For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MIVVATTEKDDETQSEEPAASSEDNQDTEDTSQTPDIEVDSVEHAEAESADDDEDNTLLADKREKAARPN RSWARYLRRGAMPLLLAGALALSAFLDWQQWQQHQVKLAGQQAQQAAIAYAQVLTSIDSNNVDQNFRQVL DGATGEFKDMYTQSSVQLRQLLIDNKASAHGVVVDSAVASETVNKVVVLIFVDQTVTNMAVPDPRIDRSR IKMTMEKVDGRWLASKVQLL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_3802 | - | - | 100% (230) | hypothetical protein MUL_3802 |
M. ulcerans Agy99 | MUL_4935 | - | 2e-56 | 50.86% (232) | hypothetical protein MUL_4935 |
M. ulcerans Agy99 | MUL_4938 | - | 2e-36 | 63.21% (106) | hypothetical protein MUL_4938 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2411c | - | 5e-39 | 53.52% (142) | hypothetical protein Mb2411c |
M. gilvum PYR-GCK | Mflv_0004 | - | 3e-62 | 56.50% (223) | hypothetical protein Mflv_0004 |
M. tuberculosis H37Rv | Rv2390c | - | 5e-39 | 53.52% (142) | hypothetical protein Rv2390c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1004c | - | 6e-57 | 46.75% (231) | hypothetical protein MAB_1004c |
M. marinum M | MMAR_3870 | - | 1e-125 | 98.70% (230) | hypothetical protein MMAR_3870 |
M. avium 104 | MAV_0108 | - | 1e-54 | 57.89% (190) | hypothetical protein MAV_0108 |
M. smegmatis MC2 155 | MSMEG_1149 | - | 5e-57 | 56.50% (223) | hypothetical protein MSMEG_1149 |
M. thermoresistible (build 8) | TH_0161 | - | 4e-53 | 50.44% (228) | conserved hypothetical protein |
M. vanbaalenii PYR-1 | Mvan_0965 | - | 6e-64 | 57.27% (220) | hypothetical protein Mvan_0965 |
CLUSTAL 2.0.9 multiple sequence alignment MUL_3802|M.ulcerans_Agy99 -------MIVVATTEKDDETQSEEPAASSEDNQDTEDTSQTPDIEVDSVE MMAR_3870|M.marinum_M MHVQRKEMIVVATTEKDDETQSEEPAASSEDNQDTEDTSQTPDIEVDSVE MAV_0108|M.avium_104 -------MTVTADQERATADDVEQPPD--DDRKATADRTES--------- TH_0161|M.thermoresistible__bu ---------VTLTDEDRDRTDRDETPEPESSEQVVTETSAEEAGETGETG Mvan_0965|M.vanbaalenii_PYR-1 ---------MSVTT-DRDLDDEKTDGEEDTTSQEEPDGTEDSAAEDQQP- Mflv_0004|M.gilvum_PYR-GCK ---------MTVTTQSTRDDEPDTSADDEQTPEGAGPGDADVADAHTETE MSMEG_1149|M.smegmatis_MC2_155 ---------MKLKTDKRRD-VFDEAVDDTEDAEVEALDVAESEDTATEPE MAB_1004c|M.abscessus_ATCC_199 ------MVTMTKEDVDSTNDADTDTADDKETVDSAAETDSEIAEDAASTD Mb2411c|M.bovis_AF2122/97 ---------MAIFGRGHGASEPGGTGEPAETPGR---------------- Rv2390c|M.tuberculosis_H37Rv ---------MAIFGRGHGASEPGGTGEPAETPGR---------------- : MUL_3802|M.ulcerans_Agy99 HAEAESADDDEDNTLLADKREKAARPNRSWAR-YLRRGAMPLLLAGALAL MMAR_3870|M.marinum_M HAEAESADDDEDNTLLADKREKTARPNRSWAR-YLRRGAMPLLLAGALAL MAV_0108|M.avium_104 -------------------QPKTA--ARQWKR-YGRAALVVAVYAGAFGL TH_0161|M.thermoresistible__bu ---------ETGETEKTGEPGEPGPAARSRRAGWLRVGAVTAVFVVLLGL Mvan_0965|M.vanbaalenii_PYR-1 ------------EDSASGDPG-PEAGNRSWRR-RVLAGAIAAVTIGAVAT Mflv_0004|M.gilvum_PYR-GCK -----------PADDDSD--PDEPMTARGWRRRVLLGVVA-LVFAALLAV MSMEG_1149|M.smegmatis_MC2_155 SDEVTGPSGEKPSDKPSDEKPAATVTSPNQRRGVVLGVAAGILVAALLGG MAB_1004c|M.abscessus_ATCC_199 TDAASS--ADSDSETASSDEDGDAAKGASWVR-YAALGAVAAIMVGALVF Mb2411c|M.bovis_AF2122/97 --------------------------GRLTRSVTGWVGAVAVVVS--LAG Rv2390c|M.tuberculosis_H37Rv --------------------------GRLTRSVIGWVGAVAVVVS--LAG : . MUL_3802|M.ulcerans_Agy99 SAFLDWQQWQQHQVKLAGQQAQQAAIAYAQVLTSIDSNNVDQNFRQVLDG MMAR_3870|M.marinum_M SAFLGWQQWQQHQVKLAGQQAQQAAIAYAQVLTSIDSNNVDQNFRQVLDG MAV_0108|M.avium_104 AGGLGWKLWDQRAVAQAGQAAQRTAVDYAQVLTSIDANQVDQNFAAVLGG TH_0161|M.thermoresistible__bu CGFLGWQVWQQRQLDRAADEARQAAVEYARILTSIDADKVDENFAQVLDG Mvan_0965|M.vanbaalenii_PYR-1 AGYLGWLLWQQNQVSRAGEQAQAAAVQYAQILTSIDSAKVDENFDQVLDG Mflv_0004|M.gilvum_PYR-GCK SGVLGWMTWKQHQLTQAGEQARQAAVTYAQVLTSIDSAKVDENFNQVLDG MSMEG_1149|M.smegmatis_MC2_155 GGFVGWQLWQTKQVIAAGNQARDAAVNYAQVLTSIDSNKVDENFDQVLAG MAB_1004c|M.abscessus_ATCC_199 SGIFGWKVWQQHQIDAAGEQALAVAIPYTETLTSIDSNDIDESFRKILNG Mb2411c|M.bovis_AF2122/97 SGWCGWVLFEKHQTDVAAGQALQAARSYVVKLATMDCERIDHNMRDILEG Rv2390c|M.tuberculosis_H37Rv SGWCGWVLFEKHQTDVAAGQALQAARSYVVKLATMDCERIDHNMRDILEG . .* :. . *. * .* *. *:::*. :*..: :* * MUL_3802|M.ulcerans_Agy99 ATGEFKDMYTQSSVQLRQLLIDNKASAHGVVVDSAVASETVNKVVVLIFV MMAR_3870|M.marinum_M ATGEFKDMYTQSSVQLRQLLIDNKASAHGVVVDSAVASETVNKVVVLVFV MAV_0108|M.avium_104 ATGEFKDTYTKASVQLRQLLIDNKATAHGTVVDSAIQSQSRNRVVVLLMV TH_0161|M.thermoresistible__bu ATGEFRDMYSASSAQLRQLLIDNKASARGVVLESAVQSAGEDEVVVLLFI Mvan_0965|M.vanbaalenii_PYR-1 ATGEFKDMYSQSSVQLRQLLIDNKASAHGVVVDSAIQSESKDKVVVLLFV Mflv_0004|M.gilvum_PYR-GCK ATGEFKDMYSESSMQLRQLLIDNKAASRGVVVESAIQSVEEGRVVVLLFV MSMEG_1149|M.smegmatis_MC2_155 ATGEFKDMYSQSSMQLRQLLIENKATAHGVVVESAVQSATKNKAVVLLFV MAB_1004c|M.abscessus_ATCC_199 ATGDLKKDFTPASVQLRQLLLDNKAASHGKVVNSAIQYKSTNKVVLLMMV Mb2411c|M.bovis_AF2122/97 STGEFKDKYGKSSAHLRQLLADNRVATHGTVVAASVKSATTNKVVVLMFI Rv2390c|M.tuberculosis_H37Rv STGEFKDKYGKSSAHLRQLLADNRVATHGTVVAASVKSATTNKVVVLMFI :**:::. : :* :***** :*:.:::* *: ::: ...*:*::: MUL_3802|M.ulcerans_Agy99 DQTVTNMAVPDPRIDRSRIKMTMEKVDGRWLASKVQLL MMAR_3870|M.marinum_M DQTVTNMAVPDPRIDRSRIKMTMEKVDGRWLASKVQLL MAV_0108|M.avium_104 DQTVSNTVRPDGRVDRSRMKITMENVGGRWLASKVELP TH_0161|M.thermoresistible__bu DQTVSNAHVPEPRIDRSRVKMTMRHVDGTWRASKVALP Mvan_0965|M.vanbaalenii_PYR-1 DQSVSNTSVPDPRIDRSRVKMTMEYVDGRWRASKVELP Mflv_0004|M.gilvum_PYR-GCK DQSVTNSAVPDPRIDRSRIKMTMEYVDGRWRAAKVELA MSMEG_1149|M.smegmatis_MC2_155 DQSVQNTAVPDPRIDRSRIKMTMEKVDGQWKASKVELP MAB_1004c|M.abscessus_ATCC_199 DQSITNTQRPDPRVDKSRMKITMEKIDGRWLASKLEYL Mb2411c|M.bovis_AF2122/97 DQSVSNRNSPTPQIDRSRIKVIMDKVNGRWLASKVELL Rv2390c|M.tuberculosis_H37Rv DQSVSNRNSPTPQIDRSRIKVIMDKVNGRWLASKVELL **:: * * ::*:**:*: * :.* * *:*: