For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ESDPEDQGNEPPEINFDEHLHPARPRSLRFRPRVRTPFTRRSLSRDGSPTGDNPAYVSWLISQSMLADAN EISQQFSGQGSMWQNPYATPSARGAVETASVWFTAYPLSLITRSNESFLKAMADADMWKAFAEIGIEAVH TGPVKRAGGISGWELTPSVDGHFDRISTQIDPAFGTEDEFRQMCGTANWYGGTIIDDIVPGHTGKGADFR LAEMKYADYPGIYHMVEVDPRDWEHLPEVPAGADSVNIDSDTEDWLDKAGYIIGKLQRVIFYAEGIKETN WSVTRPVVGIDGVERRWVYLHYFKDGQPSINWLDPSFAGMRLVIGDALHSLTDLGTGGLRLDANGFLGAE KTAAEDSAAWSEGHPLSEAANHLIASMVRKVGGFTFQELNLTIDDIREIGEAGADLSYDFITRPGVQHAL ATADTEFLRLTLRTTLELGVDPASLVHALQNHDELTYELVHWSNGHRDDLFPYKGEEVTGEVLGDIVRTD LREKLSGDNAPYNLVFTTNGIACTSATIIAATLGITSLDDITEPEQIDRIRRAHLLLAMFNALQPGVFAL SGWDVCGMLTLPSSTIPELLREGDTRWIHRAAHDLMGVNPEATQSPAGMPRGRSLYGSIPEQLADDTSFL RQLQAILKVRSHYGIATSRQIDIPEVSQRGMLVLVHHLDTDNQYQLTVLNFANEDVTGTVRSKKLPPGSE VSDMFSGRHLATVDDLHSFSVELTAHQGLSLLVEAPAEDTDAD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1577 | - | - | 100% (744) | trehalose synthase |
M. gilvum PYR-GCK | Mflv_3723 | - | 3e-09 | 22.54% (346) | alpha amylase, catalytic region |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0131 | treS | 9e-07 | 26.33% (319) | trehalose synthase TRES |
M. tuberculosis H37Rv | Rv0126 | treS | 9e-07 | 26.33% (319) | trehalose synthase TRES |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_0325 | treS | 6e-07 | 27.67% (318) | trehalose synthase TreS |
M. avium 104 | MAV_5186 | treS | 1e-06 | 25.79% (318) | trehalose synthase |
M. smegmatis MC2 155 | MSMEG_6515 | treS | 7e-08 | 27.13% (317) | trehalose synthase |
M. thermoresistible (build 8) | TH_1780 | treS | 2e-07 | 26.73% (318) | trehalose synthase |
M. ulcerans Agy99 | MUL_4797 | treS | 3e-07 | 27.67% (318) | trehalose synthase TreS |
M. vanbaalenii PYR-1 | Mvan_5178 | - | 0.0 | 91.03% (747) | trehalose synthase |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_6515|M.smegmatis_MC2_155 -------------MEEH-TQGSHVEAG----IVEHPNAEDFGHARTLPTD TH_1780|M.thermoresistible__bu MESTSEPDRR---TEHHRSEGSHVEHGPAGSVVEHPTADDFGQARVLPED Mb0131|M.bovis_AF2122/97 ---MNEAEHS---VEHPPVQGSHVEGG----VVEHPDAKDFGSAAALPAD Rv0126|M.tuberculosis_H37Rv ---MNEAEHS---VEHPPVQGSHVEGG----VVEHPDAKDFGSAAALPAD MMAR_0325|M.marinum_M --MMNEATNT---IEHNPAEGSHVEGG----VVEHPDAKDFGNAAALPAD MUL_4797|M.ulcerans_Agy99 MELMNEATNT---IEHNPAEGSHVEGG----MVEHPDAKDFGNAAPLPAD MAV_5186|M.avium_104 ---MNDAREA---VEHHPEEGSHVQDG----VVEHPEAEDFDNAAALPTD Mflv_1577|M.gilvum_PYR-GCK MESDPEDQGN---EPPEINFDEHLHPARPRSLRFRPRVRTPFTRRSLSRD Mvan_5178|M.vanbaalenii_PYR-1 MESEPEDQGTDSSESPELTFDEHLHPARPRSLRFRPRVRAPFTRRSLARD ..