For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VDQVAAYLDQTRAFGKLIGGNDQSAPVPSCPGWNLGQLFRHVGRGDRWAAQIVRDRLNSFLDPRNVAGGK PPAAVDDAIAWLQDGAQLMVDAVEQAGAETPVWTFLGPRPAHWWVRRRLHEVVVHRADAAIALGQQFVLE PEIAADGISEFLERIAVQAGHDGAPLPIEDGDTVHLHATDPGLGDVGEWTAAVEDGHITWSPEHGKGTVA VRGGAAELLLAMTRRVSVPDTGIEVFGDQAVWQKWLERTPL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_0566 | - | - | 100% (251) | hypothetical protein MUL_0566 |
M. ulcerans Agy99 | MUL_2952 | - | 1e-16 | 29.96% (227) | hypothetical protein MUL_2952 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0339 | - | 1e-110 | 73.31% (251) | hypothetical protein Mb0339 |
M. gilvum PYR-GCK | Mflv_0287 | - | 2e-82 | 58.00% (250) | hypothetical protein Mflv_0287 |
M. tuberculosis H37Rv | Rv0332 | - | 1e-111 | 73.71% (251) | hypothetical protein Rv0332 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3408c | - | 2e-17 | 28.89% (225) | hypothetical protein MAB_3408c |
M. marinum M | MMAR_0604 | - | 1e-145 | 97.21% (251) | hypothetical protein MMAR_0604 |
M. avium 104 | MAV_4822 | - | 1e-107 | 69.72% (251) | hypothetical protein MAV_4822 |
M. smegmatis MC2 155 | MSMEG_0682 | - | 2e-80 | 58.80% (250) | hypothetical protein MSMEG_0682 |
M. thermoresistible (build 8) | TH_0767 | - | 3e-83 | 58.96% (251) | CONSERVED HYPOTHETICAL PROTEIN |
M. vanbaalenii PYR-1 | Mvan_0601 | - | 7e-77 | 54.40% (250) | hypothetical protein Mvan_0601 |
CLUSTAL 2.0.9 multiple sequence alignment MUL_0566|M.ulcerans_Agy99 -------------MDQVAAYLDQTRAFGKLIGGNDQSAPVPSCPGWNLGQ MMAR_0604|M.marinum_M -------------MDQVAAYLDQTRAFGELVGNNDQSTPVPSCPGWNLGQ Mb0339|M.bovis_AF2122/97 ---MRKPASSLAKVDYSSAYLEQTHAFGELIRNVDQSTPVPTCPGWSLGQ Rv0332|M.tuberculosis_H37Rv ---MRKPASSLAKVDYSSAYLEQTHAFGELIRNVDQSTPVPTCPGWSLGQ MAV_4822|M.avium_104 MTLGDERERSLTGVDYAGAFLDENRAFAELFRDADESMPVPTCPDWTLRQ Mflv_0287|M.gilvum_PYR-GCK -------------MDFRAALLEQTRAFGELIRSADPATPVPTCGDWTLKQ Mvan_0601|M.vanbaalenii_PYR-1 -------------MDFRAALLEQTRAFGDLIRPADPATPVPTCGEWTLKQ MSMEG_0682|M.smegmatis_MC2_155 -------------MDFRAALLDQTRAFGELIASGDPDTPVPTCPDWTLRQ TH_0767|M.thermoresistible__bu -------------VDFRQVLLDETRAFGELIRSGDPQTPVPTCGEWTLRQ MAB_3408c|M.abscessus_ATCC_199 -----------MTPDEWLEALRKGIAAVAATPPEYLTQDAPSCPGWTARD * * : * .*:* *. : MUL_0566|M.ulcerans_Agy99 LFRHVGRGDRWAAQIVRDRLNSFLDPRNVAGGKPPAAVDDAIAWLQDGAQ MMAR_0604|M.marinum_M LFRHVGRGDRWAAQIVRDRLDSFLDPRNVAGGKPPAAVDDAIAWLQDGAQ Mb0339|M.bovis_AF2122/97 LFRHVGRGDRWAAQIVRDRLDHFLDPRSVEGGKPPPDPDDAISWLYGGAR Rv0332|M.tuberculosis_H37Rv LFRHVGRGDRWAAQIVRDRLDHFLDPRSVEGGKPPPDPDDAISWLYGGAR MAV_4822|M.avium_104 LFRHVGRGDRWAAQIVRDRLDSYLDPRMVEGGKPPPDPADAISWLHGGAQ Mflv_0287|M.gilvum_PYR-GCK LFRHVGRGNRWAAQIVSERRTEPLDPRDVRDGRPPEDPDGAIEWLNAGAQ Mvan_0601|M.vanbaalenii_PYR-1 LYRHVGRGNRWAAQIISERRNQPLDPREVRDGKPPDDHDAAIEWFQRGAQ MSMEG_0682|M.smegmatis_MC2_155 LLRHVGRGNRWAAQIISDRLSQELDPRQVRDGKPPDDPQGAIEWLNAGAA TH_0767|M.thermoresistible__bu LFRHVGRGHRWAAQIVSDRLSEPLDPRAVRDGKPPEDIEAALRWLQGGAQ MAB_3408c|M.abscessus_ATCC_199 LVAHLGGVHRWAVGVIVGQKVPYTD----LDPEAPAG-EDVLEWYTERAD * *:* .