For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAQRRYFAGKRCLVTGAASGIGRATALRLAEQGAELYLTDRDGDGLAQTVSAARALGAQVPEHRVLDISD YDEVAAFAADIHASHPSMDVVLNIAGISAWGTVDRLSHEHWSKMVAVNLMGPIHVIETFVPPMVAAGRGG HLVNVSSAAGLVALPWHAAYSASKYGLRGLSEVLRFDLARHRIGVSVVVPGAVDTPLVNTVEIAGVDRED PQVNRWVNRFSGHAVSPEKAAEKILAGVARNRYLVYTSADIRALYAFKRLAWWPYSVAMRQVNVIFTRAL KPKPVALPQRE
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_1636 | - | - | 100% (291) | short chain alcohol dehydrogenase/reductase |
M. marinum M | MMAR_2600 | - | 4e-45 | 37.94% (253) | short-chain dehydrogenase |
M. marinum M | MMAR_4195 | - | 5e-37 | 37.35% (257) | short-chain type dehydrogenase/reductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3083c | - | 1e-143 | 87.50% (280) | short chain dehydrogenase |
M. gilvum PYR-GCK | Mflv_4313 | - | 1e-127 | 77.62% (286) | short chain dehydrogenase |
M. tuberculosis H37Rv | Rv3057c | - | 1e-143 | 87.50% (280) | short chain dehydrogenase |
M. leprae Br4923 | MLBr_01740 | - | 1e-137 | 81.63% (283) | short chain dehydrogenase |
M. abscessus ATCC 19977 | MAB_3420c | - | 1e-115 | 71.74% (276) | short chain dehydrogenase |
M. avium 104 | MAV_3924 | - | 1e-145 | 85.86% (290) | short chain dehydrogenase |
M. smegmatis MC2 155 | MSMEG_2291 | - | 1e-132 | 81.14% (281) | short chain dehydrogenase |
M. thermoresistible (build 8) | TH_3261 | - | 1e-95 | 81.82% (198) | PUTATIVE ABC transporter ATP-binding protein |
M. ulcerans Agy99 | MUL_3400 | - | 1e-166 | 99.66% (291) | short chain dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_2034 | - | 1e-129 | 79.50% (278) | short chain dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_1636|M.marinum_M MAQR---RYFAGKRCLVTGAASGIGRATALRLAEQGAELYLTDRDGDGLA MUL_3400|M.ulcerans_Agy99 MAQR---RYFAGKRCLVTGAASGIGRATALRLAEQGAELYLTDRDGDGLA MAV_3924|M.avium_104 MAQKASGRYYAGKRCLVTGAASGIGRATALRLAAHGAELYLTDRDGDGLR Mb3083c|M.bovis_AF2122/97 MLQRGAGQYFAGKRCFVTGAASGIGRATALRLAAQGAELYLTDRDRDGLA Rv3057c|M.tuberculosis_H37Rv MLQRGAGQYFAGKRCFVTGAASGIGRATALRLAAQGAELYLTDRDRDGLA MLBr_01740|M.leprae_Br4923 MVKT--AQYFVGKRCFVTGAASGIGRATALRLAAYGAELYLTDRHCDGLA Mflv_4313|M.gilvum_PYR-GCK MAQRSGSDRFSGKRCFVTGAASGIGRATALKLAARGAELYLTDRDADGLA Mvan_2034|M.vanbaalenii_PYR-1 MAHRNGFDDFAGKRCLITGAASGIGRATALKLAARGAELFLTDRDADGLA TH_3261|M.thermoresistible__bu ----------------------------------------VVDELGDRLR MSMEG_2291|M.smegmatis_MC2_155 MAQG---SDFAGKRCFVTGAASGIGRATALALAAAGAELYLTDRDADGLV MAB_3420c|M.abscessus_ATCC_199 MAYE-----FTGKRCFVTGAASGIGRATALRLGREGAELFLTDRAADGLE :.