For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MVPMSGDPTADRIWADLATFVHDHRDYWKKAVVERTGLPFSRIRILMRLSRTPMTVKQIAAAATVDAPAA TVAVNDLEDRGLVVRRVDPSNRRCKTVSLTDAGREMVGEIDAVHDPAPEALAALTSEDLAALRRLVDLLV D
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1731 | - | - | 100% (141) | MarR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_0641 | - | 7e-43 | 64.62% (130) | MarR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_2729 | - | 3e-07 | 31.82% (110) | MarR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0043c | - | 1e-07 | 37.37% (99) | MarR family transcriptional regulator |
M. tuberculosis H37Rv | Rv0042c | - | 1e-07 | 37.37% (99) | MarR family transcriptional regulator |
M. leprae Br4923 | MLBr_02696 | - | 7e-06 | 34.69% (98) | putative MarR-family regulatory protein |
M. abscessus ATCC 19977 | MAB_0946 | - | 2e-40 | 60.94% (128) | putative transcription regulator protein, MarR |
M. marinum M | MMAR_2939 | - | 2e-09 | 36.04% (111) | transcriptional regulatory protein |
M. avium 104 | MAV_2081 | - | 9e-08 | 32.69% (104) | transcriptional regulator, MarR family protein |
M. smegmatis MC2 155 | MSMEG_5668 | - | 2e-43 | 64.57% (127) | putative transcriptional regulator |
M. thermoresistible (build 8) | TH_0263 | - | 1e-07 | 30.70% (114) | transcriptional regulator, MarR family protein |
M. ulcerans Agy99 | MUL_0657 | - | 1e-06 | 28.87% (97) | transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_5020 | - | 1e-53 | 74.26% (136) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1731|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_5020|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5668|M.smegmatis_MC2_155 -------------------------------------------------- MAB_0946|M.abscessus_ATCC_1997 -------------------------------------------------- Mb0043c|M.bovis_AF2122/97 ---MSVVRSIG-KKMQRISGPNALAVKG---------------------- Rv0042c|M.tuberculosis_H37Rv ---MSVVRSIG-KKMQRISGPNALAVKG---------------------- MLBr_02696|M.leprae_Br4923 MFSYITTKSWNPGNQSRYSRPRRLSAYNGLYPKYFDVLDFTNDDPLHPAP MAV_2081|M.avium_104 -------------------------------------------------- MMAR_2939|M.marinum_M -------------------------------------------------- TH_0263|M.thermoresistible__bu -------------------------------------------------- MUL_0657|M.ulcerans_Agy99 ------------------------------------------MAGCRGPA Mflv_1731|M.gilvum_PYR-GCK -----------------------MVPMSGDP----------TADRIWADL Mvan_5020|M.vanbaalenii_PYR-1 --------------------------MSGNP----------LADDVWRDL MSMEG_5668|M.smegmatis_MC2_155 --------------------------MPGELAQDTAAVTAVHADDVWRAL MAB_0946|M.abscessus_ATCC_1997 --------------------------MSDRS----------LADEVWRSM Mb0043c|M.bovis_AF2122/97 ---RPTQVYGHT------HVRLDCRFMADSEFTAP--EVTQLAEGLHRAL Rv0042c|M.tuberculosis_H37Rv ---RPTQVYGHT------HVRLDCRFMADSEFTAP--EVTQLAEGLHRAL MLBr_02696|M.leprae_Br4923 PHLRPPLQLAHTRSLNARHIALNCRLMADSEFTAH--EVTELADGLHRAL MAV_2081|M.avium_104 -----------------------MDNVVDTAKLEG-------GQGLGADL MMAR_2939|M.marinum_M --------------MSGTRKVPQLPQPIETTRQETLKWVAASAPGLAVDD TH_0263|M.thermoresistible__bu --------------------------VADDLAMEF-------GDNLLWHL MUL_0657|M.ulcerans_Agy99 