For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPLMTPKTKSDSGTSRFSVGHAVDWNLAATVGGKLARQEPKATDYTRRQAIEQLAQSARDSEIPVREVTG LIEGGEIPEARIVNRPDWIRAAAQSMRAMTGGAHDGDVKPRMITGRVAGAQTGAVLAFVSSGILGQYDPF SGDGELLLVYPNVIAVERQLRVVPEDFRMWVCLHEVTHRVQFRANPWLAEHMSGALAVLTEDGGEDLTAM VGRLADYVRDHQVVVKNGEPELNSTGIIGLLRAVQSEPQRQALDRLLVLGTLLEGHAEHVMDAVGPAVVP SVATIRQRFDQRRQRKQPPLQRLLRILLGVDAKMSQYTKGKAFVDEVVGTVGMERFNAIWTDADTLPQPQ EIDEPQRWIDRVL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1410 | - | - | 100% (363) | hypothetical protein Mflv_1410 |
M. gilvum PYR-GCK | Mflv_4656 | - | 6e-13 | 21.43% (280) | hypothetical protein Mflv_4656 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3650c | - | 1e-129 | 65.63% (355) | hypothetical protein Mb3650c |
M. tuberculosis H37Rv | Rv3626c | - | 1e-129 | 65.63% (355) | hypothetical protein Rv3626c |
M. leprae Br4923 | MLBr_00642 | - | 1e-12 | 21.43% (252) | hypothetical protein MLBr_00642 |
M. abscessus ATCC 19977 | MAB_0520 | - | 1e-131 | 67.82% (348) | hypothetical protein MAB_0520 |
M. marinum M | MMAR_5126 | - | 1e-132 | 65.92% (358) | hypothetical protein MMAR_5126 |
M. avium 104 | MAV_0530 | - | 1e-132 | 67.98% (356) | hypothetical protein MAV_0530 |
M. smegmatis MC2 155 | MSMEG_6112 | - | 1e-149 | 73.86% (352) | hypothetical protein MSMEG_6112 |
M. thermoresistible (build 8) | TH_1411 | - | 1e-141 | 68.09% (376) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_4202 | - | 1e-132 | 65.64% (358) | hypothetical protein MUL_4202 |
M. vanbaalenii PYR-1 | Mvan_5379 | - | 1e-173 | 84.23% (355) | hypothetical protein Mvan_5379 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3650c|M.bovis_AF2122/97 ----------------------------------------------MTGA Rv3626c|M.tuberculosis_H37Rv ----------------------------------------------MTGA MMAR_5126|M.marinum_M ----------------------------------------------MTAA MUL_4202|M.ulcerans_Agy99 ----------------------------------------------MTAA MAV_0530|M.avium_104 ----------------------------------------------MTPA Mflv_1410|M.gilvum_PYR-GCK ------------------------------------MPLMTPKTKSDSGT Mvan_5379|M.vanbaalenii_PYR-1 --------------------------------------------MSSSSK MSMEG_6112|M.smegmatis_MC2_155 -----------------------------------------------MSR TH_1411|M.thermoresistible__bu -------------------------------------------VPDMTSE MAB_0520|M.abscessus_ATCC_1997 ---------------------------------MAESGRVVQSGGVGTKS MLBr_00642|M.leprae_Br4923 MAHSGSPVSTVDGVANPPFGFSSGNDSPNDESGRDKHGKNGPDSGSSGSD Mb3650c|M.bovis_AF2122/97 SELTLGNTVDWEFAAS------VGERLARP----------APPSTEYTRR Rv3626c|M.tuberculosis_H37Rv SELTLGNTVDWEFAAS------VGERLARP----------APPSTEYTRR MMAR_5126|M.marinum_M SDVTLGNTVDWQFAAT------VGERLARP----------GPPSSDYTRR