For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. bovis AF2122 / 97 Mb3422 (lpqD)

annotation: lipoprotein LpqD
coordinates: 3757202 - 3757912
length: 236

MAKRTPVRKACTVLAVLAATLLLGACGGPTQPRSITLTFIRNAQSQANADGIIDTDMPGSGLSADGKAEA
QQVAHQVSRRDVDSIYSSPMAADQQTAGPLAGELGKQVEILPGLQAINAGWFNGKPESMANSTYMLAPAD
WLAGDVHNTIPGSISGTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAIMIWTLMNARNSRDSLLTTHPLPN
IGRVVITGNPVTGWRLVEWDGIRNFT
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3422lpqD-100% (236)lipoprotein LpqD
M. bovis AF2122 / 97Mb0776PE_PGRS115e-3839.82% (226) PE-PGRS family protein
M. bovis AF2122 / 97Mb3867c-1e-0826.34% (205) phosphoglycerate mutase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_4577-2e-3838.74% (222) phosphoglycerate mutase
M. tuberculosis H37RvRv3390lpqD1e-135100.00% (236) lipoprotein LpqD
M. leprae Br4923MLBr_00079-1e-0725.00% (208) putative phosphoglycerate mutase
M. abscessus ATCC 19977MAB_0133-3e-1026.37% (201) phosphoglycerate mutase
M. marinum MMMAR_1154lpqD3e-9269.64% (224) lipoprotein, LpqD
M. avium 104MAV_4339-1e-9168.47% (222) phosphoglycerate mutase family protein
M. smegmatis MC2 155MSMEG_6545-3e-5046.32% (231) phosphoglycerate mutase family protein
M. thermoresistible (build 8)TH_2144-4e-4847.06% (204) phosphoglycerate mutase family protein
M. ulcerans Agy99MUL_0919lpqD3e-9266.53% (236) lipoprotein, LpqD
M. vanbaalenii PYR-1Mvan_5262-7e-4543.35% (233) phosphoglycerate mutase

CLUSTAL 2.0.9 multiple sequence alignment


Mb3422|M.bovis_AF2122/97            MAKRTPVRKACTVLAVLAATLLLGACGG--PTQPRSITLTFIRNAQSQAN
Rv3390|M.tuberculosis_H37Rv         MAKRTPVRKACTVLAVLAATLLLGACGG--PTQPRSITLTFIRNAQSQAN
MMAR_1154|M.marinum_M               -----MIWNTSKVLALLATAMLLGACGGG-SPQARSITLTFIRNAQSQAD
MUL_0919|M.ulcerans_Agy99           MAKRSMIWNTSKVLALLATAMLPGACGGG-SPQARSITLTFIRNAQSQAD
MAV_4339|M.avium_104                -----------MALAALIATVTVAACGG--SPQARSITVTFVRHAQSEAN
MSMEG_6545|M.smegmatis_MC2_155      -MTTHTRRTA--AVAALVVALVAGMLTAPNAVAQRIITLTLVRHAQSEGN
TH_2144|M.thermoresistible__bu      ------VLLL--ACALAAPAGIPGSVPTARAAGPAVMTLTLVRHAESMGN
Mflv_4577|M.gilvum_PYR-GCK          --MPDPRTCR--VRRILIAALSAVLLVLVSAIPSWAMTLTFVRHAESLAN
Mvan_5262|M.vanbaalenii_PYR-1       --MRDVRRTARRLLTILAATLAAAVLFAASAFAAADIVLTFVRHGQSQAN
MLBr_00079|M.leprae_Br4923          ----------------------------------MSSRLVLLRHGQSYGN
MAB_0133|M.abscessus_ATCC_1997      -----------------------MARRDAGREAAMSGRLVLVRHGQSYGN
                                                                          :.::*:.:* .:

