For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VNYSEVELLSRAHQLFAGDSRRPGLDAGTTPYGDLLSRAADLNVGAGQRRYQLAVDHSRAALLSAARTDA AAGAVITGAQRDRAWARRSTGTVLDEARSDTTVTAVMPIAQREAIRRRVARLRAQRAHVLTARRRARRHL AALRALRYRVAHGPGVALAKLRLPSPSGRAGIAVHAALSRLGRPYVWGATGPTSSTVPVWSSGPTPRRVF TWIAPPINRSTRGSRCRAHRSGRAIWSSRTPGTCSWRSATIWSSRRPMRARRFGSARWATTCRFGDR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0024 | - | - | 100% (277) | hypothetical protein Mb0024 |
M. bovis AF2122 / 97 | Mb3926c | - | 3e-17 | 31.46% (267) | hypothetical protein Mb3926c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0888 | - | 2e-06 | 27.68% (177) | NLP/P60 protein |
M. tuberculosis H37Rv | Rv0024 | - | 1e-104 | 100.00% (192) | putative secreted protein P60-related protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_0043 | - | 6e-48 | 57.59% (191) | secreted protein P60-related protein |
M. avium 104 | MAV_0042 | - | 5e-53 | 59.38% (192) | NLP/P60 family protein |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_0042 | - | 8e-47 | 56.02% (191) | secreted protein P60-related protein |
M. vanbaalenii PYR-1 | Mvan_3713 | - | 6e-06 | 27.44% (215) | NLP/P60 protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb0024|M.bovis_AF2122/97 -----------------------------------------MNYSEVELL Rv0024|M.tuberculosis_H37Rv -----------------------------------------MNYSEVELL MMAR_0043|M.marinum_M -----------------------------------------MIPTEVDAL MUL_0042|M.ulcerans_Agy99 -----------------------------------------MIPTEVDAL MAV_0042|M.avium_104 -----------------------------------------MSHSELEAL Mflv_0888|M.gilvum_PYR-GCK MNSLALCHRFRVIARRALCALLGASLLFAFVAIDVGADPAADALAELTEQ Mvan_3713|M.vanbaalenii_PYR-1 -------------MAIVLALTLGNSAGIG------WADPAADALARLTEL :.: Mb0024|M.bovis_AF2122/97 SRAHQLFAGDSRRPGLDAGTTPYGDLLS-------RAADLNVGAGQRRYQ Rv0024|M.tuberculosis_H37Rv SRAHQLFAGDSRRPGLDAGTTPYGDLLS-------RAADLNVGAGQRRYQ MMAR_0043|M.marinum_M LRAHQMFVGTGDHRMPDVRPQPGAEPLR-------RATLPNPATDQPRYG MUL_0042|M.ulcerans_Agy99 LRAHQMFVGTGDHRMPDVHPQPGAEPLW-------RATPPNPATDQPRYR MAV_0042|M.avium_104 SRAHQLFAGGTRPASLDTGSGHYRDLLG-------RAARLSDGFAHGGYR Mflv_0888|M.gilvum_PYR-GCK SRLAEQTTEQIHTAQIDLDERLAAQQVAEKKAASDRVRVDAASADLAKYQ Mvan_3713|M.vanbaalenii_PYR-1 SREAEQTTEAVYSAELDLEAKLAAQRRAEDRQRAELEAMTAARADLGEYQ * : . * : * Mb0024|M.bovis_AF2122/97 LAVDHSRAALLSAARTDAAAGAVITGAQR--------DRAWARRSTGTVL Rv0024|M.tuberculosis_H37Rv LAVDHSRAALLSAARTDAAAGAVITGAQR--------DRAWARRSTGTVL MMAR_0043|M.marinum_M FRAARGREVLAAATRTDAAVAAVIADAHR--------DREQARELTGNVV MUL_0042|M.ulcerans_Agy99 FRAARGREVLAAATRTDAVVAAVIADAHR--------DREQARELTGNVV MAV_0042|M.avium_104 LAVQHSRQRLASTSDTDAAVTDLLAGAHR--------DRAQARELTGAVL Mflv_0888|M.gilvum_PYR-GCK