For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RAAMCREYGPPEVVRVEDVAEPVAGPGQIGVRVDAAAVNFPDVLLVAGTYQISVPPPFVPGSEFAGVVDE IGPGTEGFTIGDRVSGTAMFGAFAERTVVDAAALAPIPDGVDARTAAAFGVAYRTAYHTLRSVARVSEGD ELVVLGAGGGVGLAAVQLGVALGANVTAVASSAEKLAAAAEYGAAHLVDHREQDLRAALRTAVPDGADVV IDPVGGRLSEPALRSLGRGGRFVTVGFASGEIPRIPLNLVLLKGVQVLGFQFQDVPGDEFVRNDHELRAL LSARRVTPHVGAVYPLEEVAAALRHVGEGRAIGKVLIDVPA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_2449 | - | - | 100% (322) | alcohol dehydrogenase |
M. gilvum PYR-GCK | Mflv_0740 | - | 6e-44 | 33.74% (326) | alcohol dehydrogenase |
M. gilvum PYR-GCK | Mflv_4503 | - | 8e-41 | 35.35% (331) | alcohol dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0154 | - | 1e-42 | 34.05% (326) | putative quinone oxidoreductase (NADPH:quinone oxidoreductase) |
M. tuberculosis H37Rv | Rv0149 | - | 1e-42 | 34.05% (326) | quinone oxidoreductase |
M. leprae Br4923 | MLBr_00118 | - | 1e-31 | 29.35% (310) | putative oxidireductase |
M. abscessus ATCC 19977 | MAB_4603c | - | 2e-45 | 35.08% (325) | oxidoreductase |
M. marinum M | MMAR_5313 | - | 2e-93 | 54.49% (323) | quinone oxidoreductase |
M. avium 104 | MAV_0308 | - | 6e-91 | 55.42% (323) | alcohol dehydrogenase, zinc-binding |
M. smegmatis MC2 155 | MSMEG_4828 | - | 1e-125 | 71.56% (320) | alcohol dehydrogenase, zinc-binding |
M. thermoresistible (build 8) | TH_3212 | - | 1e-119 | 67.50% (320) | PUTATIVE Alcohol dehydrogenase, zinc-binding domain protein |
M. ulcerans Agy99 | MUL_4387 | - | 6e-92 | 54.49% (323) | quinone oxidoreductase |
M. vanbaalenii PYR-1 | Mvan_4202 | - | 1e-140 | 77.50% (320) | alcohol dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment Mb0154|M.bovis_AF2122/97 MKACVVKELSGPSGMVYTDIDEVSGDGGKVVIDVRAAGVCFPDLLLTKGE Rv0149|M.tuberculosis_H37Rv MKACVVKELSGPSGMVYTDIDEVSGDGGKVVIDVRAAGVCFPDLLLTKGE MAB_4603c|M.abscessus_ATCC_199 MKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGE Mflv_2449|M.gilvum_PYR-GCK MRAAMCREYGPPEVVRVEDVAEPVAGPGQIGVRVDAAAVNFPDVLLVAGT Mvan_4202|M.vanbaalenii_PYR-1 MRAAVCPQYGPPEVVRVEERPEPSAGPGQVVVRVEAAAVNFPDVLLVADS TH_3212|M.thermoresistible__bu MRAAVCTAHGPPEVVCIEERPAPGLLPGQVRVRVAAAGVNFPDVLLIAGR MSMEG_4828|M.smegmatis_MC2_155 MRAAVCPRYGPPEVVRVEELPVPELGPDQVRVRVGAAAVNFPDVLLVADR MMAR_5313|M.marinum_M MRAIVCNAYGPPEDLVLDEVPDPVPAPGQVLVRVRAAAVNFPDVLFIAGK MUL_4387|M.ulcerans_Agy99 MRAIVCDAYGPPEDLVLDEVPDPVPAPGQVLVRVRAVAVNFPDVLFIAGK MAV_0308|M.avium_104 MRAVVCRSYGTPEDLVLDEVPDPVPGPGQLLVRVRAAAVNFPDVLFIAGK MLBr_00118|M.leprae_Br4923 MHAIVAESAN---QMVWREVPDVTAGPGEVLIEVAASGVNRADVLQVAGK *:* . : : . : : * * .* .