For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MNHPVQFVGAGPGAADLLTVRAARLLADAGLVLYPGTYLDPDVLAHCSPSADLVDTGNLDLDTIVARLVD GHRGGVAVVRLVSGDPSVYSAVSEQTRRLDAAGVPWQVTPGVPAYAAAAARVGRELTVPLVAQSVVLTRT RARSTQMPDTESLAAFAATRATLVLHLAITRIRELMAEIEGDYGPDCPVVVVYRASQPQEIVLRGTVSDI ADAVESAGLRQAAVILVGRALAGRPDPEAGESYLYDASRDRSGRDR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_0352 | - | - | 100% (256) | precorrin-4 C11-methyltransferase |
| M. gilvum PYR-GCK | Mflv_4047 | - | 6e-24 | 33.19% (238) | uroporphyrin-III C-methyltransferase |
| M. gilvum PYR-GCK | Mflv_0065 | - | 3e-10 | 24.74% (291) | uroporphyrinogen III synthase HEM4 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2097c | cobM | 2e-60 | 51.63% (246) | precorrin-4 C11-methyltransferase CobM |
| M. tuberculosis H37Rv | Rv2071c | cobM | 6e-60 | 51.22% (246) | precorrin-4 C11-methyltransferase CobM |
| M. leprae Br4923 | MLBr_02420 | hemD | 3e-10 | 27.18% (287) | putative uroporphyrin-III C-methyltransferase |
| M. abscessus ATCC 19977 | MAB_2196 | - | 9e-60 | 50.00% (248) | precorrin-4 C11-methyltransferase CobM |
| M. marinum M | MMAR_3053 | cobM | 5e-60 | 50.81% (246) | precorrin-4 C11-methyltransferase, CobM |
| M. avium 104 | MAV_2425 | cobM | 8e-58 | 50.00% (254) | precorrin-4 C11-methyltransferase |
| M. smegmatis MC2 155 | MSMEG_3877 | cobM | 6e-64 | 51.79% (251) | precorrin-4 C11-methyltransferase |
| M. thermoresistible (build 8) | TH_0443 | cobM | 4e-65 | 52.59% (251) | Probable precorrin-4 C11-methyltransferase CobM |
| M. ulcerans Agy99 | MUL_2297 | cobM | 4e-59 | 50.41% (246) | precorrin-4 C11-methyltransferase, CobM |
| M. vanbaalenii PYR-1 | Mvan_0382 | - | 1e-122 | 89.60% (250) | uroporphyrin-III C/tetrapyrrole methyltransferase |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0352|M.gilvum_PYR-GCK ------------MN-HPVQFVGAGPGAADLLTVRAARLLADAGLVLYPGT
Mvan_0382|M.vanbaalenii_PYR-1 ------------MNDRAVQFVGAGPGAADLLTVRAARFLADAELVLYPGT
MSMEG_3877|M.smegmatis_MC2_155 ---------------MTVYFIGAGPGAADLITVRGQRLLGTCKVCLYAGS
TH_0443|M.thermoresistible__bu ---------VVGDETMTVYFIGAGPGAADLITVRGQRLLSRCPVCLYAGS
Mb2097c|M.bovis_AF2122/97 ---------------MTVYFIGAGPGAADLITVRGQRLLQRCPVCLYAGS
Rv2071c|M.tuberculosis_H37Rv ---------------MTVYFIGAGPGAADLITVRGQRLLQRCPVCLYAGS
MMAR_3053|M.marinum_M ---------------MTVYFIGAGPGAADLITLRGQRLLQSCPVCLYAGS
MUL_2297|M.ulcerans_Agy99 ---------------MTVYFIGAGPGAADLITLRGQRLLQSCPVCLYAGS
MAV_2425|M.avium_104 ---------------MTVYFIGAGPGAADLITVRGQRLLQSCPVCLYAGS
MAB_2196|M.abscessus_ATCC_1997 MEISSARSSVEHRKIMTVYFIGAGPGAADLITVRGQRILRQCSVCLYAGS
MLBr_02420|M.leprae_Br4923 MVGATMTTRGRKLRPGRITFVGAGPGAPGLLTAQAVAVLANAALVFIDPD
: *:******..*:* :. .* . : :
Mflv_0352|M.gilvum_PYR-GCK YLD----------PDVLAHCSPSADLVDTGNLDLDTIVARLVDGH----R
Mvan_0382|M.vanbaalenii_PYR-1 YLD----------AAVLAHCSPDADLVDTENLDLDTIVARLVDGH----R
MSMEG_3877|M.smegmatis_MC2_155 IMP----------DDLLALCPPDAKVIDTGPLNLDQIIDELVAAD----E
TH_0443|M.thermoresistible__bu IMP----------DDLLALCPPDARIVDTGPLTLDQIVAELADAH----A
Mb2097c|M.bovis_AF2122/97 IMP----------DDLLAQCPPGATIVDTGPLTLEQIVRKLADAD----A
Rv2071c|M.tuberculosis_H37Rv IMP----------DDLLAQCPPGATIVDTGPLTLEQIVRKLADAD----A
MMAR_3053|M.marinum_M IMP----------DDLLAYCPPEAKVVDTGPLTLEQIITELAAAH----A
MUL_2297|M.ulcerans_Agy99 IMP----------DDLLAYCPVEAKVVDTGPLTLEQIITELAAAH----A
MAV_2425|M.avium_104 IMP----------DDLLALCPPDARIVDTGPLTLDQIITELSQAH----A
MAB_2196|M.abscessus_ATCC_1997 IMP----------DDLLAECPPGARVVDTGPLTLDAIIEEISAAD----A
MLBr_02420|M.leprae_Br4923 VPEPVLALIGKDLPPVSGPAPAGPAAVTAGRAADGTLEGDHYQAAPMVMS
: . .. . : : : .
Mflv_0352|M.gilvum_PYR-GCK GGVAVVRLVSGDPSVYSAVSEQTRR-LDAAGVPWQVTPGVPAYAAAAARV
Mvan_0382|M.vanbaalenii_PYR-1 AGLRVVRLVSGDPSVYSALSEQTRR-LDAVRVPWEVTPGVPAYAAAAARV
MSMEG_3877|M.smegmatis_MC2_155 AGLDVARLHSGDPSIYSALAEQCRR-LDALGIGYEIVPGVPAFAAVAAAL
TH_0443|M.thermoresistible__bu RGLDVARLHSGDPAIYSALAEQCRR-LDALGIDYEIVPGVPAFAAAAAAL
Mb2097c|M.bovis_AF2122/97 DGRDVARLHSGDPSLYSALAEQCRE-LDALGIGYEIVPGVPAFAAAAAAL
Rv2071c|M.tuberculosis_H37Rv DGRDVARLHSGDPSLYSALAEQCRE-LDALGIGYEIVPGVPAFAAAAAAL
MMAR_3053|M.marinum_M AGHDVARLHSGDPSLYSALAEQCRR-LDALGIGYEIVPGVPAFAAAAAAL
MUL_2297|M.ulcerans_Agy99 AGHDVARLHSGDPSLYSALAEQCRR-LDALGIGYEIVPGVPAFAAAAAAL
MAV_2425|M.avium_104 AGHDVARLHSGDPSLYSALAEQCRR-LDALGIDYEIVPGVPAFAAAAAAL
MAB_2196|M.abscessus_ATCC_1997 EGLDVARLHSGDPSLYSAVAEQCRR-LDVLGIDHEIVPGVPAFAAAAAAL
MLBr_02420|M.leprae_Br4923 GGADIRPALGDPTEVAKTLTAEARSGVDVVRLVAGDPLTVDAVIAEVNAV
* : .. . : .::: : * :*. : * * * . :
Mflv_0352|M.gilvum_PYR-GCK GRELTVPLVAQSVVLTRTRARSTQMPDTE-----------SLAAFAATRA
Mvan_0382|M.vanbaalenii_PYR-1 GRELTVPLVAQSVVLTRTRQRSTVMPDTE-----------SLKAFAATRA
MSMEG_3877|M.smegmatis_MC2_155 GRELTVPGVAQTVTLSRVATLSTAMPEGE-----------DLRTLSAPGA
TH_0443|M.thermoresistible__bu GRELTVPGVAQTVTLTRVATLSTAMPPGE-----------DLVTLSKPGA
Mb2097c|M.bovis_AF2122/97 KRELTVPGVAQTVTLTRVATLSTPMPPGE-----------DLAALARSRA
Rv2071c|M.tuberculosis_H37Rv KRELTVPGVAQTVTLTRVATLSTPIPPGE-----------DLAALARSRA
MMAR_3053|M.marinum_M KREFTVPGVSQTVTLTRISTLSTPMPPGE-----------DLAALAKPGA
MUL_2297|M.ulcerans_Agy99 KREFTVPGVSQTVTLTRISTLSTPMPPGE-----------DLAALAKPGA
MAV_2425|M.avium_104 KRELTVPGVAQTVTLSRVATLSTAMPPGE-----------DLATLARTGG
MAB_2196|M.abscessus_ATCC_1997 GTELTVPGVAQTVTITRVSTLSTAMPEGE-----------DLRTLAAPGA
MLBr_02420|M.leprae_Br4923 ARTNLQIEIVPGLVTSSVVPTYAGLPLGSSHTVADVRGDVDWEALAAAPG
: :. : : :* . . ::: . .
Mflv_0352|M.gilvum_PYR-GCK TLVLHLAITRIRELMAEIEG-DYGPDCPVVVVYRASQPQEIVLRGTVSDI
Mvan_0382|M.vanbaalenii_PYR-1 TLVLHLAITRIRELMAEIEP-EYGADCPVVVVYRASQPQELVLRGTVADI
MSMEG_3877|M.smegmatis_MC2_155 TLVLHLAAAQIDNIVPQLIEGGYRPETPCAVVAFASWPQEVVLRGTLADI
TH_0443|M.thermoresistible__bu TLVLHLAAAQIDAIVPKLLEGGYRPETPCAVVAFASWPEQTVLRGTLADI
Mb2097c|M.bovis_AF2122/97 TLVLHLAAAQIDAIVPRLLDGGYRPETPVAVVAFASWPQQRTLRGTLADI
Rv2071c|M.tuberculosis_H37Rv TLVLHLAAAQIDAIVPRLLDGGYRPETPVAVVAFASWPQQRTLRGTLADI
MMAR_3053|M.marinum_M TLVLHLAAAQIDAIVPQLLAGGYRPETPAAVVAFASWPQQAVLRGTLSDI
MUL_2297|M.ulcerans_Agy99 TLVLHLAAAQIDAIIPQLLAGGYRPETPAAVVAFASWPQQAVLRGTLSDI
MAV_2425|M.avium_104 TLVLQLAAAQIDSIVGQLLDNGRQSQTPCAVVAFASWPQETVLRGTLDDI
MAB_2196|M.abscessus_ATCC_1997 TLALHLAAAQIDTVAADLVAGGYPSDTPVAVVAYASWPSETILRGTLADI
MLBr_02420|M.leprae_Br4923 PLILQATASHLADAAHILIDHGLDDATPCVVTAQGTTCQQRSVETTLEGL
.* *: : ::: : * .*. .: .: :. *: .:
Mflv_0352|M.gilvum_PYR-GCK ADAVESAG------LRQAAVILVGRALAGRPDP-------EAGESYLYDA
Mvan_0382|M.vanbaalenii_PYR-1 ADAVQEAG------LRQAAVILVGRALAGRPDP-------DAGESYLYDP
MSMEG_3877|M.smegmatis_MC2_155 AEQMHAAD------VTRTAVIVVGDVLAAEG----------FTDSYLYSA
TH_0443|M.thermoresistible__bu AEQMRQAG------ITKTAVIIVGDVLAAEG----------FTDSYLYSA
Mb2097c|M.bovis_AF2122/97 AARMHDAK------ITRTAVIVVGDVLTAEG----------FTDSYLYSV
Rv2071c|M.tuberculosis_H37Rv AARMHDAK------ITRTAVIVVGDVLTAEG----------FTDSYLYSV
MMAR_3053|M.marinum_M AAQMHNAN------ITKTAVIVVGDVLAADG----------FTDSYLYSV
MUL_2297|M.ulcerans_Agy99 AAQMHNAN------ITKTAVIVVGDVLAADG----------FTDSYLYSV
MAV_2425|M.avium_104 AAQMHDAH------ITKTAVIIVGDALTAGG----------FTDSYLYST
MAB_2196|M.abscessus_ATCC_1997 AGQLKEAA------VTKTAVIFVGKVLAAEG----------FTDSYLYSS
MLBr_02420|M.leprae_Br4923 ADSAVLVGTDTAGPLTGPLVVTIGKTVTSRARLNWWESRALYGWTVLVPR
* . : . *: :* .::. : *
Mflv_0352|M.gilvum_PYR-GCK SRDRSGRDR-----------------------------------------
Mvan_0382|M.vanbaalenii_PYR-1 ARDRSGRSS-----------------------------------------
MSMEG_3877|M.smegmatis_MC2_155 TRRRGSRH------------------------------------------
TH_0443|M.thermoresistible__bu GRRRGSRH------------------------------------------
Mb2097c|M.bovis_AF2122/97 ARHGRYAQ------------------------------------------
Rv2071c|M.tuberculosis_H37Rv ARHGRYAQ------------------------------------------
MMAR_3053|M.marinum_M ARRGAH--------------------------------------------
MUL_2297|M.ulcerans_Agy99 ARRGAH--------------------------------------------
MAV_2425|M.avium_104 GRARGSRH------------------------------------------
MAB_2196|M.abscessus_ATCC_1997 GRRRGASH------------------------------------------
MLBr_02420|M.leprae_Br4923 TKDQAGEMSERLTSYGALPVEVPTIAVEPPRSPAQMERAVKGLVDGRFQW
:
Mflv_0352|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0382|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_3877|M.smegmatis_MC2_155 --------------------------------------------------
TH_0443|M.thermoresistible__bu --------------------------------------------------
Mb2097c|M.bovis_AF2122/97 --------------------------------------------------
Rv2071c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_3053|M.marinum_M --------------------------------------------------