AAVDKLAAAAYMGGRTDTLAAALTATSPQELIDQLAIQKTVASELTVQMA Mvan_3713|M.vanbaalenii_PYR-1 AAVNQVAAASYMGGSTSTISAALTAESPQRLLDELSSSRVMATQMSDRIK . : *.: : : : : .: * . : : Mb0024|M.bovis_AF2122/97 DEARSDTTVTAVMPIAQREAIRRR--VARLRAQRAHVLTARRRARRHLAA Rv0024|M.tuberculosis_H37Rv DEARSDTTVTAVMPIAQREAIRRR--VARLRAQRAHVLTARRRARRHLAA MMAR_0043|M.marinum_M NQARADGVAPPVTPLAQREAIRRR--VGRLRAQRAHVLWAHRRARRRLAA MUL_0042|M.ulcerans_Agy99 NQARADGVAPPVTPLAQREAIRRR--VGRLRAQRAHVLWAHRRARRRLAA MAV_0042|M.avium_104 DAGRADAAANPTTPLAQREAMRRR--VMRLRTQHAHVVSAAARARHHHAR Mflv_0888|M.gilvum_PYR-GCK AFRSASARAATAADQSAMSAAQARGAADEAAAVRTDLEAKQRRMQEQIAV Mvan_3713|M.vanbaalenii_PYR-1 AFRAASTRADDAARAAQSSALAARTAAEQASAVRASLQSKQSRLRTQIAE :. . . : .* * . . : :: : * : : * Mb0024|M.bovis_AF2122/97 LRALRYRVAHGPGVALAKLRLPSPSGR----------------------- Rv0024|M.tuberculosis_H37Rv LRALRYRVAHGPGVALAKLRLPSPSGR----------------------- MMAR_0043|M.marinum_M LRLLRYRMLHHHGSRQ---RLSPISGR----------------------- MUL_0042|M.ulcerans_Agy99 LRLLRYRMLHHHGSRQ---RLSPISGR----------------------- MAV_0042|M.avium_104 LLALRYRLRHGVGLAG---LRGPGSDR----------------------- Mflv_0888|M.gilvum_PYR-GCK VQARYEALTTGQRAILADPGPPPPPLPPSSPANDPSIVAMPG--PAVGGS Mvan_3713|M.vanbaalenii_PYR-1 VEALYRALTPDQRAALADPGP-VPPAPPVPPAANPAIMAMPEAIPPVGPG : : . Mb0024|M.bovis_AF2122/97 ------AGIAVHAALSRLGRPYVWGATGP---TSSTVPVWSSGPTPRRVF Rv0024|M.tuberculosis_H37Rv ------AGIAVHAALSRLGRPYVWGATGPNQFDCSGLVQWAYAQAGVHLD MMAR_0043|M.marinum_M ------AGIAVRAALSRLGRPYVWGATGPDRFDCSGLVQWAYAQAGVHLD MUL_0042|M.ulcerans_Agy99 ------AGIAGRAALSRLGRPYVWGVTGPDRFDCSGLVQWAYAQAGVHVD MAV_0042|M.avium_104 ------AALAVRAALSRLGRPYVWGATGPDQFDCSGLVQWSYAQAGIHLD Mflv_0888|M.gilvum_PYR-GCK PGG---ATAVVQAALTRVGSPYSWGATGPDAFDCSGLIKWAFLQNGKSLP Mvan_3713|M.vanbaalenii_PYR-1 PSSSPEGAAVVQAALTRVGAPYSWGATGPDAFDCSGLIKWAFLQNGKSLP . . :***:*:* ** **.*** .* : *: : Mb0024|M.bovis_AF2122/97 TWIAPPINRSTRGSRCRAHRSGRAI--WSSRTPGTCSWRSATIWSSRRPM Rv0024|M.tuberculosis_H37Rv RTTYQQINEGIPVPRS-QVRPGDLV--FPHPGHVQLAIGNNLVVEAPHAG MMAR_0043|M.marinum_M RTTYQQINDGIVVSRS-HIRPGDLV--FPHPGHVQLAIGNNLVVEAPHAG MUL_0042|M.ulcerans_Agy99 RTTYQQINDGIVVSRS-QIRPGDLV--FPHPGHVQLAIGNNPVVEAPHAG MAV_0042|M.avium_104 RTTYQQINEGIPVPRS-QVRPGDLV--FPHAGHVQLAIGNNLVVEAPYSG Mflv_0888|M.gilvum_PYR-GCK RSSQALAQGGQPVATS-DLQPGDIVTFYDDISHAGIYIGEGMMVHASTYG Mvan_3713|M.vanbaalenii_PYR-1 RSSQALAAGGQPVATT-EVQPGDIVTFYSDASHAGIYIGDGNMVHASTYG . . :.* : : . : : Mb0024|M.bovis_AF2122/97 RARRFGSARWATTCR--FGDR Rv0024|M.tuberculosis_H37Rv ASVRVSSLGNNVQIRRPLSGR MMAR_0043|M.marinum_M ASVRISPLGNHVQIRRPL--- MUL_0042|M.ulcerans_Agy99 ASVRISSLGSHVQIRRPL--- MAV_0042|M.avium_104 ASVRISRLGNNVAIRRPI--- Mflv_0888|M.gilvum_PYR-GCK TPVKVAPISSAPIHNVRRY-- Mvan_3713|M.vanbaalenii_PYR-1 TPVKVAPISSAPIYNVRRY-- . :.. .