPQRRDIGFVFQHYAAFKHLTVWENVAF MLBr_01089|M.leprae_Br4923 IAGLEDISSGELRIDGDRVNEKAPKDRDIAMVFQSYALYPHMTVRQNIAF ***:: * : : * *. .*: *.: *** ** : *:** :*:*: Mflv_3138|M.gilvum_PYR-GCK GPRSKKLDKGEIRKRVDELLEIVRLSDFAERKPAQLSGGQQQRVALARAL Mvan_3387|M.vanbaalenii_PYR-1 GPRSKKLGKGEIRKRVDELLDIVRLTDFAERKPAQLSGGQQQRVALARAL MSMEG_3281|M.smegmatis_MC2_155 GPRSAKKDKAEIKRSVDELLEIVKLSDFAKRKPAQLSGGQQQRVALARAL Mb2419c|M.bovis_AF2122/97 GLKIRKRPKAEIKAKVDNLLQVVGLSGFQSRYPNQLSGGQRQRMALARAL Rv2397c|M.tuberculosis_H37Rv GLKIRKRPKAEIKAKVDNLLQVVGLSGFQSRYPNQLSGGQRQRMALARAL MMAR_3715|M.marinum_M GLKIRKRPKAEIRDKVDNLLEVVGLSGFHGRYPNQLSGGQRQRMALARAL MUL_3658|M.ulcerans_Agy99 GLKIRKRPKAEIRDKVDNLLEVVGLSGFHGRYPDQLSGGQRQRMALARAL MAV_1785|M.avium_104 GLKVRKRPKAEIKAKVDNLLEVVGLSGFQGRYPNQLSGGQRQRMALARAL TH_2424|M.thermoresistible__bu GLKIRRRPKREIAEKVDNLLEVVGLAGFQNRYPNQLSGGQRQRMALARAL MAB_1655|M.abscessus_ATCC_1997 GLKIRKKPKAEIKKKVDDLLEVVGLSGFHTRYPAQLSGGQRQRMALARAL MLBr_01089|M.leprae_Br4923 PLMLAKVKKAEIAQKVSETAQILDLTDLLDRKPSQLSGGQRQRVAMGRAI : * ** *.: ::: *:.: * * ******:**:*:.**: Mflv_3138|M.gilvum_PYR-GCK VNYPSALLLDEPLGALDLKLRHVMQFELKRIQREIGITFIYVTHDQEEAL Mvan_3387|M.vanbaalenii_PYR-1 VNYPSALLLDEPLGALDLKLRHVMQFELKRIQREVGITFIYVTHDQEEAL MSMEG_3281|M.smegmatis_MC2_155 VNYPSALLLDEPLGALDLKLRHAMQFELKRIQREVGITFIYVTHDQEEAL Mb2419c|M.bovis_AF2122/97 AVDPEVLLLDEPFGALDAKVREELRAWLRRLHDEVHVTTVLVTHDQAEAL Rv2397c|M.tuberculosis_H37Rv AVDPEVLLLDEPFGALDAKVREELRAWLRRLHDEVHVTTVLVTHDQAEAL MMAR_3715|M.marinum_M AVDPEVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLVTHDQAEAL MUL_3658|M.ulcerans_Agy99 AVDPEVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLVTHDQAEAL MAV_1785|M.avium_104 AVDPQVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLVTHDQAEAL TH_2424|M.thermoresistible__bu AVDPEVLLLDEPFGALDAKVREDLRTWLRRLHEEVHVTTVLVTHDQSEAL MAB_1655|M.abscessus_ATCC_1997 AVDPQVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLVTHDQAEAL MLBr_01089|M.leprae_Br4923 VRHPKAFLMDEPLSNLDAKLRVRTRGEIARLQRRLGATTVYVTHDQTEAM . *..:*:***:. ** *:* : : *:: .: * : ***** **: Mflv_3138|M.gilvum_PYR-GCK TMSDRIAVMNAGNVEQIGTPTEIYDRPATVFVASFIG--QANLWAGRQTG Mvan_3387|M.vanbaalenii_PYR-1 TMSDRIAVMNAGNVEQIGTPTEIYDRPATVFVASFIG--QANLWAGRQTG MSMEG_3281|M.smegmatis_MC2_155 TMSDRIAVMNAGNVEQIGTPTEIYDKPATVFVANFIG--QANLWPGRQTE Mb2419c|M.bovis_AF2122/97 DVADRIAVLHKGRIEQVGSPTDVYDAPANAFVMSFLG--AVSTLNG---- Rv2397c|M.tuberculosis_H37Rv DVADRIAVLHKGRIEQVGSPTDVYDAPANAFVMSFLG--AVSTLNG---- MMAR_3715|M.marinum_M DVADRIAVLNSGRIEQVGSPTEVYDAPANAFVMSFLG--AVSALNG---- MUL_3658|M.ulcerans_Agy99 DVADRIAVLNSGRIEQVGSPTEVYDAPTNAFVMSFLG--AVSALNG---- MAV_1785|M.avium_104 DVADRIAVLNQGRIEQIGSPTEVYDAPTNAFVMSFLG--AVSTLNG---- TH_2424|M.thermoresistible__bu DVADRIAVLNNGRIEQVGSPAEVYDSPANEFVMSFLG--AVSSLNG---- MAB_1655|M.abscessus_ATCC_1997 DVADRIAVLNKGRIEQVGSPEDLYDRPANSFVMSFLG--PVAKLNG---- MLBr_01089|M.leprae_Br4923 TLGDRVVVMRSGVVQQIGTPDELYERPVNLFVAGFIGSPVMNFFPAKLTP :.**:.*:. * ::*:*:* ::*: *.. ** .