*:. . : :* . *. * MSMEG_6515|M.smegmatis_MC2_155 --TNWFKHAVFYEVLVRAFYDSNADGIGDLRG------------------ TH_1780|M.thermoresistible__bu --PTWYKHAVFYEVLVRAFYDSNADGIGDLRG------------------ Mb0131|M.bovis_AF2122/97 --PTWFKHAVFYEVLVRAFFDASADGSGDLRG------------------ Rv0126|M.tuberculosis_H37Rv --PTWFKHAVFYEVLVRAFFDASADGSGDLRG------------------ MMAR_0325|M.marinum_M --PTWFKHAVFYEVLVRAFYDGTADGSGDLRG------------------ MUL_4797|M.ulcerans_Agy99 --PTWFKHAVFYEVLVRAFYDGTADGSGDLRG------------------ MAV_5186|M.avium_104 --PTWFKHAVFYEVLVRAFFDANADGAGDLRG------------------ Mflv_1577|M.gilvum_PYR-GCK GSPTGDNPAYVSWLISQSMLADANEISQQFSGQGSMWQNPYATPSARGAV Mvan_5178|M.vanbaalenii_PYR-1 GSPTGDNPAYVSWLISQSMLADANEISQQFSGQGSMWQNPYATPSPRGAV .. : * . :: ::: : :: * MSMEG_6515|M.smegmatis_MC2_155 ----------------------LTEKLDYIKWLGVDCLWLPPFYDSPLRD TH_1780|M.thermoresistible__bu ----------------------LTEQLDYLKWLGVDCLWLPPFYDSPLRD Mb0131|M.bovis_AF2122/97 ----------------------LIDRLDYLQWLGIDCIWLPPFYDSPLRD Rv0126|M.tuberculosis_H37Rv ----------------------LIDRLDYLQWLGIDCIWLPPFYDSPLRD MMAR_0325|M.marinum_M ----------------------LMQRLDYLQWLGIDCIWLPPFYDSPLRD MUL_4797|M.ulcerans_Agy99 ----------------------LMQRLDYLQWLGIDCIWLPPFYDSPLRD MAV_5186|M.avium_104 ----------------------LLAQLDYLQWLGIDCIWLPPFYDSPLRD Mflv_1577|M.gilvum_PYR-GCK ETASVWFTAYPLSLITRSNESFLKAMADADMWKAFAEIGIEAVHTGPVKR Mvan_5178|M.vanbaalenii_PYR-1 ETASVWFTAYPLSLITRSNESFLKAMADVEMWKAFAEIGIEAVHTGPVKR * * * .. : : ..: .*:: MSMEG_6515|M.smegmatis_MC2_155 GG-------------YDIRDFYKVLPEFGTVDDFVTLLDAAHRRGIRIIT TH_1780|M.thermoresistible__bu GG-------------YDIRDFYKVLPEFGTVDDFVNLLDAAHRRGIRIIT Mb0131|M.bovis_AF2122/97 GG-------------YDIRDFYKVLPEFGTVDDFVALVDAAHRRGIRIIT Rv0126|M.tuberculosis_H37Rv GG-------------YDIRDFYKVLPEFGTVDDFVALVDAAHRRGIRIIT MMAR_0325|M.marinum_M GG-------------YDIRDFYKVLPEFGTVGDFVALVDAAHRRGIRVIT MUL_4797|M.ulcerans_Agy99 GG-------------YDIRDFYKVLPEFGTVGDFVALVDAAHRRGIRVIT MAV_5186|M.avium_104 GG-------------YDIRDFYKVLPEFGTVEDFVALLNAAHERGIRVIT Mflv_1577|M.gilvum_PYR-GCK AGGISGWELTPSVDGHFDRISTQIDPAFGTEDEFRQMCGTANWYGGTIID Mvan_5178|M.vanbaalenii_PYR-1 AGGISGWELTPSVDGHFDRISTEIDPAFGTEDEFRQMCGTANWYGGTIID .