For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VDFRAALLEQTRAFGDLIRPADPATPVPTCGEWTLKQLYRHVGRGNRWAAQIISERRNQPLDPREVRDGK PPDDHDAAIEWFQRGAQMVIDAVDHVGADARVWTFIGPRPAGWWIRRRVHETAVHRADAALALGAPFELP DEFAADCLSEWIELATVDKRHPPALDPGQSIHLHASEEKLGPTGEWTIAHDEDGLSWSHSHSKSSVALRG PVTGLLLAAVRRKTAADAGLEMLGDAAVWDGWLERTPF
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_0601 | - | - | 100% (248) | hypothetical protein Mvan_0601 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0339 | - | 4e-80 | 54.80% (250) | hypothetical protein Mb0339 |
| M. gilvum PYR-GCK | Mflv_0287 | - | 1e-111 | 72.58% (248) | hypothetical protein Mflv_0287 |
| M. tuberculosis H37Rv | Rv0332 | - | 6e-81 | 55.20% (250) | hypothetical protein Rv0332 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3408c | - | 2e-12 | 25.94% (212) | hypothetical protein MAB_3408c |
| M. marinum M | MMAR_0604 | - | 3e-77 | 54.00% (250) | hypothetical protein MMAR_0604 |
| M. avium 104 | MAV_4822 | - | 1e-81 | 55.60% (250) | hypothetical protein MAV_4822 |
| M. smegmatis MC2 155 | MSMEG_0682 | - | 6e-98 | 65.60% (250) | hypothetical protein MSMEG_0682 |
| M. thermoresistible (build 8) | TH_0767 | - | 2e-98 | 65.99% (247) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_0566 | - | 5e-77 | 54.40% (250) | hypothetical protein MUL_0566 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0339|M.bovis_AF2122/97 ---MRKPASSLAKVDYSSAYLEQTHAFGELIRNVDQSTPVPTCPGWSLGQ
Rv0332|M.tuberculosis_H37Rv ---MRKPASSLAKVDYSSAYLEQTHAFGELIRNVDQSTPVPTCPGWSLGQ
MMAR_0604|M.marinum_M -------------MDQVAAYLDQTRAFGELVGNNDQSTPVPSCPGWNLGQ
MUL_0566|M.ulcerans_Agy99 -------------MDQVAAYLDQTRAFGKLIGGNDQSAPVPSCPGWNLGQ
MAV_4822|M.avium_104 MTLGDERERSLTGVDYAGAFLDENRAFAELFRDADESMPVPTCPDWTLRQ
Mvan_0601|M.vanbaalenii_PYR-1 -------------MDFRAALLEQTRAFGDLIRPADPATPVPTCGEWTLKQ
Mflv_0287|M.gilvum_PYR-GCK -------------MDFRAALLEQTRAFGELIRSADPATPVPTCGDWTLKQ
MSMEG_0682|M.smegmatis_MC2_155 -------------MDFRAALLDQTRAFGELIASGDPDTPVPTCPDWTLRQ
TH_0767|M.thermoresistible__bu -------------VDFRQVLLDETRAFGELIRSGDPQTPVPTCGEWTLRQ
MAB_3408c|M.abscessus_ATCC_199 -----------MTPDEWLEALRKGIAAVAATPPEYLTQDAPSCPGWTARD
* * : * .*:* *. :
Mb0339|M.bovis_AF2122/97 LFRHVGRGDRWAAQIVRDRLDHFLDPRSVEGGKPPPDPDDAISWLYGGAR
Rv0332|M.tuberculosis_H37Rv LFRHVGRGDRWAAQIVRDRLDHFLDPRSVEGGKPPPDPDDAISWLYGGAR
MMAR_0604|M.marinum_M LFRHVGRGDRWAAQIVRDRLDSFLDPRNVAGGKPPAAVDDAIAWLQDGAQ
MUL_0566|M.ulcerans_Agy99 LFRHVGRGDRWAAQIVRDRLNSFLDPRNVAGGKPPAAVDDAIAWLQDGAQ
MAV_4822|M.avium_104 LFRHVGRGDRWAAQIVRDRLDSYLDPRMVEGGKPPPDPADAISWLHGGAQ
Mvan_0601|M.vanbaalenii_PYR-1 LYRHVGRGNRWAAQIISERRNQPLDPREVRDGKPPDDHDAAIEWFQRGAQ
Mflv_0287|M.gilvum_PYR-GCK LFRHVGRGNRWAAQIVSERRTEPLDPRDVRDGRPPEDPDGAIEWLNAGAQ
MSMEG_0682|M.smegmatis_MC2_155 LLRHVGRGNRWAAQIISDRLSQELDPRQVRDGKPPDDPQGAIEWLNAGAA
TH_0767|M.thermoresistible__bu LFRHVGRGHRWAAQIVSDRLSEPLDPRAVRDGKPPEDIEAALRWLQGGAQ
MAB_3408c|M.abscessus_ATCC_199 LVAHLGGVHRWAVGVIVGQKVPYTD----LDPEAPAG-EDVLEWYTERAD