*:* . Mflv_3138|M.gilvum_PYR-GCK RTNRDFVEIDVLGSTLKARPGETTIEPGGHATLMVRPERVRVSMDAPTGD Mvan_3387|M.vanbaalenii_PYR-1 RANRDYVEVDVLGSTLKARPGETTIEPGGHATLMVRPERIRVSMDAPTGD MSMEG_3281|M.smegmatis_MC2_155 RTAGDYVEVEVLGTKLRAKPGDTAIEAGGHATLMIRPERVRVSIDAPTGD Mb2419c|M.bovis_AF2122/97 ---------------SLVRPHDIRVGR--------TPNMAVAAADGTAGS Rv2397c|M.tuberculosis_H37Rv ---------------SLVRPHDIRVGR--------TPNMAVAAADGTAGS MMAR_3715|M.marinum_M ---------------ALVRPHDIRVGR--------TPEMAVAAADGTGES MUL_3658|M.ulcerans_Agy99 ---------------ALVRPHDIRVGR--------TPEMAVAAADGTGES MAV_1785|M.avium_104 ---------------TLVRPHDIRVGR--------TPEMAVAAEDGTAES TH_2424|M.thermoresistible__bu ---------------TLVRPHDIWVGR--------HPELPTS--DSTLQA MAB_1655|M.abscessus_ATCC_1997 ---------------ILVRPHDIRVGR--------NADLARAAAEGTGET MLBr_01089|M.leprae_Br4923 NG-----LTLPLGELNLSRDVQAMIGQHP------VPDRVIVGVRPEHLT : : : .: Mflv_3138|M.gilvum_PYR-GCK VAGVRATVSDLTFQGPVVRLSLAAPDD-STVIAHVGP-EQDLPLLRPGDE Mvan_3387|M.vanbaalenii_PYR-1 VAAVRATVSDLTFQGPVVRLSLAAPDD-STVIAHVGP-EQDLPLLRPGDD MSMEG_3281|M.smegmatis_MC2_155 VATVPATVTDLTFQGPVVRLSLAAPDD-STIVAHVGA-EQNLPLLRPGDR Mb2419c|M.bovis_AF2122/97 TGVLRAVVDRVVVLGFEVRVELTSAATGGAFTAQITRGDAEALALREGDT Rv2397c|M.tuberculosis_H37Rv TGVLRAVVDRVVVLGFEVRVELTSAATGGAFTAQITRGDAEALALREGDT MMAR_3715|M.marinum_M TGVTRAVVDRIVVLGFEVRVELTSAATGGAFTAQITRGDAEALALQEGDT MUL_3658|M.ulcerans_Agy99 TGVTRAVVDRIVVLGFEVRVELTSAATGGAFTAQITRGDAEALALQEGDT MAV_1785|M.avium_104 TGVARAIVDRVVKLGFEVRVELTSAATGGPFTAQITRGDAEALALREGDT TH_2424|M.thermoresistible__bu TGVVRARIDRVVMLGFEVRLELTSATNNAPFTAQITRGDAEALGLRSGDT MAB_1655|M.abscessus_ATCC_1997 TGVTKATVDRVVYLGFEVRVELTSAATGEQFTAQITRGDAEALGLREGDP MLBr_01089|M.leprae_Br4923 DAKLIDAHQHGTVLTFKVKVDLVESLGADKYIYFTTTGCDVYSAQLDELA . . *::.*. . Mflv_3138|M.gilvum_PYR-GCK VYVSWAPDASLVLP--GADIPTTEDLEEMLDDS----------------- Mvan_3387|M.vanbaalenii_PYR-1 VFVSWAPDASLVLP--GADIPTTEDLEEMLDDS----------------- MSMEG_3281|M.smegmatis_MC2_155 VHVSWSPDASRVLP--AADIPTTEDLEDMLDDS----------------- Mb2419c|M.bovis_AF2122/97 VYVRATRVPPIAG---GVSGVDDAGVERVKVTST---------------- Rv2397c|M.tuberculosis_H37Rv VYVRATRVPPIAG---GVSGVDDAGVERVKVTST---------------- MMAR_3715|M.marinum_M VYVRATRVPPIAG---AAPAVPDDGAGSTPSAAQIGVGGQ---------- MUL_3658|M.ulcerans_Agy99 VYVRATRVPPIAG---AAPAVPDDGAGSTPRAAQIGVGGQ---------- MAV_1785|M.avium_104 VYVRATRVPPITAGATTVPAVSRDGADEATLTSA---------------- TH_2424|M.thermoresistible__bu VYVRATRVP----------ALPTGDVDERVAAR----------------- MAB_1655|M.abscessus_ATCC_1997 VYVRVTRVP---------------DVGELAEVAS---------------- MLBr_01089|M.leprae_Br4923 SELEVRENQFVARVSAESKMAIGESIELAFGTAKIAVFDADSGVNLTVSA : . Mflv_3138|M.gilvum_PYR-GCK ---- Mvan_3387|M.vanbaalenii_PYR-1 ---- MSMEG_3281|M.smegmatis_MC2_155 ---- Mb2419c|M.bovis_AF2122/97 ---- Rv2397c|M.tuberculosis_H37Rv ---- MMAR_3715|M.marinum_M ---- MUL_3658|M.ulcerans_Agy99 ---- MAV_1785|M.avium_104 ---- TH_2424|M.thermoresistible__bu ---- MAB_1655|M.abscessus_ATCC_1997 ---- MLBr_01089|M.leprae_Br4923 PTDA