MUL_4202|M.ulcerans_Agy99 SDVTLGNTVDWQFAAT------VGERLARP----------GPPSSDYTRR MAV_0530|M.avium_104 PDLTLGTAVDWRFAAT------VGRRLARP----------GPPSTDYTRR Mflv_1410|M.gilvum_PYR-GCK SRFSVGHAVDWNLAAT------VGGKLARQ----------EPKATDYTRR Mvan_5379|M.vanbaalenii_PYR-1 SGFTVGRAVDWKLAAT------LGGKLARP----------EPPATDYTRK MSMEG_6112|M.smegmatis_MC2_155 PTMTAGRAVDWDFAAS------VGAKLARP----------EPPSTDYTRR TH_1411|M.thermoresistible__bu RRLTVGRAVDWEFAAD------VGARLARP----------GPTTTDYTRR MAB_0520|M.abscessus_ATCC_1997 PELTVGRMVNWEFAAT------VGVKLARP----------APPTTEYTRR MLBr_00642|M.leprae_Br4923 PLASFGMSGDFGMSDLGQIFTHLGQMFTNAGTAMTADKQLGPVNYELARR : * :: :: :* ::. * : :*: Mb3650c|M.bovis_AF2122/97 QVIDELTVAAEK---AEPPVRDVTGLIAD-----GVVPPARVVDR----P Rv3626c|M.tuberculosis_H37Rv QVIDELTVAAEK---AEPPVRDVTGLIAD-----GVVPPARVVDR----P MMAR_5126|M.marinum_M QAVDELMRAAEQ---AEPPVRDVTGLITT-----GDVPAARVVDR----P MUL_4202|M.ulcerans_Agy99 QAVDELMRAAEQ---AEPPVRDVTGLITT-----GDVPAGRVVDR----P MAV_0530|M.avium_104 QVIDELAGAATK---AEPLVRQVTGLLTDGAD-DGRVPAARIVDR----P Mflv_1410|M.gilvum_PYR-GCK QAIEQLAQSARD---SEIPVREVTGLIEG-----GEIPEARIVNR----P Mvan_5379|M.vanbaalenii_PYR-1 QAFEQLAEAARA---SELPVREVTGLIEG-----GEIPEARIVNR----P MSMEG_6112|M.smegmatis_MC2_155 QAIDQLSESARA---AELPVREVTGLNEG-----AEVPEARVVDR----P TH_1411|M.thermoresistible__bu QAIEQLAELSRT---AEVPVREVTGLIEG-----DEIPEARIVDR----P MAB_0520|M.abscessus_ATCC_1997 QAIAELSDAARR---AETPVREVTGLADG-----LLVPEARVIDR----P MLBr_00642|M.leprae_Br4923 VASSSIGFVAPIPATTSSAIGDAVHLAETWLDGVTALPAGTTKAEGWTPD . .: : :. : :.. * :* . . Mb3650c|M.bovis_AF2122/97 AWIRSAAESMRAMTH-------------GSAKPRG----------FLTGR Rv3626c|M.tuberculosis_H37Rv AWIRSAAESMRAMTH-------------GSAKPRG----------FLTGR MMAR_5126|M.marinum_M EWIRAAAESMRAMTN-------------GAEKPRG----------LLTGR MUL_4202|M.ulcerans_Agy99 EWIRAAAESMRAMTN-------------GAEKPRG----------LLTGR MAV_0530|M.avium_104 EWIAAAAESMRVMMN-------------GTERPRG----------FLTGR Mflv_1410|M.gilvum_PYR-GCK DWIRAAAQSMRAMTG-------------GAHDGDV-------KPRMITGR Mvan_5379|M.vanbaalenii_PYR-1 EWIHAAAQSMRAMTG-------------GGHADDV-------KPRAVTGR MSMEG_6112|M.smegmatis_MC2_155 AWIRAATRSMRVMTT-------------GGDTGDS--DANGDKPGFITGR TH_1411|M.thermoresistible__bu QWIRAASASMRVMTG-------------GATSADTNGEKSGAAAGFIAGK MAB_0520|M.abscessus_ATCC_1997 GWISAAAQSMRLMAG-------------GGEGATG----------FLSGR MLBr_00642|M.leprae_Br4923 DWVNNTLETWKRLCDPMAQQISTVWAASLPEEAKSMASPLLSMMSQMGGM *: : : : : : * Mb3650c|M.bovis_AF2122/97 ITGAQTGAVLAFVASGILGQYDPFGAA-------------------GEGC Rv3626c|M.tuberculosis_H37Rv ITGAQTGAVLAFVASGILGQYDPFGAA-------------------GEGC MMAR_5126|M.marinum_M ITGAQTGAVLAFVASGILGQYDPFAAADAA----------------GMGG MUL_4202|M.ulcerans_Agy99 