For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRSVRQIVAVAAALVIAAAQVTGCTTGDDAVSQGGTFDFASPGGKTAIFYDPPSSRGTIGDLSGPDLFTD DPIRLSDYTGKVVLINVWGSWCAPCRTETPELETVYAEYRDRGVQFLGIDVRDNRDTARDFVTDRNVEYP SIFDPAMRSLITLGRTYPTSVVPTTMVLDRQHRVAAVYLMALLAEDLRPLLRSADHRALS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_2869 | - | - | 100% (200) | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
M. gilvum PYR-GCK | Mflv_0052 | - | 6e-64 | 60.10% (193) | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal |
M. gilvum PYR-GCK | Mflv_2812 | - | 2e-63 | 61.05% (190) | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0539 | - | 1e-60 | 59.59% (193) | thioredoxin protein |
M. tuberculosis H37Rv | Rv0526 | - | 1e-60 | 59.59% (193) | thioredoxin protein |
M. leprae Br4923 | MLBr_02412 | - | 3e-59 | 58.03% (193) | hypothetical protein MLBr_02412 |
M. abscessus ATCC 19977 | MAB_3976c | - | 3e-60 | 59.38% (192) | thioredoxin |
M. marinum M | MMAR_0872 | - | 1e-61 | 61.26% (191) | thioredoxin protein (thiol-disulfide interchange protein) |
M. avium 104 | MAV_4619 | - | 2e-60 | 57.95% (195) | hypothetical protein MAV_4619 |
M. smegmatis MC2 155 | MSMEG_0971 | - | 2e-62 | 60.43% (187) | hypothetical protein MSMEG_0971 |
M. thermoresistible (build 8) | TH_2251 | - | 5e-63 | 58.29% (187) | POSSIBLE THIOREDOXIN PROTEIN (THIOL-DISULFIDE INTERCHANGE |
M. ulcerans Agy99 | MUL_0625 | - | 1e-62 | 61.46% (192) | thioredoxin protein (thiol-disulfide interchange protein) |
M. vanbaalenii PYR-1 | Mvan_3240 | - | 1e-100 | 91.01% (189) | redoxin domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment MLBr_02412|M.leprae_Br4923 MIAPATMQSEAMRRSGATIIWRLANAGALLATLLAGCS-GRDAVVQGGTF MAV_4619|M.avium_104 ---------MSAR--------VLAMAGAVLAGLLTGCSSGHDAVAQGGTF Mb0539|M.bovis_AF2122/97 ------MQSRATRRSGALTMRRLVIAAAVSALLLTGCS-GRDAVAQGGTF Rv0526|M.tuberculosis_H37Rv ------MQSRATRRSGALTMRRLVIAAAVSALLLTGCS-GRDAVAQGGTF MMAR_0872|M.marinum_M -------------------MRRLVIAAAVLAALLTGCS-GRDAVVQGGTF MUL_0625|M.ulcerans_Agy99 -----------------MTMRRLVIAAAVLAALLTGCS-GRDAVVQGGTF MSMEG_0971|M.smegmatis_MC2_155 ------MQSWVAR----VVGVTLAALFAVLTGALAGCSTGDDAVAQGGTF TH_2251|M.thermoresistible__bu ----------VKR----LVVLLVGTAMLVLT----GCSTGDDAVAQGGTF MAB_3976c|M.abscessus_ATCC_199 -------------------MRLLVAALAALALFITACSTGDDAVARGGQF Mflv_2869|M.gilvum_PYR-GCK --------MRSVR-----QIVAVAAALVIAAAQVTGCTTGDDAVSQGGTF Mvan_3240|M.vanbaalenii_PYR-1 --------MTSLR-----RSVAVVAALVVATASVTGCTTGEDAVAQGGTF : : .*: * *** :** * MLBr_02412|M.leprae_Br4923 EFVSPDGKTDIFYEPPASRGRPGPLSGLDLADPERTVALDD--FTGNVVV MAV_4619|M.avium_104 EFVSPGGKTDIYYDPPSSRGRPGPLSGPDLADPAHTLSLDDPIFAGRVVV Mb0539|M.bovis_AF2122/97 EFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDD--FPGQVVV Rv0526|M.tuberculosis_H37Rv EFVSPGGKTDIFYDPPASRGRPGPLSGPELADPARSVSLDD--FPGQVVV MMAR_0872|M.marinum_M EFVSPGGKTDIFYDPPASRGHPGPLSGPDLIDPDRTLSLDD--FAGRVVV MUL_0625|M.ulcerans_Agy99 EFVSPGGKTDIFYDPPASRGHPGPLSGPDLIDPDRTLSLDD--FAGRVVV MSMEG_0971|M.smegmatis_MC2_155 EFVAPGGKTDIFYDPPQSRGRPGTLAGPLLTDPSKTISLDD--FAGEVVV TH_2251|M.thermoresistible__bu EFVAPGGQTDIFYDPPADRGRPGPISGPDLMNPDETISLDD--FAGQVVV MAB_3976c|M.abscessus_ATCC_199 QFVSPGGKTDILYDPPQSRQTPGPISGPSLLDPTKTLSLSD--FRGRVVV Mflv_2869|M.gilvum_PYR-GCK DFASPGGKTAIFYDPPSSRGTIGDLSGPDLFT-DDPIRLSD--YTGKVVL Mvan_3240|M.vanbaalenii_PYR-1 DFVSPGGKTAIFYDPPSTRGTIGNLSGPDLFT-DEPIRLSD--FTGKVVL :*.:*.*:* * *:** * * ::* * .: *.* : *.**: MLBr_02412|M.leprae_Br4923 INVWGQWCGPCRTEVTQLQQVYNATRDSGVSFLGIDVRDNNRQAAQDFVN MAV_4619|M.avium_104 INIWGQWCGPCRSEVSQLQQVYDATRGAGASFLGIDVRDNNRQAALDFVN Mb0539|M.bovis_AF2122/97 VNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFIN Rv0526|M.tuberculosis_H37Rv VNVWGQWCGPCRAEVSQLQRVYDATRGAGVSFLGIDVRDNNRQAPQDFIN MMAR_0872|M.marinum_M VNVWGQWCGPCRAEITQLQQVYDATRAAGVSFLGIDVRDNSRAAAQDFVR MUL_0625|M.ulcerans_Agy99 VNVWGQWCGPCRAEITQLQQVYDETRAAGVSFLGIDVRDNSRAAAQDFVR MSMEG_0971|M.smegmatis_MC2_155 VNVWGQWCGPCRAEITQLQEVHNATKDKGVAFLGIDVRDNNRDAAVDFVK TH_2251|M.thermoresistible__bu INIWGQWCGPCRTEILELQQVYDATRHQGVAFLGIDVRDNNIDAAQDFIA MAB_3976c|M.abscessus_ATCC_199 INVWGQWCGPCRSEFSALEDVYRATHAQGVEFLGINVRDNEITKAQDFVT Mflv_2869|M.gilvum_PYR-GCK INVWGSWCAPCRTETPELETVYAEYRDRGVQFLGIDVRDN-RDTARDFVT Mvan_3240|M.vanbaalenii_PYR-1 INVWGSWCAPCRTETPELETVYGEYRDRGVQFLGIDVRDN-RDTARDFVT :*:**.**.***:* *: *: : *. ****:**** . **: MLBr_02412|M.leprae_Br4923 DRQVTFPSIYDPAMRTLIAFGDKYPTTVIPFTLVLDRQHRVAAVFLRELL MAV_4619|M.avium_104 DRHVTFPSIYDPAMRTLIAFGGKYPTTVIPSTLVLDRQHRVAAVFLRELL Mb0539|M.bovis_AF2122/97 DRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELL Rv0526|M.tuberculosis_H37Rv DRHVTYPSIYDPAMRTLIAFGGKYPTSVIPSTLVLDRQHRVAAVFLRELL MMAR_0872|M.marinum_M DRHVTFPSIYDPAMRTLIAFGGKYPTTVIPSTLVLDRQHRVAAVFLRELL MUL_0625|M.ulcerans_Agy99 DRHVTFPSIYDPAMRTLIAFGGKYPTTVIPSTLVLDRQHRVAAVFLRELL MSMEG_0971|M.smegmatis_MC2_155 DRNVTFPSIYDPPMRTMIAFGGKYPTTVIPSTVVLDRQHRVAAVFLRELL TH_2251|M.thermoresistible__bu DRNITFPSIYDPPMRTMIAFGGRYPTTVIPSTVVLDREHRVAAVFLRELL MAB_3976c|M.abscessus_ATCC_199 DRKVPYPSIYDPSMRTLIAFGKKFPTGAIPATLVLDRQHRVAAVFLRELL Mflv_2869|M.gilvum_PYR-GCK DRNVEYPSIFDPAMRSLITLGRTYPTSVVPTTMVLDRQHRVAAVYLMALL Mvan_3240|M.vanbaalenii_PYR-1 DRNVQYPSIFDPAMRSLITLGRSYPTSVVPTTMVLDRQHRVAAVYLMALL **:: :***:**.**::*::* :** .:* *:****:******:* ** MLBr_02412|M.leprae_Br4923 AGDLQPVVARVAHETVAGQLPRGTS---- MAV_4619|M.avium_104 ATDLQPVVQRVAQQ--------------- Mb0539|M.bovis_AF2122/97 AADLQPVVERVAEEEPSGRAPVGAQ---- Rv0526|M.tuberculosis_H37Rv AADLQPVVERVAEEEPSGRAPVGAQ---- MMAR_0872|M.marinum_M AEDLQPVVQRLAQEPAAGSTPPGPQ---- MUL_0625|M.ulcerans_Agy99 AEDLQPVVQRLAQEPAAGSTPPGPQ---- MSMEG_0971|M.smegmatis_MC2_155 AEDLEPLIERLLAEPAEPGEPAVSKEQRP TH_2251|M.thermoresistible__bu AEDLQPVVERLAAEDPAPDGDAS------ MAB_3976c|M.abscessus_ATCC_199 AQDLRPVVERLAQESAKETAGEVK----- Mflv_2869|M.gilvum_PYR-GCK AEDLRPLLRSADHRALS------------ Mvan_3240|M.vanbaalenii_PYR-1 AEDLRPLLDRLTTER-------------- * **.*:: .