For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTVYFIGAGPGAADLITVRGQRLLQRCPVCLYAGSIMPDDLLAQCPPGATIVDTGPLTLEQIVRKLADAD ADGRDVARLHSGDPSLYSALAEQCRELDALGIGYEIVPGVPAFAAAAAALKRELTVPGVAQTVTLTRVAT LSTPMPPGEDLAALARSRATLVLHLAAAQIDAIVPRLLDGGYRPETPVAVVAFASWPQQRTLRGTLADIA ARMHDAKITRTAVIVVGDVLTAEGFTDSYLYSVARHGRYAQ
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2097c | cobM | - | 100% (251) | precorrin-4 C11-methyltransferase CobM |
M. bovis AF2122 / 97 | Mb2872c | cysG | 1e-24 | 34.16% (243) | multifunctional uroporphyrinogen III methylase/precorrin-2 |
M. bovis AF2122 / 97 | Mb0524 | hemD | 1e-08 | 25.10% (243) | uroporphyrin-III C-methyltransferase HemD |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0352 | - | 2e-60 | 51.63% (246) | precorrin-4 C11-methyltransferase |
M. tuberculosis H37Rv | Rv2071c | cobM | 1e-140 | 99.60% (251) | precorrin-4 C11-methyltransferase CobM |
M. leprae Br4923 | MLBr_02420 | hemD | 4e-08 | 24.29% (247) | putative uroporphyrin-III C-methyltransferase |
M. abscessus ATCC 19977 | MAB_2196 | - | 1e-102 | 74.69% (245) | precorrin-4 C11-methyltransferase CobM |
M. marinum M | MMAR_3053 | cobM | 1e-119 | 85.54% (249) | precorrin-4 C11-methyltransferase, CobM |
M. avium 104 | MAV_2425 | cobM | 1e-110 | 82.04% (245) | precorrin-4 C11-methyltransferase |
M. smegmatis MC2 155 | MSMEG_3877 | cobM | 1e-109 | 80.82% (245) | precorrin-4 C11-methyltransferase |
M. thermoresistible (build 8) | TH_0443 | cobM | 1e-114 | 84.49% (245) | Probable precorrin-4 C11-methyltransferase CobM |
M. ulcerans Agy99 | MUL_2297 | cobM | 1e-118 | 84.74% (249) | precorrin-4 C11-methyltransferase, CobM |
M. vanbaalenii PYR-1 | Mvan_0382 | - | 2e-56 | 50.81% (246) | uroporphyrin-III C/tetrapyrrole methyltransferase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0352|M.gilvum_PYR-GCK ------------MN-HPVQFVGAGPGAADLLTVRAARLLADAGLVLYPGT Mvan_0382|M.vanbaalenii_PYR-1 ------------MNDRAVQFVGAGPGAADLLTVRAARFLADAELVLYPGT Mb2097c|M.bovis_AF2122/97 ---------------MTVYFIGAGPGAADLITVRGQRLLQRCPVCLYAGS Rv2071c|M.tuberculosis_H37Rv ---------------MTVYFIGAGPGAADLITVRGQRLLQRCPVCLYAGS MMAR_3053|M.marinum_M ---------------MTVYFIGAGPGAADLITLRGQRLLQSCPVCLYAGS MUL_2297|M.ulcerans_Agy99 ---------------MTVYFIGAGPGAADLITLRGQRLLQSCPVCLYAGS MAV_2425|M.avium_104 ---------------MTVYFIGAGPGAADLITVRGQRLLQSCPVCLYAGS MSMEG_3877|M.smegmatis_MC2_155 ---------------MTVYFIGAGPGAADLITVRGQRLLGTCKVCLYAGS TH_0443|M.thermoresistible__bu ---------VVGDETMTVYFIGAGPGAADLITVRGQRLLSRCPVCLYAGS MAB_2196|M.abscessus_ATCC_1997 MEISSARSSVEHRKIMTVYFIGAGPGAADLITVRGQRILRQCSVCLYAGS MLBr_02420|M.leprae_Br4923 MVGATMTTRGRKLRPGRITFVGAGPGAPGLLTAQAVAVLANAALVFIDPD : *:******..*:* :. .