Mb3422|M.bovis_AF2122/97            ADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRD-VDSIYSSPMAADQQTA
Rv3390|M.tuberculosis_H37Rv         ADGIIDTDMPGSGLSADGKAEAQQVAHQVSRRD-VDSIYSSPMAADQQTA
MMAR_1154|M.marinum_M               AEGIIATELPGTGLSSDGKDQAQQLTHQFGRSE-FDSIYTSPMEAAQQTA
MUL_0919|M.ulcerans_Agy99           AEGIIATELPGTGLSSDGKDQAQQLTHQFGRSE-FDSIYTSPMEAAQQTA
MAV_4339|M.avium_104                ASGTIDTEVPGPGLSPEGKGQAEQVAHQLGRKD-YDSVYASTMTRAQQTA
MSMEG_6545|M.smegmatis_MC2_155      ASGLIDTSTPGPPLTALGREQAETAAQKLAAGHTFDGIYASTMIRTQQTA
TH_2144|M.thermoresistible__bu      ASGVIDSSTPGPPLSPLGWVQAQVVAAELAGGG-HDGLYASTMIRTQQTA
Mflv_4577|M.gilvum_PYR-GCK          EAGIIDTRVPGPGLSEAGELQARAIAPVLAGMG-FDGIYVSSMLRTQLTA
Mvan_5262|M.vanbaalenii_PYR-1       ADGIINTEVPGPHITALGQQQAALVAGVLAAGG-YQGIYASDMVRTQETA
MLBr_00079|M.leprae_Br4923          VEGRLDTRPPGASLTPFGRDQARVFAQ--AAGRPVLLVHS-VAIRALETA
MAB_0133|M.abscessus_ATCC_1997      VERRLDTKPPGAALTELGLQQARLFAKRYEEHAPAVLVHS-VAVRAVQTA
                                        : :  **. ::  *  :*   :           ::         **

Mb3422|M.bovis_AF2122/97            GPLAGEL-GKQVEILPGLQAINAGWFNGKPE--SMANST--YMLAPADWL
Rv3390|M.tuberculosis_H37Rv         GPLAGEL-GKQVEILPGLQAINAGWFNGKPE--SMANST--YMLAPADWL
MMAR_1154|M.marinum_M               APLAGEL-SKQAEIVPGLQSIDAGWYNGKPD--SMADRT--YMVAPVSWI
MUL_0919|M.ulcerans_Agy99           APLARQL-SKQAEIVPGLQSIDAGWYNGKPD--SMADRT--YMVAPVSWI
MAV_4339|M.avium_104                APLAAEL-GKQVEVLPGIQEINAGWYNGKPE--SMAKST--YLVAPANWL
MSMEG_6545|M.smegmatis_MC2_155      QPLADLS-REPVTVLPGLREIEAGIYEGQPE-ALAG-FT--YYEAPTRWL
TH_2144|M.thermoresistible__bu      EPLANLT-GEPVVVLPGLREIEAGVFEGQPE-ASAGDYSGGYFTAPARWL
Mflv_4577|M.gilvum_PYR-GCK          QPMLDLLPGSSYQVLPGLREISAGIFEGSSENEGLGRLG--YALAPVTWM
Mvan_5262|M.vanbaalenii_PYR-1       APLADIL-GESVTVLPGLREIDAGIYEGSSETDGLGRLG--YGLTPALWT
MLBr_00079|M.leprae_Br4923          AVLGAEF-DVPIREIAGIHEVQVGELENRNDDDAIAEFN----AIYDRWH
MAB_0133|M.abscessus_ATCC_1997      AGIAEHL-GVQAEQIEGLHEVQAGELEDRTDLEAFAVFD----RTYERWH
                                      :           : *:: :..*  :.  :    .            * 

