For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TPDEWLEALRKGIAAVAATPPEYLTQDAPSCPGWTARDLVAHLGGVHRWAVGVIVGQKVPYTDLDPEAPA GEDVLEWYTERADKLIATLASSDLDAPTKSPFGERPVRFWFRRQAQEVAVHRWDIGHAYRGWDVDPLDAA LATDGIGEWSEVFTPRRIGRDGGTPEELRGVRILLKADDAAGSWLLRADADSIGIVDDDGAPDATITAST SDLLLALWHRVPLSRLAVDGDAAHVERVLDLVRI*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_3408c | - | - | 100% (245) | hypothetical protein MAB_3408c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0339 | - | 4e-18 | 29.20% (226) | hypothetical protein Mb0339 |
| M. gilvum PYR-GCK | Mflv_0287 | - | 9e-17 | 30.59% (219) | hypothetical protein Mflv_0287 |
| M. tuberculosis H37Rv | Rv0332 | - | 4e-18 | 29.20% (226) | hypothetical protein Rv0332 |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_2829 | - | 3e-22 | 31.67% (240) | hypothetical protein MMAR_2829 |
| M. avium 104 | MAV_4822 | - | 5e-19 | 31.28% (227) | hypothetical protein MAV_4822 |
| M. smegmatis MC2 155 | MSMEG_0441 | - | 5e-20 | 33.94% (221) | hypothetical protein MSMEG_0441 |
| M. thermoresistible (build 8) | TH_0767 | - | 1e-18 | 32.02% (228) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_2952 | - | 2e-22 | 31.67% (240) | hypothetical protein MUL_2952 |
| M. vanbaalenii PYR-1 | Mvan_0601 | - | 2e-12 | 25.94% (212) | hypothetical protein Mvan_0601 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0287|M.gilvum_PYR-GCK ---------------------------------------MDFRAALLEQT
Mvan_0601|M.vanbaalenii_PYR-1 ---------------------------------------MDFRAALLEQT
TH_0767|M.thermoresistible__bu ---------------------------------------VDFRQVLLDET
Mb0339|M.bovis_AF2122/97 -----------------------------MRKPASSLAKVDYSSAYLEQT
Rv0332|M.tuberculosis_H37Rv -----------------------------MRKPASSLAKVDYSSAYLEQT
MAV_4822|M.avium_104 --------------------------MTLGDERERSLTGVDYAGAFLDEN
MMAR_2829|M.marinum_M MIGYVHPQHGASGCGLILGAGFPMLPWRGLAVPSPGMGRVDYLAALRRDG
MUL_2952|M.ulcerans_Agy99 -----------------------MLPWRGLAVPSSGMG-VDYLAALRRDG
MAB_3408c|M.abscessus_ATCC_199 ------------------------------------MTPDEWLEALR-KG
MSMEG_0441|M.smegmatis_MC2_155 ------------------------------------MDDNTLLTQLQTDV
.
Mflv_0287|M.gilvum_PYR-GCK RAFG--ELIRSADPATPVPTCGDWTLKQLFRHVGRGNRWAAQIVSERRTE
Mvan_0601|M.vanbaalenii_PYR-1 RAFG--DLIRPADPATPVPTCGEWTLKQLYRHVGRGNRWAAQIISERRNQ
TH_0767|M.thermoresistible__bu RAFG--ELIRSGDPQTPVPTCGEWTLRQLFRHVGRGHRWAAQIVSDRLSE
Mb0339|M.bovis_AF2122/97 HAFG--ELIRNVDQSTPVPTCPGWSLGQLFRHVGRGDRWAAQIVRDRLDH
Rv0332|M.tuberculosis_H37Rv HAFG--ELIRNVDQSTPVPTCPGWSLGQLFRHVGRGDRWAAQIVRDRLDH
MAV_4822|M.avium_104 RAFA--ELFRDADESMPVPTCPDWTLRQLFRHVGRGDRWAAQIVRDRLDS
MMAR_2829|M.marinum_M DRIV--SVSEAG-LDRPVPSCAGWTIADLIWHVGVVHTFWRQVAVGAITG
MUL_2952|M.ulcerans_Agy99 DRIV--AVSEAG-LDRPVPSCARWTIADLIWHVGVVHTFWRQVAVGAITG
MAB_3408c|M.abscessus_ATCC_199 IAAV--AATPPEYLTQDAPSCPGWTARDLVAHLGGVHRWAVGVIVG----
MSMEG_0441|M.smegmatis_MC2_155 LAIQSYALGEDADLARAVPTCPGWTVADLLGHLWSIESWVRQILRTR---
.*:* *: :* *: . : :
Mflv_0287|M.gilvum_PYR-GCK PLDPRDVRDGRPPEDPDGAIEWLNAGAQVLIDAVDRARPDTKVWTFT-GP
Mvan_0601|M.vanbaalenii_PYR-1 PLDPREVRDGKPPDDHDAAIEWFQRGAQMVIDAVDHVGADARVWTFI-GP
TH_0767|M.thermoresistible__bu PLDPRAVRDGKPPEDIEAALRWLQGGAQLVLDAVEAVGAGARVWTFL-GP
Mb0339|M.bovis_AF2122/97 FLDPRSVEGGKPPPDPDDAISWLYGGARLLVDAVEQTGVETPVWTFL-GP
Rv0332|M.tuberculosis_H37Rv FLDPRSVEGGKPPPDPDDAISWLYGGARLLVDAVEQTGVETPVWTFL-GP
MAV_4822|M.avium_104 YLDPRMVEGGKPPPDPADAISWLHGGAQRLVDAVELTGVQTPVWTFL-GP
MMAR_2829|M.marinum_M ---PETYQEPARPPN---LVDWFRDGVAETSDALAGIDPAVPAWTWG-RR
MUL_2952|M.ulcerans_Agy99 ---PETYQEPARPPN---LVDWFRDGVAETSDTFAGIDPAVPAWTWG-RR
MAB_3408c|M.abscessus_ATCC_199 QKVPYTDLDPEAPAG-EDVLEWYTERADKLIATLASSDLDAPTKSPF-GE
MSMEG_0441|M.smegmatis_MC2_155 ----ELAEEPQPQDEPTQAVADFLDGIPDYLTAMRAVNADEPCWGFGPKP
: :.