ITGAQTGAVLAFVASGILGQYDPFAAADGA----------------GMGG MAV_0530|M.avium_104 VTGAQTGAVLAYVSSGILGQYDPFATDRGA----------------GAGC Mflv_1410|M.gilvum_PYR-GCK VAGAQTGAVLAFVSSGILGQYDPFS---------------------GDGE Mvan_5379|M.vanbaalenii_PYR-1 IAGAQTGAVLAFVSSGILGQYDPFAV--------------------GGGE MSMEG_6112|M.smegmatis_MC2_155 VTGAQTGAVLAFISSGILGQYDPFGP--------------------DGGE TH_1411|M.thermoresistible__bu LTGAQTGAVLAFISSGILGQYDPFAPRGRERGADGGRAGDDPGGPRSGGE MAB_0520|M.abscessus_ATCC_1997 VTGAQTGAVLAFVSSGILGQYDPFTAD-------------------GAGA MLBr_00642|M.leprae_Br4923 AFGSQLGQAFGQLSREVLTSTDIGLPLG------------------PRGV *:* * .:. :: :* . * * Mb3650c|M.bovis_AF2122/97 LLLVYPNVIAVERQLRVEPSDFRLWVCLHEVTHRVQFTANPWLSGYMSQA Rv3626c|M.tuberculosis_H37Rv LLLVYPNVIAVERQLRVEPSDFRLWVCLHEVTHRVQFTANPWLSGYMSQA MMAR_5126|M.marinum_M LLLVYPNVIAVERQLRVDPSDFRLWVCLHEVAHRVQFTANPWLAGYMQQA MUL_4202|M.ulcerans_Agy99 LLLVYPNVIAVERQLRVDPSDFRLWVCLHEVAHRVQFTANPWLAGYMQQA MAV_0530|M.avium_104 LLLVYPNVIAVERQLRIEPSDFRLWVCLHEVTHRVQFTANPWLPGYMSQA Mflv_1410|M.gilvum_PYR-GCK LLLVYPNVIAVERQLRVVPEDFRMWVCLHEVTHRVQFRANPWLAEHMSGA Mvan_5379|M.vanbaalenii_PYR-1 LLLVYPNVIAVERQLRVAPKDFRMWVCLHEVTHRVQFRANPWLADHMSKA MSMEG_6112|M.smegmatis_MC2_155 LLLVYPNVISVERQLRVAPADFRLWVCLHEVTHRVQFRANPWLADHMSQA TH_1411|M.thermoresistible__bu LLLVYPNVIAVERQLRVVPADFRLWVCLHEVTHRVQFRANPWLAEHMSRA MAB_0520|M.abscessus_ATCC_1997 LLLVYPNVIAVERQLRVVPSDFRMWVCLHEVTHRVQFSANPWLADYMSGT MLBr_00642|M.leprae_Br4923 AAIMPQAVESFADGLEQPRCEILTFLATREAAHHRLFSHVPWLASQLLGA :: * :. *. :: ::. :*.:*: * ***. : : Mb3650c|M.bovis_AF2122/97 LNLLTFEPVDDIGRVVSRLADFIRSRGHG--TDDSEVNPSGILGLVRAVQ Rv3626c|M.tuberculosis_H37Rv LNLLTFEPVDDIGRVVSRLADFIRSRGHG--TDDSEVNPSGILGLVRAVQ MMAR_5126|M.marinum_M LGLLTTEPADDIGQVVSRLANFVRNRDDP--GDDS-GNVTGILGVVRAVQ MUL_4202|M.ulcerans_Agy99 LGLLTTEPADDIGQVVSRLANFVRNRDDP--GDDS-GNVTGILGVVRAVQ MAV_0530|M.avium_104 LALLTRDTGDDLGQVLSRLADYARNRGNT--ASQADANSTGILGLVRAVQ Mflv_1410|M.gilvum_PYR-GCK LAVLTEDGGEDLTAMVGRLADYVRDHQVVVKNGEPELNSTGIIGLLRAVQ Mvan_5379|M.vanbaalenii_PYR-1 LAVLTEDAGEDLPQVVGRLVDYVRDREVVVKNSEPAMNSTGVLGLLRAVQ MSMEG_6112|M.smegmatis_MC2_155 LAVLTQDAGDDVAALAGRLAQYVRDQRGT-NGSAPEPNSTGILGLMRAVQ TH_1411|M.thermoresistible__bu LAVLTQDVTEEATAVIARLAEFLRNRR---TYVETEPNSTGVLGLVRAVQ MAB_0520|M.abscessus_ATCC_1997 LATLAHEQEEDVAGMLGRLADFVRSSRSQ--------GHNGIVELLRAMQ MLBr_00642|M.leprae_Br4923 VEAYAAGMKIDMNGIEELARDFNPASLSD----PTAIEELLGQGVFEPQA : : : : :: :... Mb3650c|M.bovis_AF2122/97 SEPQRKALDQLLVLGTLLEGHAEHVMDAVGPMVVPSVATIRRRFDDRRHH Rv3626c|M.tuberculosis_H37Rv SEPQRKALDQLLVLGTLLEGHAEHVMDAVGPMVVPSVATIRRRFDDRRHH MMAR_5126|M.marinum_M SEPQRQALDQLLALGTLLEGHAEHVMDAVGPMVVPSVAVIRRRFDERRQR MUL_4202|M.ulcerans_Agy99 SEPQRQALDQLLALGTLLEGHAEHVMDAVGPMVVPSVAVIRRRFDERRQR