For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTALVLTAHGSRDPRSSANARAVAARVARMRPDLDVRLAFCELNSPGLVEVLNGCSGDAVVTPLLLANGY HAGIDIPAQIASCRESLRVRQANVLGTDDRLVSVLRQRVTALGVSRFDDGLGVLVVAIGSSNAAVNSHTA QVGPKLAEGTRWAAVATAFATHPPAALAEAVSRLRRRGAHRVVVAPWFLAHGRLPDRVQRFAADTGLAMA AHPWVRTVWWPRQY
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_3654 | - | - | 100% (224) | hypothetical protein MUL_3654 |
| M. ulcerans Agy99 | MUL_2697 | - | 1e-61 | 59.28% (221) | hypothetical protein MUL_2697 |
| M. ulcerans Agy99 | MUL_1182 | - | 2e-16 | 33.49% (209) | hypothetical protein MUL_1182 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2414 | - | 7e-78 | 65.92% (223) | hypothetical protein Mb2414 |
| M. gilvum PYR-GCK | Mflv_2684 | - | 1e-55 | 55.02% (209) | cobalamin (vitamin B12) biosynthesis CbiX protein |
| M. tuberculosis H37Rv | Rv2393 | - | 7e-78 | 65.92% (223) | hypothetical protein Rv2393 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1658c | - | 1e-47 | 49.52% (208) | hypothetical protein MAB_1658c |
| M. marinum M | MMAR_3712 | - | 1e-116 | 100.00% (211) | hypothetical protein MMAR_3712 |
| M. avium 104 | MAV_2152 | - | 3e-66 | 62.44% (213) | secreted protein |
| M. smegmatis MC2 155 | MSMEG_4529 | - | 1e-61 | 57.49% (207) | secreted protein |
| M. thermoresistible (build 8) | TH_1445 | - | 3e-61 | 56.25% (208) | CONSERVED HYPOTHETICAL PROTEIN |
| M. vanbaalenii PYR-1 | Mvan_3859 | - | 1e-53 | 55.02% (209) | cobalamin (vitamin B12) biosynthesis CbiX protein |
CLUSTAL 2.0.9 multiple sequence alignment
MUL_3654|M.ulcerans_Agy99 MTA--------------------------------------------LVL
MMAR_3712|M.marinum_M MTA--------------------------------------------LVL
Mb2414|M.bovis_AF2122/97 MTAPATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVL
Rv2393|M.tuberculosis_H37Rv MTAPATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVL
MAV_2152|M.avium_104 MST--------------------------------------------LVL
MSMEG_4529|M.smegmatis_MC2_155 ---------------------------------------------MTLVL
TH_1445|M.thermoresistible__bu ------------------------------VTRALAPAPASVAGPPALIL
Mflv_2684|M.gilvum_PYR-GCK ---------------------------------------------MTLIL
Mvan_3859|M.vanbaalenii_PYR-1 ---------------------------------------------MTLIL
MAB_1658c|M.abscessus_ATCC_199 ------------------------------------------MRNPTLVA
*:
MUL_3654|M.ulcerans_Agy99 TAHGSRDPRSSANARAVAARVARMRPDLDVRLAFCELNSPGLVEVLNGCS
MMAR_3712|M.marinum_M TAHGSRDPRSSANARAVAARVARMRPDLDVRLAFCELNSPGLVEVLNGCS
Mb2414|M.bovis_AF2122/97 TAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCR
Rv2393|M.tuberculosis_H37Rv TAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCR
MAV_2152|M.avium_104 TAHGSRDPRSAANAEAVADRLRRMRPGLDVRLAFLELNAPNFVDVLAGLP
MSMEG_4529|M.smegmatis_MC2_155 TAHGSADPRSSANAHAIAGHVRRLLPDTEVRVAFCEQNEPNLADVLTAVE
TH_1445|M.thermoresistible__bu TAHGSADPRSAANAHAIAGHLRRLAPDVEVRVAFCEQNTPNLADVLAQMR
Mflv_2684|M.gilvum_PYR-GCK TAHGSADPRSAATARSIVECIRRLRPDLDARIAFCEQNSPNLRDVLADLP
Mvan_3859|M.vanbaalenii_PYR-1 TAHGSADPRSAQTARAIVDCIRCLRPTLDARIAFCEQSSPNLRDELAALR
MAB_1658c|M.abscessus_ATCC_199 VAHGSRDARFAQNARRVVRQVRSLRPDLDVRLAFLELSEPNLLDVLGDLS
.**** *.* : .*. :. : : * :.*:** * . *.: : *