* . : : Mflv_0352|M.gilvum_PYR-GCK YLD----------PDVLAHCSPSADLVDTGNLDLDTIVARLVDGH----R Mvan_0382|M.vanbaalenii_PYR-1 YLD----------AAVLAHCSPDADLVDTENLDLDTIVARLVDGH----R Mb2097c|M.bovis_AF2122/97 IMP----------DDLLAQCPPGATIVDTGPLTLEQIVRKLADAD----A Rv2071c|M.tuberculosis_H37Rv IMP----------DDLLAQCPPGATIVDTGPLTLEQIVRKLADAD----A MMAR_3053|M.marinum_M IMP----------DDLLAYCPPEAKVVDTGPLTLEQIITELAAAH----A MUL_2297|M.ulcerans_Agy99 IMP----------DDLLAYCPVEAKVVDTGPLTLEQIITELAAAH----A MAV_2425|M.avium_104 IMP----------DDLLALCPPDARIVDTGPLTLDQIITELSQAH----A MSMEG_3877|M.smegmatis_MC2_155 IMP----------DDLLALCPPDAKVIDTGPLNLDQIIDELVAAD----E TH_0443|M.thermoresistible__bu IMP----------DDLLALCPPDARIVDTGPLTLDQIVAELADAH----A MAB_2196|M.abscessus_ATCC_1997 IMP----------DDLLAECPPGARVVDTGPLTLDAIIEEISAAD----A MLBr_02420|M.leprae_Br4923 VPEPVLALIGKDLPPVSGPAPAGPAAVTAGRAADGTLEGDHYQAAPMVMS : . .. . : : : . Mflv_0352|M.gilvum_PYR-GCK GGVAVVRLVSGDPSVYSAVSEQTRR-LDAAGVPWQVTPGVPAYAAAAARV Mvan_0382|M.vanbaalenii_PYR-1 AGLRVVRLVSGDPSVYSALSEQTRR-LDAVRVPWEVTPGVPAYAAAAARV Mb2097c|M.bovis_AF2122/97 DGRDVARLHSGDPSLYSALAEQCRE-LDALGIGYEIVPGVPAFAAAAAAL Rv2071c|M.tuberculosis_H37Rv DGRDVARLHSGDPSLYSALAEQCRE-LDALGIGYEIVPGVPAFAAAAAAL MMAR_3053|M.marinum_M AGHDVARLHSGDPSLYSALAEQCRR-LDALGIGYEIVPGVPAFAAAAAAL MUL_2297|M.ulcerans_Agy99 AGHDVARLHSGDPSLYSALAEQCRR-LDALGIGYEIVPGVPAFAAAAAAL MAV_2425|M.avium_104 AGHDVARLHSGDPSLYSALAEQCRR-LDALGIDYEIVPGVPAFAAAAAAL MSMEG_3877|M.smegmatis_MC2_155 AGLDVARLHSGDPSIYSALAEQCRR-LDALGIGYEIVPGVPAFAAVAAAL TH_0443|M.thermoresistible__bu RGLDVARLHSGDPAIYSALAEQCRR-LDALGIDYEIVPGVPAFAAAAAAL MAB_2196|M.abscessus_ATCC_1997 EGLDVARLHSGDPSLYSAVAEQCRR-LDVLGIDHEIVPGVPAFAAAAAAL MLBr_02420|M.leprae_Br4923 GGADIRPALGDPTEVAKTLTAEARSGVDVVRLVAGDPLTVDAVIAEVNAV * : .. . : .::: : * :*. : * * * . : Mflv_0352|M.gilvum_PYR-GCK GRELTVPLVAQSVVLTRTRARSTQMPDTE-----------SLAAFAATRA Mvan_0382|M.vanbaalenii_PYR-1 GRELTVPLVAQSVVLTRTRQRSTVMPDTE-----------SLKAFAATRA Mb2097c|M.bovis_AF2122/97 KRELTVPGVAQTVTLTRVATLSTPMPPGE-----------DLAALARSRA Rv2071c|M.tuberculosis_H37Rv KRELTVPGVAQTVTLTRVATLSTPIPPGE-----------DLAALARSRA MMAR_3053|M.marinum_M KREFTVPGVSQTVTLTRISTLSTPMPPGE-----------DLAALAKPGA MUL_2297|M.ulcerans_Agy99 KREFTVPGVSQTVTLTRISTLSTPMPPGE-----------DLAALAKPGA MAV_2425|M.avium_104 KRELTVPGVAQTVTLSRVATLSTAMPPGE-----------DLATLARTGG MSMEG_3877|M.smegmatis_MC2_155 GRELTVPGVAQTVTLSRVATLSTAMPEGE-----------DLRTLSAPGA TH_0443|M.thermoresistible__bu GRELTVPGVAQTVTLTRVATLSTAMPPGE-----------DLVTLSKPGA MAB_2196|M.abscessus_ATCC_1997 GTELTVPGVAQTVTITRVSTLSTAMPEGE-----------DLRTLAAPGA MLBr_02420|M.leprae_Br4923 ARTNLQIEIVPGLVTSSVVPTYAGLPLGSSHTVADVRGDVDWEALAAAPG : :. : : :* . . ::: . . Mflv_0352|M.gilvum_PYR-GCK TLVLHLAITRIRELMAEIEG-DYGPDCPVVVVYRASQPQEIVLRGTVSDI Mvan_0382|M.vanbaalenii_PYR-1 TLVLHLAITRIRELMAEIEP-EYGADCPVVVVYRASQPQELVLRGTVADI Mb2097c|M.bovis_AF2122/97 TLVLHLAAAQIDAIVPRLLDGGYRPETPVAVVAFASWPQQRTLRGTLADI Rv2071c|M.tuberculosis_H37Rv TLVLHLAAAQIDAIVPRLLDGGYRPETPVAVVAFASWPQQRTLRGTLADI MMAR_3053|M.marinum_M TLVLHLAAAQIDAIVPQLLAGGYRPETPAAVVAFASWPQQAVLRGTLSDI MUL_2297|M.ulcerans_Agy99 