* : * :: * *** :* : .:*: * :* MSMEG_6515|M.smegmatis_MC2_155 DLVMNHTSDQHEWFQESRHNPDGP------YGDFYVWSDTSDRYPDARII TH_1780|M.thermoresistible__bu DLVMNHTSDTHPWFEESRRDPDGP------YGDFYVWSDTAEKYSQARII Mb0131|M.bovis_AF2122/97 DLVMNHTSESHPWFQESRRDPDGP------YGDYYVWSDTSERYTDARII Rv0126|M.tuberculosis_H37Rv DLVMNHTSESHPWFQESRRDPDGP------YGDYYVWSDTSERYTDARII MMAR_0325|M.marinum_M DLVMNHTSESHPWFQESRHDPDGP------YGDYYVWSDSSEKYTDARII MUL_4797|M.ulcerans_Agy99 DLVMNHTSESHPWFQESRHDPDGP------YGDYYVWSDSSEKYTDARII MAV_5186|M.avium_104 DLVMNHTSESHPWFQESRHDPDGP------YGDFYVWSDTSDRYADARII Mflv_1577|M.gilvum_PYR-GCK DIVPGHTGKGADFRLAEMKYADYPGIYHMVEVDPRDWEHLPEVPAGADSV Mvan_5178|M.vanbaalenii_PYR-1 DIVPGHTGKGADFRLAEMKYADYPGIYHMVEVDPRDWEHLPDVPPGADSV *:* .**.. : . : .* * * *.. .: . * : MSMEG_6515|M.smegmatis_MC2_155 FVDTEESNWTFDP----------------------------------VRR TH_1780|M.thermoresistible__bu FVDTEESNWTFDP----------------------------------VRR Mb0131|M.bovis_AF2122/97 FVDTEESNWSFDP----------------------------------VRR Rv0126|M.tuberculosis_H37Rv FVDTEESNWSFDP----------------------------------VRR MMAR_0325|M.marinum_M FVDTEESNWTFDP----------------------------------VRR MUL_4797|M.ulcerans_Agy99 FVDTEESNWTFDP----------------------------------VRR MAV_5186|M.avium_104 FVDTEESNWTFDP----------------------------------VRR Mflv_1577|M.gilvum_PYR-GCK NIDSDTEDWLDKAGYIIGKLQRVIFYAEGIKETNWSVTRPVVGIDGVERR Mvan_5178|M.vanbaalenii_PYR-1 NIDPATEQWLDKAGYIIGKLQRVIFYAEGIKETNWSVTRPVVGIDGVERR :*. .:* .. ** MSMEG_6515|M.smegmatis_MC2_155 QFYWHRFFSHQPDLNYDNP---AVQEAMLDVLRFWLDLGIDGFRLDAVPY TH_1780|M.thermoresistible__bu QFYWHRFFSHQPDLNYDNP---AVQEAMLDVLRFWLDLGIDGFRLDAVPY Mb0131|M.bovis_AF2122/97 QFYWHRFFSHQPDLNYDNP---AVQEAMIDVIRFWLGLGIDGFRLDAVPY Rv0126|M.tuberculosis_H37Rv QFYWHRFFSHQPDLNYDNP---AVQEAMIDVIRFWLGLGIDGFRLDAVPY MMAR_0325|M.marinum_M QFYWHRFFSHQPDLNYDNP---AVQEAMIDVLRFWLGLGIDGFRLDAVPY MUL_4797|M.ulcerans_Agy99 QFYWHRFFSHQPDLNYDNP---AVQEAMIDVLRFWLGLGIDGFRLDAVPY MAV_5186|M.avium_104 QFYWHRFFSHQPDLNYDNP---AVQEAMIDVIRFWLGLGIDGFRLDAVPY Mflv_1577|M.gilvum_PYR-GCK WVYLHYFKDGQPSINWLDPSFAGMRLVIGDALHSLTDLGTGGLRLDANGF Mvan_5178|M.vanbaalenii_PYR-1 WVYLHYFKDGQPSINWLDPSFAGMRLVIGDALHSLTDLGTGGLRLDANGF .