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MSAMAGAAQIGAVILGAPLVIGLMRQIRARSEGRCGAGILQPWRDLHKQLRKQQVTPEGTTAVFAVAPAV VAATTLLIAAIAPLVATGSPLDPVGDLFVVVGLLFLGTVALTLAGIDTGTSFGGMGASREITIAALVEPT ILLAVFALSIPAKSANLGAIVAFSLENPAEVVSLAGILAFVALVIVVIAETGRLSVDNPATHLELTMVHE AMVLEYAGPRLGVIEWASGMRLTVLLALLANLFVPWGIAGADPSLIGIAVGIAAISIKVAIAAGVLATVE VFIAKLRLFRVPELLAGSFLLALLAVTSANFFTAQV
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_1893 | hycD | - | 100% (316) | formate hydrogenlyase HycD |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0087 | hycD | 1e-140 | 80.83% (313) | formate hydrogenlyase HYCD |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv0084 | hycD | 1e-140 | 80.83% (313) | formate hydrogenlyase HYCD |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2141 | - | 9e-07 | 23.77% (265) | NADH dehydrogenase subunit H |
| M. marinum M | MMAR_1656 | hycD | 1e-168 | 99.37% (316) | formate hydrogenlyase HycD |
| M. avium 104 | MAV_5112 | - | 1e-138 | 79.68% (315) | hydrogenase-4, C subunit, putative |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MUL_1893|M.ulcerans_Agy99 ----------------MSAMAGAAQIGAVILGAPLVIGLMRQIRARSEGR
MMAR_1656|M.marinum_M -------------MNLMSAMAGAAQIGAVILGAPLVIGLMRQIRARSEGR
Mb0087|M.bovis_AF2122/97 ----------------MSYLAGAAQIGGVMVGAPLVIGMTRQVRARWEGR
Rv0084|M.tuberculosis_H37Rv ----------------MSYLAGAAQIGGVMVGAPLVIGMTRQVRARWEGR
MAV_5112|M.avium_104 -------------MNVMSYVAGAAQILAVMAGAPLVIGAMRQVRARLEGR
MAB_2141|M.abscessus_ATCC_1997 MTGRTDLSQFGIDPLWLVLVKCVAVFAFLVLTVLIAILAERRVLAWMQRR
: : .* : :: . :.* *:: * : *
MUL_1893|M.ulcerans_Agy99 CGA------GILQPWRDLHKQLRKQQVTPEGT-------TAVFAVAPAVV
MMAR_1656|M.marinum_M CGA------GILQPWRDLRKQLRKQQVTPEGT-------TAVFAVAPAVV
Mb0087|M.bovis_AF2122/97 AGA------GLLQPWRDLLKQLGKQQITPAGT-------TIVFAAAPVIV
Rv0084|M.tuberculosis_H37Rv AGA------GLLQPWRDLLKQLGKQQITPAGT-------TIVFAAAPVIV
MAV_5112|M.avium_104 GGG------GVLQPWRDLRKQLGKQQISPQGT-------TVVFAAAPAIV
MAB_2141|M.abscessus_ATCC_1997 IGPNRVGPFGLLQSLADGVKLALKEGLTPAGVDKPIYLLAPIISVVPAIV
* *:**. * * *: ::* *. : :::..*.:*
MUL_1893|M.ulcerans_Agy99 AATTLLIAAIAPLVATGSPLDP---VGDLFVVVGLLFLGTVALTLAGIDT
MMAR_1656|M.marinum_M AATTLLIAAIAPLVATGSPLDP---VGDLFVVVGLLFLGTVALTLAGIDT
Mb0087|M.bovis_AF2122/97 AGTTLLIAAIAPLVATGSPLDP---SADLFAVVGLLFLGTVALTLAGIDT
Rv0084|M.tuberculosis_H37Rv AGTTLLIAAIAPLVATGSPLDP---SADLFAVVGLLFLGTVALTLAGIDT
MAV_5112|M.avium_104 AGTTLLIVAIAPIVATGSPLDA---AADLFAVVGLLFLGTVALTLAGIDT
MAB_2141|M.abscessus_ATCC_1997 AYAVIPFGPVVSVFGHRTPLQLTDLPVAILFVLAVTSVGVYGIVLGGWAS
* :.: : .:..:.. :**: :: *:.: :*. .:.*.* :
MUL_1893|M.ulcerans_Agy99 GTSFGGMGASREITIAALVEPTILLAVFALSIPAKSANLGAIVAFSLENP
MMAR_1656|M.marinum_M GTSFGGMGASREITIAALVEPTILLAVFALSIPAKSANLGAIVAFSLENP
Mb0087|M.bovis_AF2122/97 GTSFGGMGASREITIAALVEPTILLAVFALSIPAGSANLGALVASTIDHP
Rv0084|M.tuberculosis_H37Rv GTSFGGMGASREITIAALVEPTILLAVFALSIPAGSANLGALVASTIDHP
MAV_5112|M.avium_104 GTSFGGMGASREITIAALVEPTILLAVFALSIPAGSANLGALVTNTIDHP
MAB_2141|M.abscessus_ATCC_1997 GSTYPLLGGLRSSAQVISYEIAMGLTFAAVFLLAGTMSTSGIVAAQEGRW
*::: :*. *. : . * :: *:. *: : * : . ..:*: .
