For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DDTSAGPVVIFGGRSEIGSELARRLAPGATVILAARGADQLDVQVAALKTAGAAAVHTREFDADDVAGHG PLVASIVADHGPIGTAVLAFGILGDQARAERDAEHAIAIVHTDYVAQISLLTHLAAAMRTAGRGALVVFS SVAGARVRRANYVYGSAKAGLDGFASGLADALHGTGVRLLILRPGFVIGRMTEGMAPAPLSCTPDQVAAA TTRALAKGRRTVWIPWALRPMFFVLRPLPQFVWRKMPR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_2299 | - | - | 100% (249) | short chain dehydrogenase |
M. ulcerans Agy99 | MUL_4970 | - | 1e-43 | 40.33% (243) | short chain dehydrogenase |
M. ulcerans Agy99 | MUL_4828 | - | 4e-19 | 33.91% (230) | short-chain type dehydrogenase/reductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3820 | - | 7e-44 | 40.74% (243) | short chain dehydrogenase |
M. gilvum PYR-GCK | Mflv_3100 | - | 3e-93 | 71.08% (249) | short-chain dehydrogenase/reductase SDR |
M. tuberculosis H37Rv | Rv2073c | - | 1e-118 | 84.34% (249) | shortchain dehydrogenase |
M. leprae Br4923 | MLBr_00108 | - | 8e-43 | 38.68% (243) | short chain dehydrogenase |
M. abscessus ATCC 19977 | MAB_2194 | - | 9e-86 | 68.46% (241) | Probabme short-chain dehydrogenase/reductase |
M. marinum M | MMAR_3055 | - | 1e-134 | 97.19% (249) | short chain dehydrogenase |
M. avium 104 | MAV_2423 | - | 1e-117 | 84.34% (249) | short chain dehydrogenase |
M. smegmatis MC2 155 | MSMEG_3879 | - | 1e-102 | 72.87% (247) | short chain dehydrogenase |
M. thermoresistible (build 8) | TH_3128 | - | 1e-101 | 75.51% (245) | PUTATIVE short chain dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_3435 | - | 1e-102 | 74.70% (249) | short-chain dehydrogenase/reductase SDR |
CLUSTAL 2.0.9 multiple sequence alignment MUL_2299|M.ulcerans_Agy99 -MDDTSAGP--------------VVIFGGRSEIGSELARRLAPG--ATVI MMAR_3055|M.marinum_M -MDDTSAGP--------------VVIFGGRSEIGGELARRLAPG--ATVI Rv2073c|M.tuberculosis_H37Rv -MDDTGAAP--------------VVIFGGRSQIGGELARRLAAG--ATMV MAV_2423|M.avium_104 -MDDTGAAP--------------VLILGGRSEIGVELARRLAPG--ATVV MSMEG_3879|M.smegmatis_MC2_155 -MKDTADTDRRV-----------VVIFGGRSEIGTELAVRLAPG--NTVV TH_3128|M.thermoresistible__bu -MKDTGG----L-----------VVIFGGRSEIGAELAARLAPG--ATVL Mflv_3100|M.gilvum_PYR-GCK -MRDTNV----------------VVIFGGRSEIGSELAQRLARG--ATVV Mvan_3435|M.vanbaalenii_PYR-1 -MKDTNAGP--------------VVIFGGRSEIGVEVARRLAPG--ATVV MAB_2194|M.abscessus_ATCC_1997 -MTDTVRHSGQLGDKPLGRRPSTVVIFGGRSEIGLEVATRLAPD--NTVV Mb3820|M.bovis_AF2122/97 MVLDAVGNPQ------------TVLLLGGTSEIGLAICERYLHNSAARIV MLBr_00108|M.leprae_Br4923 MVLDAVGHPQ------------TVLLLGGTSEIGLAICKRYLRNAPARIV : *: *:::** *:** :. * . :: MUL_2299|M.ulcerans_Agy99 LAARGAD-QLDVQVAALKTAGAAAVHTREFDADDVAGHGPLVASIVADHG MMAR_3055|M.marinum_M LAARGAD-RLDVQVAALKTAGAAAVHTREFDADNVAGHGPLVASIVADHG Rv2073c|M.tuberculosis_H37Rv LAARNAD-QLADQAAALRAAGAIAVHTREFDADDLAAHGPLVASLVAEHG MAV_2423|M.avium_104 LAARDAD-RLNDKVDALKAAGASAVHTREFDADDLASHGPLVASVVADHG MSMEG_3879|M.smegmatis_MC2_155 LAARGAD-RLEPQVAAVRDAGAAAVHTCEFDADDIAAHAPVVEEIESAHG TH_3128|M.thermoresistible__bu LAARRAD-RLDDQVAAVAAAGAAAVHTREFDADDLDSHAPLVSGIVDEFG Mflv_3100|M.gilvum_PYR-GCK LAARRPD-DLAPQIEELRRAGAAAVHPVGFDADDLASHQPVVDAIIAEHG Mvan_3435|M.vanbaalenii_PYR-1 LAARRPD-ELQGEVAELQRAGAVAVHTVGFDADDLASHRGVVDGIVAEHG MAB_2194|M.abscessus_ATCC_1997 LAARRAD-DLREEKRRILEAGATGIDCVEFDAGRLDTHESVLDSIIERYG Mb3820|M.bovis_AF2122/97 LACLPDDPRREDAAAAMKQAGARSVELIDFDALDTDSHPKMIEAAFSG-G MLBr_00108|M.leprae_Br4923 LAAMPDDPNREDAVAQMTAVGARSVELIDFEALDTDSHPRMIEQAFTG-G **. * : .** .:. *:* * :: * MUL_2299|M.ulcerans_Agy99 PIGTAVLAFGILGDQARAERDAEHAIAIVHTDYVAQISLLTHLAAAMRTA MMAR_3055|M.marinum_M PIGTAVLAFGILGDQARAERDAEHAIAIVHTDYVAQISLLTHLAAAMRSA Rv2073c|M.tuberculosis_H37Rv PIGTAVLAFGILGDQARAETDAAHAVAIVHTDYVAQVSLLTHLAAAMRTA MAV_2423|M.avium_104 PIGTAVLAYGILGDQARAETDAEHAVAIVHTDYVAQVSMLTHLATAMRAA MSMEG_3879|M.smegmatis_MC2_155 PIDTAVLAFGVLGDQARAEDDAAHAVAVVHTDYVAQVGLLTELARRMRTA TH_3128|M.thermoresistible__bu PIDTAVLAFGILGDQARAESDPAHAVQIVHTDYVAQVSLLTVLADRMRAA Mflv_3100|M.gilvum_PYR-GCK PIGTAVLAFGILGDQARAETDAAHAAAIAHTDYVAQVSLLTVLAVRMREA Mvan_3435|M.vanbaalenii_PYR-1 PIGIAVLAFGILGDQARAEKDPAHAAAIAHTDYVAQVSLLTVLAASMRDA MAB_2194|M.abscessus_ATCC_1997 AIDVAVLAFGLLGDQARAETDSEHAAAIVHIDYVAQIALLTSLAVRMRGV Mb3820|M.bovis_AF2122/97 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLAEKMRAQ MLBr_00108|M.leprae_Br4923 DVDVAIVAFGLLGDAEELWQNQSKAVQIAEINYTAAVSVGVLLGEKMRAQ :. *::*:*:*** . : :* :.. :*.