MUL_2297|M.ulcerans_Agy99 --------------------------------------------------
MAV_2425|M.avium_104 --------------------------------------------------
MAB_2196|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_02420|M.leprae_Br4923 VVFTSTNAVRAVWEKFGEFGLDARAFSGVKIACVGEATADRVRAFGISPE
Mflv_0352|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0382|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_3877|M.smegmatis_MC2_155 --------------------------------------------------
TH_0443|M.thermoresistible__bu --------------------------------------------------
Mb2097c|M.bovis_AF2122/97 --------------------------------------------------
Rv2071c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_3053|M.marinum_M --------------------------------------------------
MUL_2297|M.ulcerans_Agy99 --------------------------------------------------
MAV_2425|M.avium_104 --------------------------------------------------
MAB_2196|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_02420|M.leprae_Br4923 LVPAGEQSSLGLLDEFPPYDSVFDPVNRVLLPRADIATETLAEGLRGCGW
Mflv_0352|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0382|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_3877|M.smegmatis_MC2_155 --------------------------------------------------
TH_0443|M.thermoresistible__bu --------------------------------------------------
Mb2097c|M.bovis_AF2122/97 --------------------------------------------------
Rv2071c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_3053|M.marinum_M --------------------------------------------------
MUL_2297|M.ulcerans_Agy99 --------------------------------------------------
MAV_2425|M.avium_104 --------------------------------------------------
MAB_2196|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_02420|M.leprae_Br4923 EIEDVTAYRTVRAAPPPAATREMIKTGGFDAVCFTSSSTVRNLVGIAGKP
Mflv_0352|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0382|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_3877|M.smegmatis_MC2_155 --------------------------------------------------
TH_0443|M.thermoresistible__bu --------------------------------------------------
Mb2097c|M.bovis_AF2122/97 --------------------------------------------------
Rv2071c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_3053|M.marinum_M --------------------------------------------------
MUL_2297|M.ulcerans_Agy99 --------------------------------------------------
MAV_2425|M.avium_104 --------------------------------------------------
MAB_2196|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_02420|M.leprae_Br4923 HARTVIACIGPKTAETASEFGLRVDVQPETAAVGPLVDALAEHVARLRAE
Mflv_0352|M.gilvum_PYR-GCK -------------
Mvan_0382|M.vanbaalenii_PYR-1 -------------
MSMEG_3877|M.smegmatis_MC2_155 -------------
TH_0443|M.thermoresistible__bu -------------
Mb2097c|M.bovis_AF2122/97 -------------
Rv2071c|M.tuberculosis_H37Rv -------------
MMAR_3053|M.marinum_M -------------
MUL_2297|M.ulcerans_Agy99 -------------
MAV_2425|M.avium_104 -------------
MAB_2196|M.abscessus_ATCC_1997 -------------
MLBr_02420|M.leprae_Br4923 GALPPPRKKSRRR