Mb3422|M.bovis_AF2122/97            AGDVHNTIPGSIS-----GTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAI
Rv3390|M.tuberculosis_H37Rv         AGDVHNTIPGSIS-----GTEFNSQFSAAVRKIYDSGHNTPVVFSQGVAI
MMAR_1154|M.marinum_M               DGNVEASIPGSTS-----GSDFNSRFTGAIRKIYDGGHNKPVVFSQGTAI
MUL_0919|M.ulcerans_Agy99           DGNVEASIPGSTS-----GSDFNSRFTGAIRKIYDGGHNRPVVFSQGTAI
MAV_4339|M.avium_104                KGDVSDSIPGSIS-----GKEFNDQFTAAVNKIYNSGHRNPVVFSHANSI
MSMEG_6545|M.smegmatis_MC2_155      QGDRTARIPGSID-----GDEFDARFDEAVREIYDSEDTDPVAFSHAGAI
TH_2144|M.thermoresistible__bu      RGDRSARIPGSID-----GNEFDARFDEAVQQIHADGAVNPVAFAHAASI
Mflv_4577|M.gilvum_PYR-GCK          LGARFVPVPGGED-----GNAFDARVDGAIAEIADNGDENAVAFAHGATI
Mvan_5262|M.vanbaalenii_PYR-1       LGLRSAWIPDSTDT---NGNVFSDRMSEAVQIIYEDGWARPVAFSHGATI
MLBr_00079|M.leprae_Br4923          HGELDVPLPGGETANDVLDRYLPVLVDLRMRYLDDGDWTGDVVVVSHGAA
MAB_0133|M.abscessus_ATCC_1997      FGDLDARMPGGESAQDVFDRYLPAVADLRLRHLENDASTGDVVIVSHGAA
                                     *     :*..       .  :       :  :  .     *..    : 

Mb3422|M.bovis_AF2122/97            MIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT-
Rv3390|M.tuberculosis_H37Rv         MIWTLMNARNSRDSLLTTHPLPNIGRVVITGNPVTGWRLVEWDGIRNFT-
MMAR_1154|M.marinum_M               MVWTLMNVKNPKTNLLNTHPLPNIGRVVISGNPATGWKLVDWDGIRNFG-
MUL_0919|M.ulcerans_Agy99           MVWTLMNVKNPKTNLLNTHPLPNIGRVVISGNPATGWKLVDWDGIRNFG-
MAV_4339|M.avium_104                MVWTLMNTRNAKDSLMNTHPLPNTGRVVINGNPITGWTLVDWDGIRDFRS
MSMEG_6545|M.smegmatis_MC2_155      MTWVAMNVDNPDLGLLSRHPLGNTGHAVVKGNPTGGWTLVDWGGINTE--
TH_2144|M.thermoresistible__bu      MVWVMMNVDNPDPDLLLQRPLRNTGRVVLTGSPGQGWTLVDWDGIPVRHR
Mflv_4577|M.gilvum_PYR-GCK          MFWVMMNVDNPDLLLMLRHQLDNVESVVVEGSPEEGWTLVSWAGQAVSAD
Mvan_5262|M.vanbaalenii_PYR-1       MFWTMMNVDNPDLGLLLSHQLPNTGVVVLEGNPEDGWTLVSWDGVAVDPD
MLBr_00079|M.leprae_Br4923          IRLVSAVLAEVDGRFALENRVNNAESVVLVPVTDGRWSCVRWGALTPPFY
MAB_0133|M.abscessus_ATCC_1997      IRLVAAALAGVDPGFAVNRHLRNAEAVVLAPVTDGRWSCVHWGDAVAPF-
                                    :  .          :   . : *   .*:   .   *  * *        

Mb3422|M.bovis_AF2122/97            --------------------------------------------------
Rv3390|M.tuberculosis_H37Rv         --------------------------------------------------
MMAR_1154|M.marinum_M               --------------------------------------------------
MUL_0919|M.ulcerans_Agy99           --------------------------------------------------
MAV_4339|M.avium_104                --------------------------------------------------
MSMEG_6545|M.smegmatis_MC2_155      --------------------------------------------------
TH_2144|M.thermoresistible__bu      P-------------------------------------------------
Mflv_4577|M.gilvum_PYR-GCK          PSLATKLLVNVRDLVVAPQTALYNVGTAFSSGDFETLVNAVRDGLIEVTR
Mvan_5262|M.vanbaalenii_PYR-1       PSFLTKTFVNVRELITTPQTAVYNVKKAFATGDLAAITDSFAQAVIDVVL
MLBr_00079|M.leprae_Br4923          PHLHRPDSTLVTDVVMSGRDSLG---------------------------
MAB_0133|M.abscessus_ATCC_1997      PHQEAAS----AEELAQSADPMG---------------------------
                                                                                      