* :.: . *. ** MUL_2299|M.ulcerans_Agy99 GRGALVVFSSVAGARVRRANYVYGSAKAGLDGFASGLADALHGTGVRLLI MMAR_3055|M.marinum_M GRGALVVFSSVAGARVRRANYVYGSAKAGLDGFASGLADALHGTGVRLLI Rv2073c|M.tuberculosis_H37Rv GRGSLVVFSSVAGIRVRRANYVYGSAKAGLDGFASGLADALHGTGVRLLI MAV_2423|M.avium_104 GRGQLVVFSSIAGARVRRANYVYGSAKAGLDGFASGLADALHGTGVRLLI MSMEG_3879|M.smegmatis_MC2_155 GHGRLVVFSSIAGARVRRANYVYGSAKAGLDGFACGLSDALHGTGVHVLI TH_3128|M.thermoresistible__bu GRGRLVVFSSIAGARVRRANYVYGSAKAGLDGFASGLADALHGTGVHLLI Mflv_3100|M.gilvum_PYR-GCK GSGRLVVFSSIAGHRVRRANYVYGSAKAGLDGFCSGLADALHGSGVHLLL Mvan_3435|M.vanbaalenii_PYR-1 GSGTLVVFSSVAGVRVRRANYVYGSAKAGLDGFSSGLADALHGTGVRLLL MAB_2194|M.abscessus_ATCC_1997 GRGALVVFSSIAGWRVRRANYVYGSAKAGLDGFASGLADALHGSGVRLLI Mb3820|M.bovis_AF2122/97 GFGQIIAMSSAAGERVRRANFVYGSTKAGLDGFYLGLSEALREYGVRVLV MLBr_00108|M.leprae_Br4923 GFGQIIVMSSAAGERVRRSNFVYGSTKAGLDGFYLGLSEALHEYGVHVLV * * ::.:** ** ****:*:****:******* **::**: **::*: MUL_2299|M.ulcerans_Agy99 LRPGFVIGRMTEGMAPAPLSCTPDQVAAATTRALAKGRRTVWIPWALRPM MMAR_3055|M.marinum_M VRPGFVIGRMTEGMAPAPLSSTPDQVAAATTRALAKGRRTVWIPWALRPM Rv2073c|M.tuberculosis_H37Rv ARPGFVIGRMTEGMTPAPLSVTPERVAAATARALVNGKRVVWIPWALRPM MAV_2423|M.avium_104 VRPGFVIGRMTEGMTPAPLSSTPAQVAAATARALAKGRRTVWIPWALGPA MSMEG_3879|M.smegmatis_MC2_155 VRPGFVIGHMTEGMEPAPFASTPAQVADAAAKALARGKRAVWVPWVIRPM TH_3128|M.thermoresistible__bu VRPGFVIGRMTEGMDPAPFASTPAQVANAAARALARGRRAVWVPRVIGPL Mflv_3100|M.gilvum_PYR-GCK VRPGFVIGRMTEGMSPAPLSSTPAQVADATVTALNRGRDTVWIPAPLAVL Mvan_3435|M.vanbaalenii_PYR-1 VRPGFVVGRMTQGMSPAPLSSTPGQVAEATVRALRKGRGTVWIPAPLVLL MAB_2194|M.abscessus_ATCC_1997 ARPGFVIGRMSAGMSPAPLSSTPPQVAAATVRALRGGKRTVWIPRPLGAL Mb3820|M.bovis_AF2122/97 IRPGQVRTRMSAHLKEAPLTVDKEYVANLAVTASAKGKELVWAPAAFRYV MLBr_00108|M.leprae_Br4923 IRPGQVRTRMSAHVKEAPLTVNKEYVADLAVTAAAKGKELVWAPATFRYV *** * :*: : **:: ** :. * *: ** * : MUL_2299|M.ulcerans_Agy99 FFVLRPLPQFVWRKMPR MMAR_3055|M.marinum_M FFVLRLLPQFVWRKMPR Rv2073c|M.tuberculosis_H37Rv FVALRLLPRFVWRRMPR MAV_2423|M.avium_104 AAVLRMLPQPIWRRMPR MSMEG_3879|M.smegmatis_MC2_155 AFTTRFVPQVLWRRMPR TH_3128|M.thermoresistible__bu AVTMRFVPRFVWRRMPR Mflv_3100|M.gilvum_PYR-GCK ATALRLMPRWAWRRVKR Mvan_3435|M.vanbaalenii_PYR-1 AFAFRTMPRFVWRRLPR MAB_2194|M.abscessus_ATCC_1997 AFVMRWVPSSVWRRMPR Mb3820|M.bovis_AF2122/97 MMVLRHIPRSIFRKLPI MLBr_00108|M.leprae_Br4923 MMVLRHIPRSIFRKLPI . * :* :*::