For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LPWRGLAVPSSGMGVDYLAALRRDGDRIVAVSEAGLDRPVPSCARWTIADLIWHVGVVHTFWRQVAVGAI TGPETYQEPARPPNLVDWFRDGVAETSDTFAGIDPAVPAWTWGRRQDVGFIRRRVAHETAVHCWDAVTAV APEEPIESNLAADGVSEFIDDVLPAMSKDLAGPFQTISLRACDTDTQWTVRVGDGHCHAMPIETVADATV SATASDLVLLLWGRRRPDRVDVDGSAEALRRFLARATF*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_2952 | - | - | 100% (249) | hypothetical protein MUL_2952 |
M. ulcerans Agy99 | MUL_0566 | - | 1e-16 | 29.96% (227) | hypothetical protein MUL_0566 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0339 | - | 7e-13 | 29.27% (205) | hypothetical protein Mb0339 |
M. gilvum PYR-GCK | Mflv_0287 | - | 5e-13 | 29.53% (193) | hypothetical protein Mflv_0287 |
M. tuberculosis H37Rv | Rv0332 | - | 2e-13 | 29.27% (205) | hypothetical protein Rv0332 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3408c | - | 2e-22 | 31.67% (240) | hypothetical protein MAB_3408c |
M. marinum M | MMAR_2829 | - | 1e-140 | 95.20% (250) | hypothetical protein MMAR_2829 |
M. avium 104 | MAV_4822 | - | 1e-14 | 30.30% (231) | hypothetical protein MAV_4822 |
M. smegmatis MC2 155 | MSMEG_3192 | - | 5e-18 | 30.49% (246) | hypothetical protein MSMEG_3192 |
M. thermoresistible (build 8) | TH_0767 | - | 7e-15 | 25.89% (224) | CONSERVED HYPOTHETICAL PROTEIN |
M. vanbaalenii PYR-1 | Mvan_0601 | - | 6e-12 | 31.25% (192) | hypothetical protein Mvan_0601 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0287|M.gilvum_PYR-GCK ---------------------------------------MDFRAALLEQT Mvan_0601|M.vanbaalenii_PYR-1 ---------------------------------------MDFRAALLEQT TH_0767|M.thermoresistible__bu ---------------------------------------VDFRQVLLDET Mb0339|M.bovis_AF2122/97 -----------------------------MRKPASSLAKVDYSSAYLEQT Rv0332|M.tuberculosis_H37Rv -----------------------------MRKPASSLAKVDYSSAYLEQT MAV_4822|M.avium_104 --------------------------MTLGDERERSLTGVDYAGAFLDEN MUL_2952|M.ulcerans_Agy99 -----------------------MLPWRGLAVPSSGMG-VDYLAALRRDG MMAR_2829|M.marinum_M MIGYVHPQHGASGCGLILGAGFPMLPWRGLAVPSPGMGRVDYLAALRRDG MAB_3408c|M.abscessus_ATCC_199 ------------------------------------MTPDEWLEALR-KG MSMEG_3192|M.smegmatis_MC2_155 ---------------------------------------MNRLAIIDAES : . Mflv_0287|M.gilvum_PYR-GCK RAFGELIRSADPATPVPTCGDWTLKQLFRHVGRGNRWAAQIVSERRTEPL Mvan_0601|M.vanbaalenii_PYR-1 RAFGDLIRPADPATPVPTCGEWTLKQLYRHVGRGNRWAAQIISERRNQPL TH_0767|M.thermoresistible__bu RAFGELIRSGDPQTPVPTCGEWTLRQLFRHVGRGHRWAAQIVSDRLSEPL Mb0339|M.bovis_AF2122/97 HAFGELIRNVDQSTPVPTCPGWSLGQLFRHVGRGDRWAAQIVRDRLDHFL Rv0332|M.tuberculosis_H37Rv HAFGELIRNVDQSTPVPTCPGWSLGQLFRHVGRGDRWAAQIVRDRLDHFL MAV_4822|M.avium_104 RAFAELFRDADESMPVPTCPDWTLRQLFRHVGRGDRWAAQIVRDRLDSYL MUL_2952|M.ulcerans_Agy99 DRIVAVSEAG-LDRPVPSCARWTIADLIWHVGVVHTFWRQVAVGAITG-- MMAR_2829|M.marinum_M DRIVSVSEAG-LDRPVPSCAGWTIADLIWHVGVVHTFWRQVAVGAITG-- MAB_3408c|M.abscessus_ATCC_199 IAAVAATPPEYLTQDAPSCPGWTARDLVAHLGGVHRWAVGVIVG----QK MSMEG_3192|M.smegmatis_MC2_155 RRFAEVLAHTAPDARCPTCPDWTAADLLWHLTEVHLFWAAVLFRNVTAED *:* *: :* *: . : : Mflv_0287|M.gilvum_PYR-GCK DPRDVRDGRP--PEDPDGAIEWLNAGAQVLIDAVDRARPDTKVWTFT-GP Mvan_0601|M.vanbaalenii_PYR-1 DPREVRDGKP--PDDHDAAIEWFQRGAQMVIDAVDHVGADARVWTFI-GP TH_0767|M.thermoresistible__bu DPRAVRDGKP--PEDIEAALRWLQGGAQLVLDAVEAVGAGARVWTFL-GP Mb0339|M.bovis_AF2122/97 DPRSVEGGKP--PPDPDDAISWLYGGARLLVDAVEQTGVETPVWTFL-GP Rv0332|M.tuberculosis_H37Rv DPRSVEGGKP--PPDPDDAISWLYGGARLLVDAVEQTGVETPVWTFL-GP MAV_4822|M.avium_104 DPRMVEGGKP--PPDPADAISWLHGGAQRLVDAVELTGVQTPVWTFL-GP MUL_2952|M.ulcerans_Agy99 -PETYQEPAR--PPN---LVDWFRDGVAETSDTFAGIDPAVPAWTWG-RR MMAR_2829|M.marinum_M -PETYQEPAR--PPN---LVDWFRDGVAETSDALAGIDPAVPAWTWG-RR MAB_3408c|M.abscessus_ATCC_199 VPYTDLDPEA--PAG-EDVLEWYTERADKLIATLASSDLDAPTKSPF-GE MSMEG_3192|M.smegmatis_MC2_155 GVAAVEQSKPSRPDSVADLLALREGATSVLLAELSRLDDAEPRWSWFPSD * . : . . : Mflv_0287|M.gilvum_PYR-GCK RPGGWWLRRRLHEVVVHRADAALALG--ADLRLEPEMAADGISEWIELAA Mvan_0601|M.vanbaalenii_PYR-1 RPAGWWIRRRVHETAVHRADAALALG--APFELPDEFAADCLSEWIELAT TH_0767|M.thermoresistible__bu RPAGWWVRRRVHETTVHRADAALALG--AEYTLPAELAADAISEWIELMA Mb0339|M.bovis_AF2122/97 RPAGWWVRRRLHEVAVHRADVAITVG--GEFTLEPNVAADGISEFLERIA Rv0332|M.tuberculosis_H37Rv RPAGWWVRRRLHEVAVHRADVAITVG--GEFTLEPNVAADGISEFLERIA MAV_4822|M.avium_104 RPANWWIRRRLHETAVHRADAAIALG--REFTLRPELAADAITEWLERVA MUL_2952|M.ulcerans_Agy99 QDVGFIRRRVAHETAVHCWDAVTAVA--PEEPIESNLAADGVSEFIDDVL MMAR_2829|M.marinum_M QDVGFIRRRVAHETAVHCWDAVTAVG--PEEPIESELAADGVTEFIDDVL MAB_3408c|M.abscessus_ATCC_199 RPVRFWFRRQAQEVAVHRWDIGHAYRGWDVDPLDAALATDGIGEWSEVFT MSMEG_3192|M.smegmatis_MC2_155 QTVGFTRRMQTYEALMHRVDAELAAG-LPIGAIAADVAAGAVDHAVDVMW : : * *. :* * : : .