* *:* .***. :: : * . ..* .: * *
Mb0339|M.bovis_AF2122/97 LLVDAVEQTGVETPVWTFLGPRPAGWWVRRRLHEVAVHRADVAITVG--G
Rv0332|M.tuberculosis_H37Rv LLVDAVEQTGVETPVWTFLGPRPAGWWVRRRLHEVAVHRADVAITVG--G
MMAR_0604|M.marinum_M LMVDAVEQAGAETPVWTFLGPRPAHWWVRRRLHEVVVHRADAAIALG--Q
MUL_0566|M.ulcerans_Agy99 LMVDAVEQAGAETPVWTFLGPRPAHWWVRRRLHEVVVHRADAAIALG--Q
MAV_4822|M.avium_104 RLVDAVELTGVQTPVWTFLGPRPANWWIRRRLHETAVHRADAAIALG--R
Mvan_0601|M.vanbaalenii_PYR-1 MVIDAVDHVGADARVWTFIGPRPAGWWIRRRVHETAVHRADAALALG--A
Mflv_0287|M.gilvum_PYR-GCK VLIDAVDRARPDTKVWTFTGPRPGGWWLRRRLHEVVVHRADAALALG--A
MSMEG_0682|M.smegmatis_MC2_155 LIVKAVDQVGSEARVWTFLGPRPAGWWIRRRANEVAVHRADAAIALG--A
TH_0767|M.thermoresistible__bu LVLDAVEAVGAGARVWTFLGPRPAGWWVRRRVHETTVHRADAALALG--A
MAB_3408c|M.abscessus_ATCC_199 KLIATLASSDLDAPTKSPFGERPVRFWFRRQAQEVAVHRWDIGHAYRGWD
:: :: : . : * ** :*.**: :*..*** * . :
Mb0339|M.bovis_AF2122/97 EFTLEPNVAADGISEFLERIAVQAGSGGTPLPLEDDDTLHLHATDPGLLE
Rv0332|M.tuberculosis_H37Rv EFTLEPNVAADGISEFLERIAVQAGSGGTPLPLEDDDTLHLHATDPGLLE
MMAR_0604|M.marinum_M QFVLEPEIAADGISEFLERIAVQAGRDGAPLPIEDGDTVHLHATDPGLGD
MUL_0566|M.ulcerans_Agy99 QFVLEPEIAADGISEFLERIAVQAGHDGAPLPIEDGDTVHLHATDPGLGD
MAV_4822|M.avium_104 EFTLRPELAADAITEWLERVAVQAGGQGAPLPLDNADTLHLHATDPGLGD
Mvan_0601|M.vanbaalenii_PYR-1 PFELPDEFAADCLSEWIELATVDKR---HPPALDPGQSIHLHASEEKLGP
Mflv_0287|M.gilvum_PYR-GCK DLRLEPEMAADGISEWIELAANNRR---GPAPLDRGESLHLHATDDKLGP
MSMEG_0682|M.smegmatis_MC2_155 DYDLPLELAADAISEWLERTCVEAKRH-HRVPLAFGQSVHLHATDDGLGP
TH_0767|M.thermoresistible__bu EYTLPAELAADAISEWIELMAVQARR--TQLPLERGRSLHLHATDAGLGA
MAB_3408c|M.abscessus_ATCC_199 VDPLDAALATDGIGEWSEVFTPRRIGRDGGTPEELRGVRILLKADD---A
* .*:* : *: * . * ::
Mb0339|M.bovis_AF2122/97 AGGWTVRRDERGVTWSHRHGKGAVALRGGATELLLAMVRRLSVADTGIEL
Rv0332|M.tuberculosis_H37Rv AGEWTVRRDERGVTWSHRHGKGAVALRGGATELLLAMVRRLSVADTGIEL
MMAR_0604|M.marinum_M VGEWTAAVEDGHITWSHEHGKGTVAVRGGAAELLLAMTRRVSVPDTGIEV
MUL_0566|M.ulcerans_Agy99 VGEWTAAVEDGHITWSPEHGKGTVAVRGGAAELLLAMTRRVSVPDTGIEV
MAV_4822|M.avium_104 AGEWTVAVEQGRIAWSHEHGKGSVALRGGATDLLLAILRRRPLADTGAEL
Mvan_0601|M.vanbaalenii_PYR-1 TGEWTIAHDEDGLSWSHSHSKSSVALRGPVTGLLLAAVRRKTAADAGLEM
Mflv_0287|M.gilvum_PYR-GCK TGEWTVVHDEDGVWWSHNHGKAGVALKGPATGLLLAITRRVTAEQAGLEM
MSMEG_0682|M.smegmatis_MC2_155 TGEWTLVNDEDGVGWSHDHGKGSVALRGPAKDLLLAITGRRTPADLGLEV
TH_0767|M.thermoresistible__bu VGEWLITSDEEGLDWTHEHGKGDVALRGPATDLLLALSRRRTVDDLGVEL
MAB_3408c|M.abscessus_ATCC_199 AGSWLLRADADSIGIVDDDGAPDATITASTSDLLLALWHRVPLSR--LAV
.* * : : .. .:: . . **** * . :
Mb0339|M.bovis_AF2122/97 LGDAGVWQKWLDRTPL
Rv0332|M.tuberculosis_H37Rv LGDAGVWQKWLDRTPL
MMAR_0604|M.marinum_M FGDQAVWQKWLERTPL
MUL_0566|M.ulcerans_Agy99 FGDQAVWQKWLERTPL
MAV_4822|M.avium_104 FGDDAVWQRWLDRTPL
Mvan_0601|M.vanbaalenii_PYR-1 LGDAAVWDGWLERTPF
Mflv_0287|M.gilvum_PYR-GCK FGDTAVWDAWLERTPF
MSMEG_0682|M.smegmatis_MC2_155 FGDTEVWDKMLAAAPF
TH_0767|M.thermoresistible__bu HGDIAVWERWLANTSL
MAB_3408c|M.abscessus_ATCC_199 DGDAAHVERVLDLVRI
** : * . :