Mflv_0287|M.gilvum_PYR-GCK RPGGWWLRRRLHEVVVHRADAALALG--ADLRLEPEMAADGISEWIELAA
Mvan_0601|M.vanbaalenii_PYR-1 RPAGWWIRRRVHETAVHRADAALALG--APFELPDEFAADCLSEWIELAT
TH_0767|M.thermoresistible__bu RPAGWWVRRRVHETTVHRADAALALG--AEYTLPAELAADAISEWIELMA
Mb0339|M.bovis_AF2122/97 RPAGWWVRRRLHEVAVHRADVAITVG--GEFTLEPNVAADGISEFLERIA
Rv0332|M.tuberculosis_H37Rv RPAGWWVRRRLHEVAVHRADVAITVG--GEFTLEPNVAADGISEFLERIA
MAV_4822|M.avium_104 RPANWWIRRRLHETAVHRADAAIALG--REFTLRPELAADAITEWLERVA
MMAR_2829|M.marinum_M QDVGFIRRRVAHETAVHCWDAVTAVG--PEEPIESELAADGVTEFIDDVL
MUL_2952|M.ulcerans_Agy99 QDVGFIRRRVAHETAVHCWDAVTAVA--PEEPIESNLAADGVSEFIDDVL
MAB_3408c|M.abscessus_ATCC_199 RPVRFWFRRQAQEVAVHRWDIGHAYRGWDVDPLDAALATDGIGEWSEVFT
MSMEG_0441|M.smegmatis_MC2_155 RLAGFWIRRQAHEHAVHHADLQHALG-ADPVGLTPDFCADGVDEVLAMFY
: : ** :* .** * : : ..:* : *
Mflv_0287|M.gilvum_PYR-GCK NN---RRGPAPLDRGESLHLHATDDKLGPTGEWTVVHDEDGVWWSHNHGK
Mvan_0601|M.vanbaalenii_PYR-1 VD---KRHPPALDPGQSIHLHASEEKLGPTGEWTIAHDEDGLSWSHSHSK
TH_0767|M.thermoresistible__bu VQA--RRTQLPLERGRSLHLHATDAGLGAVGEWLITSDEEGLDWTHEHGK
Mb0339|M.bovis_AF2122/97 VQAGSGGTPLPLEDDDTLHLHATDPGLLEAGGWTVRRDERGVTWSHRHGK
Rv0332|M.tuberculosis_H37Rv VQAGSGGTPLPLEDDDTLHLHATDPGLLEAGEWTVRRDERGVTWSHRHGK
MAV_4822|M.avium_104 VQAGGQGAPLPLDNADTLHLHATDPGLGDAGEWTVAVEQGRIAWSHEHGK
MMAR_2829|M.marinum_M PA----MSKDLAGPFQTISLRACDT----DTRWTVRVGDGHCHAMPIETV
MUL_2952|M.ulcerans_Agy99 PA----MSKDLAGPFQTISLRACDT----DTQWTVRVGDGHCHAMPIETV
MAB_3408c|M.abscessus_ATCC_199 PRRIGRDGGTPEELRGVRILLKADD---AAGSWLLRADADSIGIVDDDGA
MSMEG_0441|M.smegmatis_MC2_155 PRQVRFGRTEPVAAP--ILFRTADT----EHAWTVGGTE---PSEPGQAE
: : * : .
Mflv_0287|M.gilvum_PYR-GCK AGVALKGPATGLLLAITRRVTAEQAGLEMFGDTAVWDAWLERTPF-
Mvan_0601|M.vanbaalenii_PYR-1 SSVALRGPVTGLLLAAVRRKTAADAGLEMLGDAAVWDGWLERTPF-
TH_0767|M.thermoresistible__bu GDVALRGPATDLLLALSRRRTVDDLGVELHGDIAVWERWLANTSL-
Mb0339|M.bovis_AF2122/97 GAVALRGGATELLLAMVRRLSVADTGIELLGDAGVWQKWLDRTPL-
Rv0332|M.tuberculosis_H37Rv GAVALRGGATELLLAMVRRLSVADTGIELLGDAGVWQKWLDRTPL-
MAV_4822|M.avium_104 GSVALRGGATDLLLAILRRRPLADTGAELFGDDAVWQRWLDRTPL-
MMAR_2829|M.marinum_M ADATVSATASDLVLLLWGRR--RPDRVDVDGAAEALRRFLARATF-
MUL_2952|M.ulcerans_Agy99 ADATVSATASDLVLLLWGRR--RPDRVDVDGSAEALRRFLARATF-
MAB_3408c|M.abscessus_ATCC_199 PDATITASTSDLLLALWHRVP--LSRLAVDGDAAHVERVLDLVRI-
MSMEG_0441|M.smegmatis_MC2_155 PVATVTASAEDLYLGLWKRRD-LLETAKVEGDTAAVQQALNVALTP
.:: . . * * * : * * .