* * * . **.:*: :* .:: .: *.:: .** .*:**** : MSMEG_6515|M.smegmatis_MC2_155 LFEREGTNCENLPETHAFLKRCRKAIDDEYPGRVLLAEANQWPADVVAYF TH_1780|M.thermoresistible__bu LFEREGTNCENLPETHAFLKRCRKVVDDEYPGRVLLAEANQWPADVVAYF Mb0131|M.bovis_AF2122/97 LFEREGTNCENLPETHAFLKRVRKVVDDEFPGRVLLAEANQWPGDVVEYF Rv0126|M.tuberculosis_H37Rv LFEREGTNCENLPETHAFLKRVRKVVDDEFPGRVLLAEANQWPGDVVEYF MMAR_0325|M.marinum_M LFEREGTNCENLPETHAFLKRVRKVVDDEFPGRVLLAEANQWPADVVEYF MUL_4797|M.ulcerans_Agy99 LFEREGTNCENLPETHAFLKRVRKVVDDEFPGRLLLAEANQWPADVVEYF MAV_5186|M.avium_104 LFEREGTNCENLPETHAFLKRVRKVVDDEFPGRVLLAEANQWPADVVEYF Mflv_1577|M.gilvum_PYR-GCK LGAEKTAAEDSAAWSEG--HPLSEAANHLIASMVRKVGGFTFQELNLTID Mvan_5178|M.vanbaalenii_PYR-1 LGAEKTAAEDSAAWSEG--HPLSEAANHLIASMVRKVGGFTFQELNLTID * .: : :. . :.. : :. :. .. : . . : : MSMEG_6515|M.smegmatis_MC2_155 GDPDTGGDECHMAFHFPLMPRIFMAVR-RESRFPISEILAQTPPIPDTAQ TH_1780|M.thermoresistible__bu GDPAVGGDECHMAFHFPLMPRIFMAVR-RESRFPISEILAQTPDIPETAQ Mb0131|M.bovis_AF2122/97 GDPNTGGDECHMAFHFPLMPRIFMAVR-RESRFPISEIIAQTPPIPDMAQ Rv0126|M.tuberculosis_H37Rv GDPNTGGDECHMAFHFPLMPRIFMAVR-RESRFPISEIIAQTPPIPDMAQ MMAR_0325|M.marinum_M GEASTGGDECHMAFHFPLMPRIFMAVR-RESRFPISEILAKTPPIPDMAQ MUL_4797|M.ulcerans_Agy99 GEASTGGDECHMAFHFPLMPRIFMAVR-RESRFPISEILAKTPPIPDMAQ MAV_5186|M.avium_104 GDPSTGGDECHMAFHFPLMPRIFMAVR-RESRFPISEILAQTPQIPEMAQ Mflv_1577|M.gilvum_PYR-GCK DIREIGEAGADLSYDFITRPGVQHALATADTEFLRLTLRTTLELGVDPAS Mvan_5178|M.vanbaalenii_PYR-1 DIREIGEAGADLSYDFITRPAAHHALATADTEFLRLTLRTTLELGVDPAS . * ..:::.* * *: ::.* : : : *. MSMEG_6515|M.smegmatis_MC2_155 WGIFLRNHDELTLEMVTDEE--RDYMYAEYAKDPRMKAN-VGIRRRLAPL TH_1780|M.thermoresistible__bu WGIFLRNHDELTLEMVTDEE--RDYMYAEYAKDPRMKAN-VGIRRRLAPL Mb0131|M.bovis_AF2122/97 WGIFLRNHDELTLEMVTDEE--RDYMYAEYAKDPRMKAN-VGIRRRLAPL Rv0126|M.tuberculosis_H37Rv WGIFLRNHDELTLEMVTDEE--RDYMYAEYAKDPRMKAN-VGIRRRLAPL MMAR_0325|M.marinum_M WGIFLRNHDELTLEMVTDEE--RDYMYAEYAKDPRMKAN-VGIRRRLAPL