MUL_1893|M.ulcerans_Agy99 AEVVSLAGILAFVALVIVVIAETGRLSVDNPATHLELTMVHEAMVLEYAG
MMAR_1656|M.marinum_M AEVVSLAGILAFVALVIVVIAETGRLPVDNPATHLELTMVHEAMVLEYAG
Mb0087|M.bovis_AF2122/97 GHVVSLAGVLAFVALVIVIVAETGRLPVDNPATHLELTMVHEAMVLEYAG
Rv0084|M.tuberculosis_H37Rv GHVVSLAGVLAFVALVIVIVAETGRLPVDNPATHLELTMVHEAMVLEYAG
MAV_5112|M.avium_104 GQVVSLTGLLAFVALVIVIVAETGRLPVDNPATHLELTMVHEAMVLEYAG
MAB_2141|M.abscessus_ATCC_1997 YLFLLLP---SFLVYVTAMVGETNRAPFDLPEAEGELVG---GFHTEYSS
.: *. :*:. * .::.**.* ..* * :. **. .: **:.
MUL_1893|M.ulcerans_Agy99 PRLGVIEWASGMRLTVLLALLANLFVP-----------------------
MMAR_1656|M.marinum_M PRLGVIEWASGMRLTVLLALLANLFVP-----------------------
Mb0087|M.bovis_AF2122/97 PRLALVEWAAGMRLTVLLALLANLFLP-----------------------
Rv0084|M.tuberculosis_H37Rv PRLALVEWAAGMRLTVLLALLANLFLP-----------------------
MAV_5112|M.avium_104 PRLALVEWASGMRLTVLLALLANLFLP-----------------------
MAB_2141|M.abscessus_ATCC_1997 LRFAMFMLAEYINMATVSGLAATMFLGGWHAPWPLSLIDGANTSWLPALW
*:.:. * :.::.: .* *.:*:
MUL_1893|M.ulcerans_Agy99 -----WG-------------------------------------IAGADP
MMAR_1656|M.marinum_M -----WG-------------------------------------IAGADP
Mb0087|M.bovis_AF2122/97 -----WG-------------------------------------IAGAAP
Rv0084|M.tuberculosis_H37Rv -----WG-------------------------------------IAGAAP
MAV_5112|M.avium_104 -----WG-------------------------------------IAGGHP
MAB_2141|M.abscessus_ATCC_1997 FVAKVWGFMFLFMWLRATLPRLRYDQFMRLGWEVLIPVALVWIVVVGVVK
** :.*
MUL_1893|M.ulcerans_Agy99 SLIGIAVGIAAISIKVAIAAGVLATVEVFIAKLRLFRVP--------ELL
MMAR_1656|M.marinum_M SLIGIAVGIAAISIKVAIAAGVLATVEVFIAKLRLFRVP--------ELL
Mb0087|M.bovis_AF2122/97 TALDVLTGVVAVAAKVAILAVLLATFEVFLAKLRLFRVP--------ELL
Rv0084|M.tuberculosis_H37Rv TALDVLTGVVAVAAKVAILAVLLATFEVFLAKLRLFRVP--------ELL
MAV_5112|M.avium_104 SAVDVAIGLAAITAKVTVLAVALAGAEVFIAKLRLFRVP--------ELL
MAB_2141|M.abscessus_ATCC_1997 AMGLYGYGNPSIILGITGVAVSLGSIGLVGVLSRRTQPPKPVLPARFDPM
: * :: :: * *. :. . * : * : :
MUL_1893|M.ulcerans_Agy99 AGSFLLALLAVTSANFFTAQV-------
MMAR_1656|M.marinum_M AGSFLLALLAVTSANFFTAQV-------
Mb0087|M.bovis_AF2122/97 AGSFLLALLAVTAANFFTVGA-------
Rv0084|M.tuberculosis_H37Rv AGSFLLALLAVTAANFFTVGA-------
MAV_5112|M.avium_104 AGSFLLALLAVTAANFFTARA-------
MAB_2141|M.abscessus_ATCC_1997 AGGFPVPPLPGQRVDTGAHPSTKEDADA
**.* :. *. .: :