IYTLLTMSSSCRYCRVHAGLHYRRVRAGQTGANVASARKLTAVAAISATL : Mflv_1731|M.gilvum_PYR-GCK ATFVHDHRD------YWKKAVVERTGLPFSRIRILMRLSRT---PMTVKQ Mvan_5020|M.vanbaalenii_PYR-1 AALVLDHRD------GWKRAVVEQSGLPFSRIRILKRLSKT---PMSVKQ MSMEG_5668|M.smegmatis_MC2_155 TAIVYDNRD------SWKRAVIERSGLPFSRIRVLRRLARR---PMSVKE MAB_0946|M.abscessus_ATCC_1997 ASLVLDNRD------SWRRTVVETTGLPFSRVRILRRLARQ---SLTMKA Mb0043c|M.bovis_AF2122/97 SKLISMLRR------GDPNGAAAG-DLTLAQLSILVTLLDQG--PIRMTD Rv0042c|M.tuberculosis_H37Rv SKLISMLRR------GDPNGAAAG-DLTLAQLSILVTLLDQG--PIRMTD MLBr_02696|M.leprae_Br4923 SKLFSILRR------RTPNGAVSG-ELTLAQLSILVTLLDQG--PIRMTD MAV_2081|M.avium_104 LAVVARLNR------LATQRIQMP--LPAAQARLLATIEAHG--EARIGD MMAR_2939|M.marinum_M AELGTALFAGSVRLVRTVESHLQRYGLSSGRFAVLITLGAAPEGRHTPSA TH_0263|M.thermoresistible__bu KQAWYFSLT-------AVNDAVSKHGVSTAQIGVLRQLSNEP--GLSGAE MUL_0657|M.ulcerans_Agy99 AQIVRLSISR---SAFAGQASAANTELSQPSYVLLRVLIDEG--PLPLSR . :. :* : Mflv_1731|M.gilvum_PYR-GCK IAAAATVDAPAATVAVNDLEDRGLVVRRVDPSNRRCKTVSLTDAGREMVG Mvan_5020|M.vanbaalenii_PYR-1 LAEAATIDAPAATVAVNDLEQRGLVVRTVDPSNRRCKTVSLTEAGRDTLR MSMEG_5668|M.smegmatis_MC2_155 VAHAATMDPPAATVAVNDLEERGLVTRQVDPANRRCKTVSITQAGLALWK MAB_0946|M.abscessus_ATCC_1997 IAEAVSLDAPAATVAVSDLERRGLVVRRVDPDNRRCKRVSLTDEGSELVA Mb0043c|M.bovis_AF2122/97 LAAHERVRTPTTTVAIRRLEKIGLVKRSRDPSDLRAVLVDITPQGRAVHG Rv0042c|M.tuberculosis_H37Rv LAAHERVRTPTTTVAIRRLEKIGLVKRSRDPSDLRAVLVDITPQGRAVHG MLBr_02696|M.leprae_Br4923 LAAHERVRTPTTTVAIRRLEKIGLVKRSRDLSDLRAVLVDITPRGRTVHG MAV_2081|M.avium_104 LAAVDHCSQPTMTTQVRRLEEAGLVTRTVDPGDARAVRIRITAEGRRTLN MMAR_2939|M.marinum_M IAERIAVRRPTVTGIVNGLESAGLVRRSADPTSRRNQLVELTERGRRLVA TH_0263|M.thermoresistible__bu LARRLLITPQGVQLALKSLEQRGLIERRPDPQHARILKVYLTREGRSVAK MUL_0657|M.ulcerans_Agy99 LARLAHMDAGMATRRVRALVEAGLVTRHTDPNDGRVSVIEATPQGRRAAG :* : * **: * * * : * * Mflv_1731|M.gilvum_PYR-GCK E-IDAVHDPAPEALAALTSEDLAALRRLVDLLVD---------------- Mvan_5020|M.vanbaalenii_PYR-1 A-IDAVHDPAPDMLAALGDDDLAALRVILDKLDAG--------------- MSMEG_5668|M.smegmatis_MC2_155 E-IEAVDDPAPEPLAALDPEDLQTLHAILSKVSGR--------------- MAB_0946|M.abscessus_ATCC_1997 R-IAGLDDPAPAGLSALAEADLRSLRALLEKATASHR------------- Mb0043c|M.bovis_AF2122/97 ESLANRRAALAALLSQLPRSDLETLRKALAPLERLASGEPASGPASNSPA Rv0042c|M.tuberculosis_H37Rv ESLANRRAALAALLSQLPRSDLETLRKALAPLERLASGEPASGPASNSPA MLBr_02696|M.leprae_Br4923 ESLANRRAALTTMLSQLPTSDLNILKNALAPLQRLASGEPVSSPAGDSPA MAV_2081|M.avium_104 AVRADRAAAIQPQLALLDAEDRQVLRQAVDVLRRLLDNASLASSLAGRRQ MMAR_2939|M.marinum_M EIAPDHFGRLAAAMGEFTPAERDTLRAAMGLLDRFGEVLLDERDA----- TH_0263|M.thermoresistible__bu AVVGDAIAAHEAVFGVLTPEEQRTLRDLLARVVEKGTGHTLADDHITD-- MUL_0657|M.ulcerans_Agy99 ALHEVRRDHLARALSGWSAAELHEFNRLLSKFLTDIKKTPIVDTATR--- :. : :. : Mflv_1731|M.gilvum_PYR-GCK --------------- Mvan_5020|M.vanbaalenii_PYR-1 --------------- MSMEG_5668|M.smegmatis_MC2_155 --------------- MAB_0946|M.abscessus_ATCC_1997 --------------- Mb0043c|M.bovis_AF2122/97 RKRA----------- Rv0042c|M.tuberculosis_H37Rv RKRA----------- MLBr_02696|M.leprae_Br4923 CKQA----------- MAV_2081|M.avium_104 TSLRLVAGPGARVDT MMAR_2939|M.marinum_M --------------- TH_0263|M.thermoresistible__bu --------------- MUL_0657|M.ulcerans_Agy99 ---------------