TLVLHLAAAQIDAIIPQLLAGGYRPETPAAVVAFASWPQQAVLRGTLSDI MAV_2425|M.avium_104 TLVLQLAAAQIDSIVGQLLDNGRQSQTPCAVVAFASWPQETVLRGTLDDI MSMEG_3877|M.smegmatis_MC2_155 TLVLHLAAAQIDNIVPQLIEGGYRPETPCAVVAFASWPQEVVLRGTLADI TH_0443|M.thermoresistible__bu TLVLHLAAAQIDAIVPKLLEGGYRPETPCAVVAFASWPEQTVLRGTLADI MAB_2196|M.abscessus_ATCC_1997 TLALHLAAAQIDTVAADLVAGGYPSDTPVAVVAYASWPSETILRGTLADI MLBr_02420|M.leprae_Br4923 PLILQATASHLADAAHILIDHGLDDATPCVVTAQGTTCQQRSVETTLEGL .* *: : ::: : * .*. .: .: :. *: .: Mflv_0352|M.gilvum_PYR-GCK ADAVESAG------LRQAAVILVGRALAGRPDP-------EAGESYLYDA Mvan_0382|M.vanbaalenii_PYR-1 ADAVQEAG------LRQAAVILVGRALAGRPDP-------DAGESYLYDP Mb2097c|M.bovis_AF2122/97 AARMHDAK------ITRTAVIVVGDVLTAEG----------FTDSYLYSV Rv2071c|M.tuberculosis_H37Rv AARMHDAK------ITRTAVIVVGDVLTAEG----------FTDSYLYSV MMAR_3053|M.marinum_M AAQMHNAN------ITKTAVIVVGDVLAADG----------FTDSYLYSV MUL_2297|M.ulcerans_Agy99 AAQMHNAN------ITKTAVIVVGDVLAADG----------FTDSYLYSV MAV_2425|M.avium_104 AAQMHDAH------ITKTAVIIVGDALTAGG----------FTDSYLYST MSMEG_3877|M.smegmatis_MC2_155 AEQMHAAD------VTRTAVIVVGDVLAAEG----------FTDSYLYSA TH_0443|M.thermoresistible__bu AEQMRQAG------ITKTAVIIVGDVLAAEG----------FTDSYLYSA MAB_2196|M.abscessus_ATCC_1997 AGQLKEAA------VTKTAVIFVGKVLAAEG----------FTDSYLYSS MLBr_02420|M.leprae_Br4923 ADSAVLVGTDTAGPLTGPLVVTIGKTVTSRARLNWWESRALYGWTVLVPR * . : . *: :* .::. : * Mflv_0352|M.gilvum_PYR-GCK SRDRSGRDR----------------------------------------- Mvan_0382|M.vanbaalenii_PYR-1 ARDRSGRSS----------------------------------------- Mb2097c|M.bovis_AF2122/97 ARHGRYAQ------------------------------------------ Rv2071c|M.tuberculosis_H37Rv ARHGRYAQ------------------------------------------ MMAR_3053|M.marinum_M ARRGAH-------------------------------------------- MUL_2297|M.ulcerans_Agy99 ARRGAH-------------------------------------------- MAV_2425|M.avium_104 GRARGSRH------------------------------------------ MSMEG_3877|M.smegmatis_MC2_155 TRRRGSRH------------------------------------------ TH_0443|M.thermoresistible__bu GRRRGSRH------------------------------------------ MAB_2196|M.abscessus_ATCC_1997 GRRRGASH------------------------------------------ MLBr_02420|M.leprae_Br4923 TKDQAGEMSERLTSYGALPVEVPTIAVEPPRSPAQMERAVKGLVDGRFQW : Mflv_0352|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0382|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb2097c|M.bovis_AF2122/97 -------------------------------------------------- Rv2071c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_3053|M.marinum_M -------------------------------------------------- MUL_2297|M.ulcerans_Agy99 -------------------------------------------------- MAV_2425|M.avium_104 -------------------------------------------------- MSMEG_3877|M.smegmatis_MC2_155 -------------------------------------------------- TH_0443|M.thermoresistible__bu -------------------------------------------------- MAB_2196|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_02420|M.leprae_Br4923 