* * . Mb0154|M.bovis_AF2122/97 YQLKLTPPFVPGMETAGVVRSAPSDAG-FHVGERVSAFGVLGGYAEQIAV Rv0149|M.tuberculosis_H37Rv YQLKLTPPFVPGMETAGVVRSAPSDAG-FHVGERVSAFGVLGGYAEQIAV MAB_4603c|M.abscessus_ATCC_199 YQLKMEPPFVPGIETAGVVRSAPEGSG-IKPGDRVMAFNFIGGYAERVAV Mflv_2449|M.gilvum_PYR-GCK YQISVPPPFVPGSEFAGVVDEIGPGTEGFTIGDRVSGTAMFGAFAERTVV Mvan_4202|M.vanbaalenii_PYR-1 YQVSVAPPFVPGSEFTGVVDEIGPHTTGFTVGERVAGTGMFGAFAERVVA TH_3212|M.thermoresistible__bu YQLPVPPPFVPGSEFAGVIVETCGDTGGFAVGDPVTGTVLHGAFATEVAV MSMEG_4828|M.smegmatis_MC2_155 YQATVPVPFVPGSEFAGVVTETADGVTDFAVGDRVVGTGMHGAFAEEVCV MMAR_5313|M.marinum_M YQIKIPPPFIPGNEIAGEVVSVGAGVT-LVPGQRVFGT-TFGAFAELALL MUL_4387|M.ulcerans_Agy99 YQIKIPPPFVPGNEIAGEVVGAGAGVI-LVPGQRVFGT-TFGAFAELALL MAV_0308|M.avium_104 YQVKIPPPFIPGNEIAGEVIAAGEGAR-FLPGQRVAGT-TFGAFAEQALL MLBr_00118|M.leprae_Br4923 YPHPPGASAIIGMEVAGVVAAVSSGVTEWSVGQEVCALLAGGGYAEYVAV * . : * * :* : *: * . *.:* Mb0154|M.bovis_AF2122/97 PVANVVRSPVELDDAGAVSLLVNYNTMYFALARRAALRPGDTVLVLGAAG Rv0149|M.tuberculosis_H37Rv PVANVVRSPVELDDAGAVSLLVNYNTMYFALARRAALRPGDTVLVLGAAG MAB_4603c|M.abscessus_ATCC_199 APSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAG Mflv_2449|M.gilvum_PYR-GCK DAAALAPIPDGVDARTAAAFGVAYRTAYHTLRSVARVSEGDELVVLGAGG Mvan_4202|M.vanbaalenii_PYR-1 DAAGLTPVPDGVDARTAAAFGVAHRTAYHALRSTARLSAGDELVVLGAGG TH_3212|M.thermoresistible__bu PAAGLTRVPDGVPLRTAAAFGVAHRTAYHALRSMARLTAGQELIVLGAGS MSMEG_4828|M.smegmatis_MC2_155 DASCLQRAVERLDDRGAAASGVAHRTAFHALRSVARVSTGDDVVVLGAGG MMAR_5313|M.marinum_M DGAAAEPIPDDADFASAAAFGVTYRTAYHALRSVAQVSQGDWVVVLGAAG MUL_4387|M.ulcerans_Agy99 DGAAAQPIPDDADFASAAAFGVTYRTAYHALRSVAQVSQGDWVVVLGAAG MAV_0308|M.avium_104 DADQAEPIPDDADFASAAAFGVTYRTAYHALRSTAGVTAGDWVVVLGAAG MLBr_00118|M.leprae_Br4923 PASQVMPIPKGVNVVDSAGIPEVACTVWSNLVMAAHLSAGQLLLLHGGTS :.. * : . : *: ::: *. . Mb0154|M.bovis_AF2122/97 GVGTAAVQIAKAMQAGKVIAMVHREGAIDYVASLGADVVLPLTEGWAQQV Rv0149|M.tuberculosis_H37Rv GVGTAAVQIAKAMQAGKVIAMVHREGAIDYVASLGADVVLPLTEGWAQQV MAB_4603c|M.abscessus_ATCC_199 GIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAV Mflv_2449|M.gilvum_PYR-GCK GVGLAAVQLGVALGA-NVTAVASSAEKLAAAAEYGAAHLVDHREQDLRAA Mvan_4202|M.vanbaalenii_PYR-1 GVGLATVQLGVALGA-RVTAVASSNEKLAVAGGYGAATLINHRDGELRQA TH_3212|M.thermoresistible__bu GVGLAAVQLGVALGA-QVTAVASTAEKLAVAGAHGAGRRICHRDTDLRAA MSMEG_4828|M.smegmatis_MC2_155 GVGLAAVQIAAALGA-RVTAVASSSEKLDAAARYGAHHLVDHTAGPLRAA MMAR_5313|M.marinum_M GVGLAAVDLAVAMGA-RVLAAASSPEKLGLCRQRGAEAVVDYDQEDLKLR MUL_4387|M.ulcerans_Agy99 GVGLAAVDLAVAMGA-RVLAAASSPEKLGLCRQRGAEAVVDYDQEDLKLR MAV_0308|M.avium_104 GVGLAAVDLAVAMQA-RVLAAASSPEKLELCRRRGAEATVDYDREDLKTR MLBr_00118|M.leprae_Br4923 GIGSHGIQVARALGA-KVAVTAGSEEKLEFCRALGAQITINYRDEDFVAR *:* :::. .: * .