MUL_4797|M.ulcerans_Agy99 WGIFLRNHDELTLEMVTDEE--RDYMYAEYAKDPRMKAN-VGIRRRLAPL MAV_5186|M.avium_104 WGIFLRNHDELTLEMVTDEE--RDYMYAEYAKDPRMKAN-VGIRRRLAPL Mflv_1577|M.gilvum_PYR-GCK LVHALQNHDELTYELVHWSNGHRDDLFPYKGEEVTGEVLGDIVRTDLREK Mvan_5178|M.vanbaalenii_PYR-1 LVHALQNHDELTYELVHWSTGHRDDVYTYKGEEITGEVLGETIRSDLSEK *:****** *:* . ** ::. .:: :. :* * MSMEG_6515|M.smegmatis_MC2_155 LENDRNQIELFTALLLSLPGSPVLYYGDEIGMGDIIWLGDRDSVRTPMQW TH_1780|M.thermoresistible__bu LENDRNQIELFTALLLSLPGSPVIYYGDEIGMGDIIWLGDRDAVRTPMQW Mb0131|M.bovis_AF2122/97 LDNDRNQIELFTALLLSLPGSPVLYYGDEIGMGDVIWLGDRDGVRIPMQW Rv0126|M.tuberculosis_H37Rv LDNDRNQIELFTALLLSLPGSPVLYYGDEIGMGDVIWLGDRDGVRIPMQW MMAR_0325|M.marinum_M LENDRNQIQLFNALLLSLPGSPVLYYGDEIGMGDVIWLGDRDGVRTPMQW MUL_4797|M.ulcerans_Agy99 LENDRNQIQLFNALLLSLPGSPVLYYGDEIGMGDVIWLGDRDGVRTPMQW MAV_5186|M.avium_104 LDNDRNQIELFTALLLSLPGSPVLYYGDEIGMGDVIWLGDRDGVRTPMQW Mflv_1577|M.gilvum_PYR-GCK LSGDNAPYNLVFTTNG-IACTSATIIAATLGITSLDDITEPEQIDR-IRR Mvan_5178|M.vanbaalenii_PYR-1 LTGENAPYNLVFTTNG-IACTTATVIAATLGIAALDDIVDDEQIDR-IRR * .:. :*. : :. :.. . :*: : : : : : :: MSMEG_6515|M.smegmatis_MC2_155 TPDRNAGFSKATP-----------GRLYLPPN--------------QDAV TH_1780|M.thermoresistible__bu TPDRNAGFSKANP-----------GRLYLPVN--------------QDPI Mb0131|M.bovis_AF2122/97 TPDRNAGFSTANP-----------GRLYLPPS--------------QDPV Rv0126|M.tuberculosis_H37Rv TPDRNAGFSTANP-----------GRLYLPPS--------------QDPV MMAR_0325|M.marinum_M TPDRNAGFSTANP-----------GRLYLPPS--------------QDSV MUL_4797|M.ulcerans_Agy99 TPDRNAGFSTANP-----------GRLYLPPS--------------QDSV MAV_5186|M.avium_104 TPDRNAGFSKANP-----------GRLYLPPS--------------QDPV Mflv_1577|M.gilvum_PYR-GCK AHLLLAMFNALQPGVFALSGWDVCGMLTLPSSTIPELLREGDTRWIHRAA Mvan_5178|M.vanbaalenii_PYR-1 AHLLLAMFNALQPGVFALSGWDVCGMLTLPPSQITELLHGGDTRWIHRAA : * *. * * * ** . : . MSMEG_6515|M.smegmatis_MC2_155 YGYHSVNVEAQLDSS-------------------SSLLNWTRNMLAVRSR TH_1780|M.thermoresistible__bu YGYQSVNVEAQRDSS-------------------TSLLNWTRKMLAVRRR Mb0131|M.bovis_AF2122/97 YGYQAVNVEAQRDTS-------------------TSLLNFTRTMLAVRRR Rv0126|M.tuberculosis_H37Rv YGYQAVNVEAQRDTS-------------------TSLLNFTRTMLAVRRR MMAR_0325|M.marinum_M YGYQAVNVEAQRDTS-------------------TSLLNWTRTMLAVRRR