*. * * MMAR_1636|M.marinum_M QTVSAARALGAQVPEHRVLDISDYDEVAAFAADIHASHPSMDVVLNIAGI MUL_3400|M.ulcerans_Agy99 QTVSAARALGAQVPEHRVLDISDYDEVAAFAADIHASHPSMDVVLNIAGI MAV_3924|M.avium_104 LTVEDARALGASVPEHRALDIADYDQVASFAADIHAAHPPMDVVLNIAGV Mb3083c|M.bovis_AF2122/97 QTVCDARALGAQVPEHRVLDVSDYQDVAAFAADIHARHPSMDVVLNIAGV Rv3057c|M.tuberculosis_H37Rv QTVCDARALGAQVPEHRVLDVSDYQDVAAFAADIHARHPSMDVVLNIAGV MLBr_01740|M.leprae_Br4923 QTVSEARALGAQVPEYRALDISDYDEVAAFGADIHARHPSMDIVMNIAGV Mflv_4313|M.gilvum_PYR-GCK LTVADARALGGVVAEHRALDISDHDAVVAFADDIHSRHPAMDVVMNIAGI Mvan_2034|M.vanbaalenii_PYR-1 LTVADARALGAVVAAHRALDISDYDAVAGFGADIHAAHPAMDVVMNIAGV TH_3261|M.thermoresistible__bu RX----------------------------------XHPAMDVVMNIAGV MSMEG_2291|M.smegmatis_MC2_155 QTVADARALGAEVPAHRALDISDYDQVREFAKDIHAAHGSMDVVMNIAGV MAB_3420c|M.abscessus_ATCC_199 SVVEEIKAAGGKVSAYRALDISDHEAVAAFASDILATHPSMDVLLNIAGI * .**:::****: MMAR_1636|M.marinum_M SAWGTVDRLSHEHWSKMVAVNLMGPIHVIETFVPPMVAAGRGGHLVNVSS MUL_3400|M.ulcerans_Agy99 SAWGTVDRLSHEHWSKMVAVNLMGPIHVIETFVPPMVAAGRGGHLVNVSS MAV_3924|M.avium_104 SAWGTVDRLTHEQWRKMIDINLMGPIHVIETFVPPMVAAGRGGHLANVSS Mb3083c|M.bovis_AF2122/97 SAWGTVDQLTHDQWSRMVAINLMGPIHVIETLVPPMVAAGRGGHLVNVSS Rv3057c|M.tuberculosis_H37Rv SAWGTVDQLTHDQWSRMVAINLMGPIHVIETLVPPMVAAGRGGHLVNVSS MLBr_01740|M.leprae_Br4923 SVWGTVDRLTHDQWSNVVAINLMGPIHIIETFVPAILAAGRGGHLVNVSS Mflv_4313|M.gilvum_PYR-GCK SAWGTVDKLTHDDWTSLININLMGPIHVIETFVPPMMEARRGGHLVNVSS Mvan_2034|M.vanbaalenii_PYR-1 SAWGTVDKLTHHHWKSLVDINLMGPIHVIETFVPPMIEARRGGHLVNVSS TH_3261|M.thermoresistible__bu SAWGTVDQLTHQQWKAMIDINLMGPIHVVETFIPPMMAAGRGGHLVNVSS MSMEG_2291|M.smegmatis_MC2_155 SAWGTVDRLSHQQWRSMVDINLMGPIHVIEEFIPPMIEARRGGHLVNVSS MAB_3420c|M.abscessus_ATCC_199 SVWGSVDRLSHQQWRSVVDINLMGPIHVIESFVPAMIKARKGGQIVNVSS *.**:**:*:*..* :: :*******::* ::*.:: * :**::.**** MMAR_1636|M.marinum_M AAGLVALPWHAAYSASKYGLRGLSEVLRFDLARHRIGVSVVVPGAVDTPL MUL_3400|M.ulcerans_Agy99 AAGLVALPWHAAYSASKYGLRGLSEVLRFDLARHRIGVSVVVPGAVDTPL MAV_3924|M.avium_104 AAGLVALPWHAAYSASKYGLRGLSEVLRFDLARHRIGVSVVVPGAVNTPL Mb3083c|M.bovis_AF2122/97 AAGLVGLPWHAAYSASKYGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL Rv3057c|M.tuberculosis_H37Rv AAGLVGLPWHAAYSASKYGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL MLBr_01740|M.leprae_Br4923 AAGLVALPWHAAYSASKYGLRGLSEVLRFDLARYRIGVSVVVPGAVRTPL Mflv_4313|M.gilvum_PYR-GCK AAGIVALPWHAAYSASKYGLRGLSEVLRFDLARYRIGVSVVVPGAVRTPL Mvan_2034|M.vanbaalenii_PYR-1 AAGIVALPWHAAYSASKYGLRGLSEVLRFDLARHRIGVSVVVPGAVRTPL TH_3261|M.thermoresistible__bu AAGLVALPWHAAYSASKYGLRGMSEVLRFDLARHGIGVSVVVPGAVRTGL MSMEG_2291|M.smegmatis_MC2_155 AAGLVALPWHGAYSASKFGLRGVSEVLRFDLARHRIGVSVVVPGAVKTGL MAB_3420c|M.abscessus_ATCC_199 AAGIVALPWHAAYSASKYGLRGVSEVLRFDLARYKIGVTVVVPGAVNTPL ***:*.****.******:****:**********: ***:******* * * MMAR_1636|M.marinum_M VNTVEIAGVDREDPQVNRWVNRFSGHAVSPEKAAEKILAGVARNRYLVYT MUL_3400|M.ulcerans_Agy99 VDTVEIAGVDREDPQVNRWVNRFSGHAVSPEKAAEKILAGVARNRYLVYT MAV_3924|M.avium_104 VNTVEIAGVDRDDPDVARWVRRFAGHAVSPEKAADKILAGVARNRYLIYT Mb3083c|M.bovis_AF2122/97 VNTVEIAGVDRDDPRVNRWVERFSGHAVTPEKAADKILAGVTRNRYLVYT Rv3057c|M.tuberculosis_H37Rv VNTVEIAGVDRDDPRVNRWVERFSGHAVTPEKAADKILAGVTRNRYLVYT MLBr_01740|M.leprae_Br4923 VDTIEIAGVDRQDPRFSRWVDRFRGHAVSAERAAEKILAGVAKNRYLIYT Mflv_4313|M.gilvum_PYR-GCK VDTVRIAGVDRDDPRVQKWTNRFSGHAVSPDVAADKILDGVARNRYLIYT Mvan_2034|M.vanbaalenii_PYR-1 VDTVHIAGVDRDDPNVRKWTDRFAGHAVSPEVAADKILRGVVKNRYLVFT TH_3261|M.thermoresistible__bu VQTVQIAGVDRDDPRVQKWVDRFSGHAVSPERAADKILAGVRRNRYLIYT MSMEG_2291|M.smegmatis_MC2_155 VQTVEIAGVDREDPDVKKWVDRFAGHAISPEKAAAKILAGVRRNRFLIYT MAB_3420c|M.abscessus_ATCC_199 VRTVDIAGVDRENENVARWIGRFVGHAVSPEKVADRILYGIRHNRYLVYT * *: ******:: . :* ** ***::.: .* :** *: :**:*::* MMAR_1636|M.marinum_M SADIRALYAFKRLAWWPYSVAMRQVNVIFTRALKPKPVALPQRE------ MUL_3400|M.ulcerans_Agy99 SADIRALYAFKRLAWWPYSVAMRQVNVIFTRALKPKPVALPQRE------ MAV_3924|M.avium_104 SPDIRALYAFKRLAWWPYSVAMRQVNVIFTRALRPAPATLVRHDQLETHP Mb3083c|M.bovis_AF2122/97 SADIRALYAFKRYAWWPYTLVMRRVNVFFTRALRPGP------------- Rv3057c|M.tuberculosis_H37Rv SADIRALYAFKRYAWWPYTLVMRRVNVFFTRALRPGP------------- MLBr_01740|M.leprae_Br4923 SHDIRVLYGFKRLAWWPYGVVMKQVNVVFTRALRPSPATMRCVEPIKVGV Mflv_4313|M.gilvum_PYR-GCK SLDIRALYLFKRTMWLPYSIAMKQVNPLFTRALRPKTKQR---------- Mvan_2034|M.vanbaalenii_PYR-1 SHDIRALYLFKRTAWVPYSVTMKQVNVLFTRALRPNPKQR---------- TH_3261|M.thermoresistible__bu SADIRALYLFKRLAWAPYSFAMRRVNVLFTRALRPGRP------------ MSMEG_2291|M.smegmatis_MC2_155 SADIRALYTFKRVAWWPYSVAMRQVNVLFTRALRSGTSPR---------- MAB_3420c|M.abscessus_ATCC_199 SVDIRALYLFKRTLWWPYSVAMRVANYAFTNALRPGFQKTGSASSPRDS- * ***.** *** * ** ..*: .* **.**:. MMAR_1636|M.marinum_M -------------- MUL_3400|M.ulcerans_Agy99 -------------- MAV_3924|M.avium_104 EQPDRPVELE---- Mb3083c|M.bovis_AF2122/97 -------------- Rv3057c|M.tuberculosis_H37Rv -------------- MLBr_01740|M.leprae_Br4923 YSQPRSGEGGKSGN Mflv_4313|M.gilvum_PYR-GCK -------------- Mvan_2034|M.vanbaalenii_PYR-1 -------------- TH_3261|M.thermoresistible__bu -------------- MSMEG_2291|M.smegmatis_MC2_155 -------------- MAB_3420c|M.abscessus_ATCC_199 --------------