VVFTSTNAVRAVWEKFGEFGLDARAFSGVKIACVGEATADRVRAFGISPE Mflv_0352|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0382|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb2097c|M.bovis_AF2122/97 -------------------------------------------------- Rv2071c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_3053|M.marinum_M -------------------------------------------------- MUL_2297|M.ulcerans_Agy99 -------------------------------------------------- MAV_2425|M.avium_104 -------------------------------------------------- MSMEG_3877|M.smegmatis_MC2_155 -------------------------------------------------- TH_0443|M.thermoresistible__bu -------------------------------------------------- MAB_2196|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_02420|M.leprae_Br4923 LVPAGEQSSLGLLDEFPPYDSVFDPVNRVLLPRADIATETLAEGLRGCGW Mflv_0352|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0382|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb2097c|M.bovis_AF2122/97 -------------------------------------------------- Rv2071c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_3053|M.marinum_M -------------------------------------------------- MUL_2297|M.ulcerans_Agy99 -------------------------------------------------- MAV_2425|M.avium_104 -------------------------------------------------- MSMEG_3877|M.smegmatis_MC2_155 -------------------------------------------------- TH_0443|M.thermoresistible__bu -------------------------------------------------- MAB_2196|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_02420|M.leprae_Br4923 EIEDVTAYRTVRAAPPPAATREMIKTGGFDAVCFTSSSTVRNLVGIAGKP Mflv_0352|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0382|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb2097c|M.bovis_AF2122/97 -------------------------------------------------- Rv2071c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_3053|M.marinum_M -------------------------------------------------- MUL_2297|M.ulcerans_Agy99 -------------------------------------------------- MAV_2425|M.avium_104 -------------------------------------------------- MSMEG_3877|M.smegmatis_MC2_155 -------------------------------------------------- TH_0443|M.thermoresistible__bu -------------------------------------------------- MAB_2196|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_02420|M.leprae_Br4923 HARTVIACIGPKTAETASEFGLRVDVQPETAAVGPLVDALAEHVARLRAE Mflv_0352|M.gilvum_PYR-GCK ------------- Mvan_0382|M.vanbaalenii_PYR-1 ------------- Mb2097c|M.bovis_AF2122/97 ------------- Rv2071c|M.tuberculosis_H37Rv ------------- MMAR_3053|M.marinum_M ------------- MUL_2297|M.ulcerans_Agy99 ------------- MAV_2425|M.avium_104 ------------- MSMEG_3877|M.smegmatis_MC2_155 ------------- TH_0443|M.thermoresistible__bu ------------- MAB_2196|M.abscessus_ATCC_1997 ------------- MLBr_02420|M.leprae_Br4923 GALPPPRKKSRRR