MUL_4797|M.ulcerans_Agy99 YGYQAVNVEAQRDTS-------------------TSLLNWTRTMLAVRRR MAV_5186|M.avium_104 YGYQAVNVEAQRDTS-------------------TSLLNFTRTMLAVRRR Mflv_1577|M.gilvum_PYR-GCK HDLMGVNPEATQSPAGMPRGRSLYGSIPEQLADDTSFLRQLQAILKVRSH Mvan_5178|M.vanbaalenii_PYR-1 HDLMGVNPTATRSPAGMPRGRSLYGSIPDQLAEDTSFLRQLQAILKVRSH :. .** * ..: :*:*. : :* ** : MSMEG_6515|M.smegmatis_MC2_155 HDAFAVGTFRELGGSNPSVLAYIREVTRQQGDGGAKTDAVLCVNNLSRFP TH_1780|M.thermoresistible__bu HRAFAVGDFRELGGSNPSVLAFIRELEE---DG--QKDTVLCVNNLSRFP Mb0131|M.bovis_AF2122/97 HPAFAVGAFQELGGSNPSVLAYVRQVAG------DDGDTVLCVNNLSRFP Rv0126|M.tuberculosis_H37Rv HPAFAVGAFQELGGSNPSVLAYVRQVAG------DDGDTVLCVNNLSRFP MMAR_0325|M.marinum_M HNAFAVGTFQELGGSNPSILAYVREAPGP---AGEDGDVVLCVNNLSRFP MUL_4797|M.ulcerans_Agy99 HNAFAVGTFQELGGSNPSILAYVREAPGP---AGEDGDVVLCVNNLSRFP MAV_5186|M.avium_104 HEAFAIGTFEELGGSNPSVLAFVRQVSN-------DGDTVLCVNNLSRFP Mflv_1577|M.gilvum_PYR-GCK YGIATSRQIDIPEVSQRGMLVLVHHLDTD------NQYQLTVLNFANEDV Mvan_5178|M.vanbaalenii_PYR-1 YGIATSRQIDIPEVSHRGMLVLVHQLHEE------GRYQLTVLNFANEDV : : : *: .:*. ::. : :* .. MSMEG_6515|M.smegmatis_MC2_155 QPIELNLQQWAGYIPVEMTGYVEFPSIGQLP-YLLTLPGHGFYWFQLREP TH_1780|M.thermoresistible__bu QPIELQLQNWSGYTPVEMTGYVEFPRIGQLP-YLLTLPGHGFYWFQLREP Mb0131|M.bovis_AF2122/97 QPIELDLQQWTNYTPVELTGHVEFPRIGQVP-YLLTLPGHGFYWFQLTTH Rv0126|M.tuberculosis_H37Rv QPIELDLQQWTNYTPVELTGHVEFPRIGQVP-YLLTLPGHGFYWFQLTTH MMAR_0325|M.marinum_M QPIELNLQQWNSYTPVELTGQVEFPKIGHLP-YLLTLPGHGFYWFQLSAS MUL_4797|M.ulcerans_Agy99 QPIELNLQQWNSYTPVELTGQVEFRKIGHLP-YLLTLPGHGFYWFQLSAS MAV_5186|M.avium_104 QPIELNLQHWSGCIPVELTGHVEFPRIGHLP-YLLTLPGHGFYWFQLTAC Mflv_1577|M.gilvum_PYR-GCK TGTVRSKKLPPGSEVSDMFSGRHLATVDDLHSFSVELTAHQGLSLLVEAP Mvan_5178|M.vanbaalenii_PYR-1 AGTVRSLKLPPGSEVSDMFSGRPLATVDDLHSFGVELTAHQGLSLLVEAP . : . :: . : :..: : : *..* : : MSMEG_6515|M.smegmatis_MC2_155 DPEP-----GAQQ- TH_1780|M.thermoresistible__bu EPEV-----GEQP- Mb0131|M.bovis_AF2122/97 EVGAPPTCGGERRL Rv0126|M.tuberculosis_H37Rv EVGAPPTCGGERRL MMAR_0325|M.marinum_M EE--------ER-- MUL_4797|M.ulcerans_Agy99 EE--------ER-- MAV_5186|M.avium_104 EEDT---------- Mflv_1577|M.gilvum_PYR-GCK AEDTDAD------- Mvan_5178|M.vanbaalenii_PYR-1 VPDAGTEGDHVQ--