Mb3422|M.bovis_AF2122/97            --------------------------------------------------
Rv3390|M.tuberculosis_H37Rv         --------------------------------------------------
MMAR_1154|M.marinum_M               --------------------------------------------------
MUL_0919|M.ulcerans_Agy99           --------------------------------------------------
MAV_4339|M.avium_104                --------------------------------------------------
MSMEG_6545|M.smegmatis_MC2_155      --------------------------------------------------
TH_2144|M.thermoresistible__bu      --------------------------------------------------
Mflv_4577|M.gilvum_PYR-GCK          AVVRFIPDTVRDIVDEFRPSVTEDSLDVTELHRAVVTAAPQDDDEAEPQS
Mvan_5262|M.vanbaalenii_PYR-1       APVRFVGAVATDVLELVFPPAPSVQVEAP---MSAESTTDESDVPADVPD
MLBr_00079|M.leprae_Br4923          --------------------------------------------------
MAB_0133|M.abscessus_ATCC_1997      --------------------------------------------------
                                                                                      

Mb3422|M.bovis_AF2122/97            --------------------------------------------------
Rv3390|M.tuberculosis_H37Rv         --------------------------------------------------
MMAR_1154|M.marinum_M               --------------------------------------------------
MUL_0919|M.ulcerans_Agy99           --------------------------------------------------
MAV_4339|M.avium_104                --------------------------------------------------
MSMEG_6545|M.smegmatis_MC2_155      --------------------------------------------------
TH_2144|M.thermoresistible__bu      --------------------------------------------------
Mflv_4577|M.gilvum_PYR-GCK          VAVAEAETRNGSGVAPAGSTPPSGDEVTGSTDDDEATASDVVLEDTVDVD
Mvan_5262|M.vanbaalenii_PYR-1       DVVAVAPSEDVESRTPEPASDEAETREESAAPESEATEPEISASQSEESE
MLBr_00079|M.leprae_Br4923          --------------------------------------------------
MAB_0133|M.abscessus_ATCC_1997      --------------------------------------------------
                                                                                      

Mb3422|M.bovis_AF2122/97            --------------------------------------------------
Rv3390|M.tuberculosis_H37Rv         --------------------------------------------------
MMAR_1154|M.marinum_M               --------------------------------------------------
MUL_0919|M.ulcerans_Agy99           --------------------------------------------------
MAV_4339|M.avium_104                --------------------------------------------------
MSMEG_6545|M.smegmatis_MC2_155      --------------------------------------------------
TH_2144|M.thermoresistible__bu      --------------------------------------------------
Mflv_4577|M.gilvum_PYR-GCK          TIDVDTVEEDTGASDHAVGNHPDAEADDAAPANGSAKSSDDDGDSDDDAS
Mvan_5262|M.vanbaalenii_PYR-1       -VETETTEETTTAG---------------------TTGDDDTDETDDGAA
MLBr_00079|M.leprae_Br4923          --------------------------------------------------
MAB_0133|M.abscessus_ATCC_1997      --------------------------------------------------
                                                                                      

Mb3422|M.bovis_AF2122/97            -----
Rv3390|M.tuberculosis_H37Rv         -----
MMAR_1154|M.marinum_M               -----
MUL_0919|M.ulcerans_Agy99           -----
MAV_4339|M.avium_104                -----
MSMEG_6545|M.smegmatis_MC2_155      -----
TH_2144|M.thermoresistible__bu      -----
Mflv_4577|M.gilvum_PYR-GCK          ERAAA
Mvan_5262|M.vanbaalenii_PYR-1       VKEAA
MLBr_00079|M.leprae_Br4923          -----
MAB_0133|M.abscessus_ATCC_1997      -----