*:. : . : Mflv_0287|M.gilvum_PYR-GCK NN---RRGPAPLDRGESLHLHATDDKLGPTGEWTVVHDEDGVWWSHNHG- Mvan_0601|M.vanbaalenii_PYR-1 VD---KRHPPALDPGQSIHLHASEEKLGPTGEWTIAHDEDGLSWSHSHS- TH_0767|M.thermoresistible__bu VQA--RRTQLPLERGRSLHLHATDAGLGAVGEWLITSDEEGLDWTHEHG- Mb0339|M.bovis_AF2122/97 VQAGSGGTPLPLEDDDTLHLHATDPGLLEAGGWTVRRDERGVTWSHRHG- Rv0332|M.tuberculosis_H37Rv VQAGSGGTPLPLEDDDTLHLHATDPGLLEAGEWTVRRDERGVTWSHRHG- MAV_4822|M.avium_104 VQAGGQGAPLPLDNADTLHLHATDPGLGDAGEWTVAVEQGRIAWSHEHG- MUL_2952|M.ulcerans_Agy99 PA----MSKDLAGPFQTISLRACDT----DTQWTVRVGDGHCHAMPIET- MMAR_2829|M.marinum_M PA----MSKDLAGPFQTISLRACDT----DTRWTVRVGDGHCHAMPIET- MAB_3408c|M.abscessus_ATCC_199 PRRIGRDGGTPEELRGVRILLKADD---AAGSWLLRADADSIGIVDDDG- MSMEG_3192|M.smegmatis_MC2_155 AWQ---PEGSHFEGAAVVEFVATDT----AQRWQVDVGAAGDWPSAVRSP : : * : Mflv_0287|M.gilvum_PYR-GCK -----KAGVALKGPATGLLLAITRRVTAEQAGLEMFGDTAVWDAWLERTP Mvan_0601|M.vanbaalenii_PYR-1 -----KSSVALRGPVTGLLLAAVRRKTAADAGLEMLGDAAVWDGWLERTP TH_0767|M.thermoresistible__bu -----KGDVALRGPATDLLLALSRRRTVDDLGVELHGDIAVWERWLANTS Mb0339|M.bovis_AF2122/97 -----KGAVALRGGATELLLAMVRRLSVADTGIELLGDAGVWQKWLDRTP Rv0332|M.tuberculosis_H37Rv -----KGAVALRGGATELLLAMVRRLSVADTGIELLGDAGVWQKWLDRTP MAV_4822|M.avium_104 -----KGSVALRGGATDLLLAILRRRPLADTGAELFGDDAVWQRWLDRTP MUL_2952|M.ulcerans_Agy99 -----VADATVSATASDLVLLLWGRR--RPDRVDVDGSAEALRRFLARAT MMAR_2829|M.marinum_M -----VADATVSATASDLVLLLWGRR--RPDRVDVDGAAEALRRFLARAT MAB_3408c|M.abscessus_ATCC_199 -----APDATITASTSDLLLALWHRVP--LSRLAVDGDAAHVERVLDLVR MSMEG_3192|M.smegmatis_MC2_155 DTQVVMASATVRGTAADLALWAWNRG----GSVDTSGEPASLQALDAMVS .:: . .: * * * * . Mflv_0287|M.gilvum_PYR-GCK F--- Mvan_0601|M.vanbaalenii_PYR-1 F--- TH_0767|M.thermoresistible__bu L--- Mb0339|M.bovis_AF2122/97 L--- Rv0332|M.tuberculosis_H37Rv L--- MAV_4822|M.avium_104 L--- MUL_2952|M.ulcerans_Agy99 F--- MMAR_2829|M.marinum_M F--- MAB_3408c|M.abscessus_ATCC_199 I--- MSMEG_3192|M.smegmatis_MC2_155 RGMP