MUL_3654|M.ulcerans_Agy99 G--DAVVTPLLLANGYHAGIDIPAQIASCRESLRVRQANVLGTDDRLVSV
MMAR_3712|M.marinum_M G--DAVVTPLLLANGYHAGIDIPAQIASCRESLRVRQANVLGTDDRLVSV
Mb2414|M.bovis_AF2122/97 G--AAVVTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSA
Rv2393|M.tuberculosis_H37Rv G--AAVVTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSA
MAV_2152|M.avium_104 DSRRAVVAPLLLASAYHARLDIPEQIARAG-AHGIRQADVLGEDDRLVAV
MSMEG_4529|M.smegmatis_MC2_155 A-G-SVVVPLLLASAYHARIDIPALIAQTG--ADVVQADVLGNDPRLLQV
TH_1445|M.thermoresistible__bu T-G-AVVVPLLLARAYHARVDIPELIAASG--ADVAQADVLGADPRLLHV
Mflv_2684|M.gilvum_PYR-GCK G-RHGVVVPLLLADAYHARVDIPQMIADSG--ADVRQAAVLGEDERLIHV
Mvan_3859|M.vanbaalenii_PYR-1 R-RQAVVVPLLLADAYHARVDIPEMIAASG--ADVRQAGVLGEDDRLIHV
MAB_1658c|M.abscessus_ATCC_199 G--DAVVVPLLLSDAYHARIDLPTVLSAAPARLRVMQACVLGADNRLLAL
.**.****: .*** :*:* :: : ** *** * **:
MUL_3654|M.ulcerans_Agy99 LRQRVTALGVSRFDDGLGVLVVAIGSSNAAVNSHTAQVGPKLAEGTRWAA
MMAR_3712|M.marinum_M LRQRVTALGVSRFDDGLGVLVVAIGSSNAAVNSHTAQVGPKLAEGTRWAA
Mb2414|M.bovis_AF2122/97 LHERLTELGVSPFDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAA
Rv2393|M.tuberculosis_H37Rv LHERLTELGVSPFDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAA
MAV_2152|M.avium_104 LRGRLAEIGVSPLDDDLGVMVVAIGSSNTAANARTAKVASRLAAGTRWAC
MSMEG_4529|M.smegmatis_MC2_155 MRERLTALGVSRFDSSLGVVLTGVGSSHAAANARTAELAADLAEGTRWVG
TH_1445|M.thermoresistible__bu MRGRLSALGVSRFDAGLGVVMVGVGSSHADANARTAAVAQALGEGTRWTG
Mflv_2684|M.gilvum_PYR-GCK LRQRLEHAGVSRLDPRVGILVTAVGSSRAAANANTEAVARELTLTTRWA-
Mvan_3859|M.vanbaalenii_PYR-1 LRQRLEHAGVSRLDPSVGVIVTAVGSSRPAANVRTATVARELTLTTRWT-
MAB_1658c|M.abscessus_ATCC_199 ARRRVTELGIAHP----GVILSAVGSSDSTANTRTRALA------AQWPI
: *: *:: *::: .:*** . .* .* :. ::*
MUL_3654|M.ulcerans_Agy99 VATAFATHPPAALAEAVSRLRRRGAHRVVVAPWFLAHGRLPDRVQRFAAD
MMAR_3712|M.marinum_M VATAFATHPPAALAEAVSRLRRRGAHRVVVAPWFLAHGRLPDRVQRFAAD
Mb2414|M.bovis_AF2122/97 VTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVRGYARE
Rv2393|M.tuberculosis_H37Rv VTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVRGYARE
MAV_2152|M.avium_104 ATTAFATRPEASVARAADQLRRRGARRLVIAPWFLAPGFITDGVSTFARD
MSMEG_4529|M.smegmatis_MC2_155 THVAFATGQDPSVSRAVERLRARGATRLVIAPWFLAHGRITDRVAEYARR
TH_1445|M.thermoresistible__bu VEVAFATGPAPSVPDAVARLRARGADRIAISPWFLAHGRITDRVAGFARG
Mflv_2684|M.gilvum_PYR-GCK ATTAFATGPQPSLTDAAAHLRALGASRLVIAPWFLAHGRITDRVAAFARA
Mvan_3859|M.vanbaalenii_PYR-1 ATTAFATGPHPSPAEAADELRRRGATRLVIAPWFLAHGRITDRVADFAAA
MAB_1658c|M.abscessus_ATCC_199 STTVFATGDPTSLAEAAESLRARGATDIVVAPWFLSPGLLLDRVRAEAAQ
..* * .: . *. ** ** :.::**:*: * : * * *
MUL_3654|M.ulcerans_Agy99 TGLAMAA----HPWVRTVWWPRQY------------
MMAR_3712|M.marinum_M TGLAMAAPLGAHRLVAETVLDRFAQATAGRVAA---
Mb2414|M.bovis_AF2122/97 AGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA---
Rv2393|M.tuberculosis_H37Rv AGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA---
MAV_2152|M.avium_104 NGIRMAAPLGAHRLVAETVLDRYDEALSADAAA---
MSMEG_4529|M.smegmatis_MC2_155 EGIPMAEPLGPHRLVAATVLDRYEEAIEARTAGFAA
TH_1445|M.thermoresistible__bu AGIPMAEPLGPHRLVAATVLDRYEETVAA--AALAA
Mflv_2684|M.gilvum_PYR-GCK HDIPMSAPLGAHRQVAETVLDRFDAALVHRAAA---
Mvan_3859|M.vanbaalenii_PYR-1 QRIPMSAPLGAHRQVAETVLDRFDAALAVHAAA---
MAB_1658c|M.abscessus_ATCC_199 LDMPVAAPLGADRLVADVVVQRYASAIAAPVPTPH-
: :: . * . *