* . . ** : Mb0154|M.bovis_AF2122/97 RDHTYGQGVDIVVDPIGGPTFDDALGVLAIDGKLLLIGFAAGAVPTLKVN Rv0149|M.tuberculosis_H37Rv RDHTYGQGVDIVVDPIGGPTFDDALGVLAIDGKLLLIGFAAGAVPTLKVN MAB_4603c|M.abscessus_ATCC_199 REATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAGGIPTIKVN Mflv_2449|M.gilvum_PYR-GCK LRTAVPDGADVVIDPVGGRLSEPALRSLGRGGRFVTVGFASGEIPRIPLN Mvan_4202|M.vanbaalenii_PYR-1 LRQAIPDGADVVVDPVGGDVSEPALRSLGRGGRFVSVGFASGVIPRIPLN TH_3212|M.thermoresistible__bu LREVLPGGADAVIDPVGGDLSEPALRSLRRGGRFVTVGYASGVIPRIPLN MSMEG_4828|M.smegmatis_MC2_155 LRDAVPDGADAVLDPVGGDLSEPALRALRRGGRFVTIGFASGAIPRIPLN MMAR_5313|M.marinum_M IRELTGESARVVLDPVGGSYAEPALRGLARGGMFVTLGYAAGSIPAIPLN MUL_4387|M.ulcerans_Agy99 IRELTGESARVVLDPVGGSYAEPALRGLARGGIFVTLGYAAGSIPAIPLN MAV_0308|M.avium_104 IRDLTGDRARVVLDPVGGPYSEPALRGLARGGTFVTLGYASGTIPAIPLN MLBr_00118|M.leprae_Br4923 LQQQN-GGADVILDIMGAAYLDRNIDALAIDGQLIVIGLQGGVKGELNLG . ::* :*. : : * * :: :* .* : :. Mb0154|M.bovis_AF2122/97 RLLVRNISVVGVGWGEYLNAVPGSAALFAWGLNQ----LVFLG-LRPPPP Rv0149|M.tuberculosis_H37Rv RLLVRNISVVGVGWGEYLNAVPGSAALFAWGLNQ----LVFLG-LRPPPP MAB_4603c|M.abscessus_ATCC_199 RLLLRNASLIGVAWGEFLRTHADYLYETQAGLEK----LVAEG-MRPPVS Mflv_2449|M.gilvum_PYR-GCK LVLLKGVQVLGFQFQDVP---GDEFVRNDHELRA----LLSARRVTPHVG Mvan_4202|M.vanbaalenii_PYR-1 LVLIKGVHVLGFQFQDVP---ADEFTRNEVELRE----LLVSGRVKPHVG TH_3212|M.thermoresistible__bu LVLVKGVHILGFQFQDVA---PEEFTRNEDELGG----FLVSGRARPHIG MSMEG_4828|M.smegmatis_MC2_155 LVLVKGVQILGFAFQDVP---PEEFARNESELGE----LLASGAVTPHIG MMAR_5313|M.marinum_M LVMLKNLTIRGMEIRTFMGDYPNECARDVAELSQ----MFAAGKIRPHIG MUL_4387|M.ulcerans_Agy99 LVMLKNLTIRGMEIRTFMGDYPDECARDVAELSQ----MFAAGKIRPHIG MAV_0308|M.avium_104 LVLLKDICVRGMEIRTFMTDRPDDAVRDLTELSQ----MFAAGTVRPYIG MLBr_00118|M.leprae_Br4923 KVLSKRARIIGSTLRARPVNGPNSKSEIVAAVTASIWPMIADGSVRPIIG :: : : * : :. * Mb0154|M.bovis_AF2122/97 QRYPLSEAQAALQSLDDGGVLGKVVLEP------------- Rv0149|M.tuberculosis_H37Rv QRYPLSEAQAALQSLDDGGVLGKVVLEP------------- MAB_4603c|M.abscessus_ATCC_199 ARIPLSEGRQALQDFADGKVYGKMVLVP------------- Mflv_2449|M.gilvum_PYR-GCK AVYPLEEVAAALRHVGEGRAIGKVLIDVPA----------- Mvan_4202|M.vanbaalenii_PYR-1 AVYSLDDTVAALRHVSDGRAIGKVVIDLS------------ TH_3212|M.thermoresistible__bu AVFPLSEAAAALRHVADGRAVGKVVIDLTD----------- MSMEG_4828|M.smegmatis_MC2_155 AVYPLVEVAAALRHVAEGRAVGKVVLDVSRVR--------- MMAR_5313|M.marinum_M ARFPLADTPAALRYVAERKVLGKVVIDVV------------ MUL_4387|M.ulcerans_Agy99 ARFPLADTPAALRYVAERKVLGKVVIDVA------------ MAV_0308|M.avium_104 ARFPLARTAAALRHVADRKVLGKVVIDVA------------ MLBr_00118|M.leprae_Br4923 ARMAVQQAADAHQLLLSGKVSGKIVLTVAGSGTETLLSRHH .: * : . . . **:::