For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PGELAQDTAAVTAVHADDVWRALTAIVYDNRDSWKRAVIERSGLPFSRIRVLRRLARRPMSVKEVAHAAT MDPPAATVAVNDLEERGLVTRQVDPANRRCKTVSITQAGLALWKEIEAVDDPAPEPLAALDPEDLQTLHA ILSKVSGR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_5668 | - | - | 100% (149) | putative transcriptional regulator |
| M. smegmatis MC2 155 | MSMEG_0188 | - | 1e-08 | 28.91% (128) | MarR-family protein transcriptional regulator |
| M. smegmatis MC2 155 | MSMEG_0538 | - | 2e-07 | 30.68% (88) | regulatory protein, MarR |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2354 | - | 3e-06 | 32.99% (97) | hypothetical protein Mb2354 |
| M. gilvum PYR-GCK | Mflv_0641 | - | 2e-44 | 64.12% (131) | MarR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv2327 | - | 3e-06 | 32.99% (97) | hypothetical protein Rv2327 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0946 | - | 1e-40 | 57.25% (131) | putative transcription regulator protein, MarR |
| M. marinum M | MMAR_3627 | - | 6e-07 | 32.99% (97) | hypothetical protein MMAR_3627 |
| M. avium 104 | MAV_2081 | - | 3e-07 | 36.08% (97) | transcriptional regulator, MarR family protein |
| M. thermoresistible (build 8) | TH_0263 | - | 3e-09 | 31.19% (109) | transcriptional regulator, MarR family protein |
| M. ulcerans Agy99 | MUL_1238 | - | 4e-07 | 32.99% (97) | hypothetical protein MUL_1238 |
| M. vanbaalenii PYR-1 | Mvan_5020 | - | 2e-46 | 66.92% (130) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_5668|M.smegmatis_MC2_155 MPGELAQDTAAVTAVHADDVWRALTAIVYDNRDSWKRAVIE--RSGLPFS
Mvan_5020|M.vanbaalenii_PYR-1 MSGNP----------LADDVWRDLAALVLDHRDGWKRAVVE--QSGLPFS
Mflv_0641|M.gilvum_PYR-GCK MSRNP----------EADEVWRAMTALVTDNRDSWRRATVD--QTGLPFS
MAB_0946|M.abscessus_ATCC_1997 MSDRS----------LADEVWRSMASLVLDNRDSWRRTVVE--TTGLPFS
Mb2354|M.bovis_AF2122/97 MSPSPAAANRS----EVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAA
Rv2327|M.tuberculosis_H37Rv MSPSPAAANRS----EVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAA
MMAR_3627|M.marinum_M MTSS-ATANQA----QVA---HGLGADLLAVVARLNRLATQRIQMPLPSA
MUL_1238|M.ulcerans_Agy99 MTSS-ATANQA----QVA---HGLGADLLAVVARLNRLATQRIQMPLPSA
MAV_2081|M.avium_104 MDNVVDTAKLE----GGQ----GLGADLLAVVARLNRLATQRIQMPLPAA
TH_0263|M.thermoresistible__bu VADDLAME-------FGDNLLWHLKQAWYFSLTAVNDAVSK---HGVSTA
: : . . . :. :
MSMEG_5668|M.smegmatis_MC2_155 RIRVLRRLARR-PMSVKEVAHAATMDPPAATVAVNDLEERGLVTRQVDPA
Mvan_5020|M.vanbaalenii_PYR-1 RIRILKRLSKT-PMSVKQLAEAATIDAPAATVAVNDLEQRGLVVRTVDPS
Mflv_0641|M.gilvum_PYR-GCK RIRILLRLSRG-SMTVKEVAHAVTIDPPAATVAVNDLEDRGLVMRQTIPT
MAB_0946|M.abscessus_ATCC_1997 RVRILRRLARQ-SLTMKAIAEAVSLDAPAATVAVSDLERRGLVVRRVDPD
Mb2354|M.bovis_AF2122/97 QARLLATIEAQGEARIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPG
Rv2327|M.tuberculosis_H37Rv QARLLATIEAQGEARIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPG
MMAR_3627|M.marinum_M QARLLATIEAQGEARIGDLAAVDHCSQPTMTTQVRRLEDAGMVTRTVDPG
MUL_1238|M.ulcerans_Agy99 QARLLATIEAQGEARIGDLAAVDHCSQPTMTTQVRRLEDAGMVTRTVDPG
MAV_2081|M.avium_104 QARLLATIEAHGEARIGDLAAVDHCSQPTMTTQVRRLEEAGLVTRTVDPG
TH_0263|M.thermoresistible__bu QIGVLRQLSNEPGLSGAELARRLLITPQGVQLALKSLEQRGLIERRPDPQ
: :* : :* : ** *:: * *
MSMEG_5668|M.smegmatis_MC2_155 NRRCKTVSITQAGLALWKEIEAVDDPAPEP-LAALDPEDLQTLHAILSKV
Mvan_5020|M.vanbaalenii_PYR-1 NRRCKTVSLTEAGRDTLRAIDAVHDPAPDM-LAALGDDDLAALRVILDKL
Mflv_0641|M.gilvum_PYR-GCK NRRYKVVSLTDAGWSMVATINAVDDPAPEA-LAALEGNELRALRDAIARV
MAB_0946|M.abscessus_ATCC_1997 NRRCKRVSLTDEGSELVARIAGLDDPAPAG-LSALAEADLRSLRALLEKA
Mb2354|M.bovis_AF2122/97 DARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLADAVDVL
Rv2327|M.tuberculosis_H37Rv DARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLADAVDVL
MMAR_3627|M.marinum_M DARAVRIRITPEGMRTLSAVRTDRAAAIEPQLARLEPSDRQVLADAVEVL
MUL_1238|M.ulcerans_Agy99 DARAVRIRITPEGMRTLSAVRTDRAAAIEPQLARLEPSDRQVLAGAVEVL
MAV_2081|M.avium_104 DARAVRIRITAEGRRTLNAVRADRAAAIQPQLALLDAEDRQVLRQAVDVL
TH_0263|M.thermoresistible__bu HARILKVYLTREGRSVAKAVVGDAIAAHEAVFGVLTPEEQRTLRDLLARV
. * : :* * : .* :. * : * :
MSMEG_5668|M.smegmatis_MC2_155 SGR------------------------------
Mvan_5020|M.vanbaalenii_PYR-1 DAG------------------------------
Mflv_0641|M.gilvum_PYR-GCK SAARQTLNESRGRIAQRTTLSPA----------
MAB_0946|M.abscessus_ATCC_1997 TASHR----------------------------
Mb2354|M.bovis_AF2122/97 RRLLDHAATTP---GRATRQ-------------
Rv2327|M.tuberculosis_H37Rv RRLLDHAATTP---GRATRQ-------------
MMAR_3627|M.marinum_M RRLLDNAAATP---GRNTL--------------
MUL_1238|M.ulcerans_Agy99 RRLLDNAAATP---GRNTL--------------
MAV_2081|M.avium_104 RRLLDNASLASSLAGRRQTSLRLVAGPGARVDT
TH_0263|M.thermoresistible__bu VEKGTGHTLADDHITD-----------------