MAV_0530|M.avium_104 SEPQRQALDQLLVLGTLLEGHADHVMDAVGPMAVPSVATIRRRFDERRHR Mflv_1410|M.gilvum_PYR-GCK SEPQRQALDRLLVLGTLLEGHAEHVMDAVGPAVVPSVATIRQRFDQRRQR Mvan_5379|M.vanbaalenii_PYR-1 SEPQREALDRLLVLGTLLEGHAEHVMDAVGPAVVPSVASIRHRFDQRRQR MSMEG_6112|M.smegmatis_MC2_155 AEPQRRALDQLLVLGTLLEGHADHVMDAVGPAVVPTVGTIRRRFDERRQR TH_1411|M.thermoresistible__bu AEPQRRALDQLLVLGTLLEGHAEHVMDAVGPAVVPTVSVIRRRFDERRQR MAB_0520|M.abscessus_ATCC_1997 SDSGRDALDRLLVLGTLLEGHADHVMDAVGPAVVPSVASIRSRFEARRSR MLBr_00642|M.leprae_Br4923 TPAQTQALERLEALLALIEGWVQVVVTAALGDRIPGAAALGETLRRRRAS : . **::* .* :*:** .: *: *. :* .. : : ** Mb3650c|M.bovis_AF2122/97 KQPPLQRLVRALLGFDAKLSQYTRGKAFVDHVVDRAGMKLFNTIWSGPET Rv3626c|M.tuberculosis_H37Rv KQPPLQRLVRALLGFDAKLSQYTRGKAFVDHVVDRAGMKLFNTIWSGPET MMAR_5126|M.marinum_M KQPPLQRLLRALLGFDAKLNQYTRGKAFVDDVVARVGMKRFNTIWTSPQT MUL_4202|M.ulcerans_Agy99 KQPPLQRLLRALLGFDAKLNQYTRGKAFVDDVVARVGMKRFNTIWTSPQT MAV_0530|M.avium_104 KQPPLQRLLRALLGLDAKLSQYTRGKAFVDQVVGRVGMARFNAVWTGPET Mflv_1410|M.gilvum_PYR-GCK KQPPLQRLLRILLGVDAKMSQYTKGKAFVDEVVGTVGMERFNAIWTDADT Mvan_5379|M.vanbaalenii_PYR-1 RQPPLQRLLRALLGVDAKMSQYTRGKAFVDHVVAEVGMQRFNAIWTDAET MSMEG_6112|M.smegmatis_MC2_155 KQPPVQRIVRALLGFDAKLSQYTRGKAFVDHVVSAVGMQRFNTVWTNAET TH_1411|M.thermoresistible__bu RQPPLQRLVRALLGVDAKISQYTRGKAFVDHVVAKVGMDRFNRVWESPET MAB_0520|M.abscessus_ATCC_1997 KQPPLQRIIRALIGMDAKMRQYTRGKKFVDHVVGKVGMERFNTIWRDPQT MLBr_00642|M.leprae_Br4923 GGP-AEQTFATLVGLELRPRKLREAAVLWERLTQAAGVDARDAVWQHPDL * :: . *:*.: : : .. : : :. .*: : :* .: Mb3650c|M.bovis_AF2122/97 LPLPAEIENPQRWIDRVL-------------------------------- Rv3626c|M.tuberculosis_H37Rv LPLPAEIENPQRWIDRVL-------------------------------- MMAR_5126|M.marinum_M LPLPAELENPRRWIDRVL-------------------------------- MUL_4202|M.ulcerans_Agy99 LPLPAELENPRRWIDRVL-------------------------------- MAV_0530|M.avium_104 LPLPVEIEEPQRWIDRVL-------------------------------- Mflv_1410|M.gilvum_PYR-GCK LPQPQEIDEPQRWIDRVL-------------------------------- Mvan_5379|M.vanbaalenii_PYR-1 LPKPAEIDEPQRWIDRVL-------------------------------- MSMEG_6112|M.smegmatis_MC2_155 LPLPTEIDEPQRWIDRVL-------------------------------- TH_1411|M.thermoresistible__bu LPLPAEIEEPHRWIDRVL-------------------------------- MAB_0520|M.abscessus_ATCC_1997 LPQPAEIEDPDQWIDRVL-------------------------------- MLBr_00642|M.leprae_Br4923 LPSGKDLDDPASFIDRIIGGDTSGIDEAIAKLDLDRGNSDGRTPGSGGPV ** ::::* :***:: Mb3650c|M.bovis_AF2122/97 -- Rv3626c|M.tuberculosis_H37Rv -- MMAR_5126|M.marinum_M -- MUL_4202|M.ulcerans_Agy99 -- MAV_0530|M.avium_104 -- Mflv_1410|M.gilvum_PYR-GCK -- Mvan_5379|M.vanbaalenii_PYR-1 -- MSMEG_6112|M.smegmatis_MC2_155 -- TH_1411|M.thermoresistible__bu -- MAB_0520|M.abscessus_ATCC_1997 -- MLBr_00642|M.leprae_Br4923 DN