***. :: : * . ..* .: * * MUL_0566|M.ulcerans_Agy99 LMVDAVEQAGAETPVWTFLGPRPAHWWVRRRLHEVVVHRADAAIALG--Q MMAR_0604|M.marinum_M LMVDAVEQAGAETPVWTFLGPRPAHWWVRRRLHEVVVHRADAAIALG--Q Mb0339|M.bovis_AF2122/97 LLVDAVEQTGVETPVWTFLGPRPAGWWVRRRLHEVAVHRADVAITVG--G Rv0332|M.tuberculosis_H37Rv LLVDAVEQTGVETPVWTFLGPRPAGWWVRRRLHEVAVHRADVAITVG--G MAV_4822|M.avium_104 RLVDAVELTGVQTPVWTFLGPRPANWWIRRRLHETAVHRADAAIALG--R Mflv_0287|M.gilvum_PYR-GCK VLIDAVDRARPDTKVWTFTGPRPGGWWLRRRLHEVVVHRADAALALG--A Mvan_0601|M.vanbaalenii_PYR-1 MVIDAVDHVGADARVWTFIGPRPAGWWIRRRVHETAVHRADAALALG--A MSMEG_0682|M.smegmatis_MC2_155 LIVKAVDQVGSEARVWTFLGPRPAGWWIRRRANEVAVHRADAAIALG--A TH_0767|M.thermoresistible__bu LVLDAVEAVGAGARVWTFLGPRPAGWWVRRRVHETTVHRADAALALG--A MAB_3408c|M.abscessus_ATCC_199 KLIATLASSDLDAPTKSPFGERPVRFWFRRQAQEVAVHRWDIGHAYRGWD :: :: : . : * ** :*.**: :*..*** * . : MUL_0566|M.ulcerans_Agy99 QFVLEPEIAADGISEFLERIAVQAGHDGAPLPIEDGDTVHLHATDPGLGD MMAR_0604|M.marinum_M QFVLEPEIAADGISEFLERIAVQAGRDGAPLPIEDGDTVHLHATDPGLGD Mb0339|M.bovis_AF2122/97 EFTLEPNVAADGISEFLERIAVQAGSGGTPLPLEDDDTLHLHATDPGLLE Rv0332|M.tuberculosis_H37Rv EFTLEPNVAADGISEFLERIAVQAGSGGTPLPLEDDDTLHLHATDPGLLE MAV_4822|M.avium_104 EFTLRPELAADAITEWLERVAVQAGGQGAPLPLDNADTLHLHATDPGLGD Mflv_0287|M.gilvum_PYR-GCK DLRLEPEMAADGISEWIELAANNRR---GPAPLDRGESLHLHATDDKLGP Mvan_0601|M.vanbaalenii_PYR-1 PFELPDEFAADCLSEWIELATVDKR---HPPALDPGQSIHLHASEEKLGP MSMEG_0682|M.smegmatis_MC2_155 DYDLPLELAADAISEWLERTCVEAKRH-HRVPLAFGQSVHLHATDDGLGP TH_0767|M.thermoresistible__bu EYTLPAELAADAISEWIELMAVQARR--TQLPLERGRSLHLHATDAGLGA MAB_3408c|M.abscessus_ATCC_199 VDPLDAALATDGIGEWSEVFTPRRIGRDGGTPEELRGVRILLKADD---A * .*:* : *: * . * :: MUL_0566|M.ulcerans_Agy99 VGEWTAAVEDGHITWSPEHGKGTVAVRGGAAELLLAMTRRVSVPDTGIEV MMAR_0604|M.marinum_M VGEWTAAVEDGHITWSHEHGKGTVAVRGGAAELLLAMTRRVSVPDTGIEV Mb0339|M.bovis_AF2122/97 AGGWTVRRDERGVTWSHRHGKGAVALRGGATELLLAMVRRLSVADTGIEL Rv0332|M.tuberculosis_H37Rv AGEWTVRRDERGVTWSHRHGKGAVALRGGATELLLAMVRRLSVADTGIEL MAV_4822|M.avium_104 AGEWTVAVEQGRIAWSHEHGKGSVALRGGATDLLLAILRRRPLADTGAEL Mflv_0287|M.gilvum_PYR-GCK TGEWTVVHDEDGVWWSHNHGKAGVALKGPATGLLLAITRRVTAEQAGLEM Mvan_0601|M.vanbaalenii_PYR-1 TGEWTIAHDEDGLSWSHSHSKSSVALRGPVTGLLLAAVRRKTAADAGLEM MSMEG_0682|M.smegmatis_MC2_155 TGEWTLVNDEDGVGWSHDHGKGSVALRGPAKDLLLAITGRRTPADLGLEV TH_0767|M.thermoresistible__bu VGEWLITSDEEGLDWTHEHGKGDVALRGPATDLLLALSRRRTVDDLGVEL MAB_3408c|M.abscessus_ATCC_199 AGSWLLRADADSIGIVDDDGAPDATITASTSDLLLALWHRVPLSR--LAV .* * : : .. .:: . . **** * . : MUL_0566|M.ulcerans_Agy99 FGDQAVWQKWLERTPL MMAR_0604|M.marinum_M FGDQAVWQKWLERTPL Mb0339|M.bovis_AF2122/97 LGDAGVWQKWLDRTPL Rv0332|M.tuberculosis_H37Rv LGDAGVWQKWLDRTPL MAV_4822|M.avium_104 FGDDAVWQRWLDRTPL Mflv_0287|M.gilvum_PYR-GCK FGDTAVWDAWLERTPF Mvan_0601|M.vanbaalenii_PYR-1 LGDAAVWDGWLERTPF MSMEG_0682|M.smegmatis_MC2_155 FGDTEVWDKMLAAAPF TH_0767|M.thermoresistible__bu HGDIAVWERWLANTSL MAB_3408c|M.abscessus_ATCC_199 DGDAAHVERVLDLVRI ** : * . :