For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KRPATRVADLLNPAALLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGSES DRALIRAAVDSVHRQVRSTSSSPVSYNAFDPKLQLWVAACLYRYFVEQHEFLHGPLDDGAADSVYLDAKR LGTTLQVPERMWPPDRIAFDEYWKRSLDELHIDPPVREHLRGVASMAFLPWPLRALAGPFNLFATTGFLA PEFRAMMRLDWSQSQQSRFEWLLAALRLADRLIPHRAWILIYQLYLWDMRFRARRGWRVV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_1316 | - | - | 100% (271) | hypothetical protein MUL_1316 |
M. ulcerans Agy99 | MUL_1201 | - | 3e-66 | 49.62% (260) | hypothetical protein MUL_1201 |
M. ulcerans Agy99 | MUL_4835 | - | 1e-09 | 25.00% (216) | hypothetical protein MUL_4835 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2261 | - | 1e-133 | 87.06% (255) | hypothetical protein Mb2261 |
M. gilvum PYR-GCK | Mflv_0330 | - | 8e-63 | 49.07% (269) | hypothetical protein Mflv_0330 |
M. tuberculosis H37Rv | Rv2237 | - | 1e-133 | 87.06% (255) | hypothetical protein Rv2237 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4329c | - | 2e-59 | 46.07% (267) | hypothetical protein MAB_4329c |
M. marinum M | MMAR_3312 | - | 1e-158 | 99.63% (271) | hypothetical protein MMAR_3312 |
M. avium 104 | MAV_2203 | - | 1e-136 | 85.98% (271) | hypothetical protein MAV_2203 |
M. smegmatis MC2 155 | MSMEG_0613 | - | 2e-62 | 48.87% (266) | hypothetical protein MSMEG_0613 |
M. thermoresistible (build 8) | TH_1343 | - | 1e-120 | 77.32% (269) | CONSERVED HYPOTHETICAL PROTEIN |
M. vanbaalenii PYR-1 | Mvan_0410 | - | 4e-65 | 49.07% (269) | hypothetical protein Mvan_0410 |
CLUSTAL 2.0.9 multiple sequence alignment Mb2261|M.bovis_AF2122/97 -------------------------------------------------- Rv2237|M.tuberculosis_H37Rv -------------------------------------------------- MUL_1316|M.ulcerans_Agy99 ----------------------------------------MKRPATRVAD MMAR_3312|M.marinum_M ----------------------------------------MKRPATRVAD MAV_2203|M.avium_104 ----------------------------------------MKRPATRVAD TH_1343|M.thermoresistible__bu ----------------------------------MRLRWGPPRHPTRVVD Mflv_0330|M.gilvum_PYR-GCK MTLNESVPAALPVVERP--------INDVVVDV----PTGRRARRG--DD Mvan_0410|M.vanbaalenii_PYR-1 MTLDESVSAPVPLVERP--------VSESSVPAG---PRARVSTRS--DD MSMEG_0613|M.smegmatis_MC2_155 --MAMTVSEPIPYVERG--------MSESAGPA----PVRRRRRKATFDD MAB_4329c|M.abscessus_ATCC_199 MVTIEQVSEAEAQLAGDGGPGTRSRRNEPVPPAAPLSPWWSWRRRPTVAD Mb2261|M.bovis_AF2122/97 ------MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGT Rv2237|M.tuberculosis_H37Rv ------MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGT MUL_1316|M.ulcerans_Agy99 LLNPAALLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGT MMAR_3312|M.marinum_M LLNPAALLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGT MAV_2203|M.avium_104 LLNPAATLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGT TH_1343|M.thermoresistible__bu LLNPAAALLPAANVIMQLALPGVGYGVLESPVDSGNVYKHPFKRARTTGT Mflv_0330|M.gilvum_PYR-GCK GMLGLGLLAGPANVIMQLARPAVGYGVLESRVESGRVDRHPIKRARTTFT Mvan_0410|M.vanbaalenii_PYR-1 GMLGLGLLAGPANVIMQLARPGVGYGVLESRVESGRIDRHPVKRARTTFT MSMEG_0613|M.smegmatis_MC2_155 GLMGVALLAGPANVIMQLANPGVGYGVVESRVDSGRTDLHPVKRARTTFT MAB_4329c|M.abscessus_ATCC_199 NFMGLALLGGPANIIMQLARPGVGYGVVDSKVESGRADLHPIKRARTTFT * .**:****: *.*****::* *:**. **.****** * Mb2261|M.bovis_AF2122/97 YLAVATIGTESDRALIRGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAA Rv2237|M.tuberculosis_H37Rv YLAVATIGTESDRALIRGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAA MUL_1316|M.ulcerans_Agy99 YLAVATIGSESDRALIRAAVDSVHRQVRSTSSSPVSYNAFDPKLQLWVAA MMAR_3312|M.marinum_M YLAVATIGSESDRALIRAAVDSVHRQVRSTSSSPVSYNAFDPKLQLWVAA MAV_2203|M.avium_104 YLAAATIGTDYDRALICAAVDVAHRQVRSRPSSPVSYNAFDPKLQLWVAA TH_1343|M.thermoresistible__bu YLAAATMGTEADRRLIRDAVNTAHAQVRSTPTSPVSYNAFDPKLQLWVAA Mflv_0330|M.gilvum_PYR-GCK YLAVSTNGTPEQQKAFRRAVNGAHAQVFSTDESPVKYHAFDKDLQLWVGA Mvan_0410|M.vanbaalenii_PYR-1 YLAVSTNGTPEQQAAFRRAVNRAHAQVFSTDESPVKYHAFDKDLQLWVGA MSMEG_0613|M.smegmatis_MC2_155 YLAVATRGTEAQKAAFRRAVNKAHAQVYSTEDSPVQYNAFDKNLQLWVAA MAB_4329c|M.abscessus_ATCC_199 FLAVATLGTPEQKAAFRKATNRAHAQVHSQPGDKVQYNAFDPELQKWVAV :**.:* *: :: : *.: .* ** * . *.*:*** .** **.. Mb2261|M.bovis_AF2122/97 CLYRYFVDQHEFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAF Rv2237|M.tuberculosis_H37Rv CLYRYFVDQHEFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAF MUL_1316|M.ulcerans_Agy99 CLYRYFVEQHEFLHGPLDDGAADSVYLDAKRLGTTLQVPERMWPPDRIAF MMAR_3312|M.marinum_M CLYRYFVEQHEFLHGPLDDGAADSVYLDAKRLGTTLQVPERMWPPDRIAF MAV_2203|M.avium_104 CLYRYFVDQHEFLHGPLDEASADAVYRDAARLGTTLQVPERMWPPDRAAF TH_1343|M.thermoresistible__bu CLFRYYIDMHEFLYGPLDDADADAVYRDARTLGTTLQVREDMWPPDRQAF Mflv_0330|M.gilvum_PYR-GCK CLYKGVVDVHRLFVGEMDEETADRVYVQGRALATMLQVPESMWPADREAF Mvan_0410|M.vanbaalenii_PYR-1 CLYKGVVDVHRLFVGEMDEETADRLYLQGRALATMLQVPEDMWPADRAAF MSMEG_0613|M.smegmatis_MC2_155 CLYKGGVDVLRMFVGEMDDETADRHYRDSVTMGTTLQVPAEMWPADRAAF MAB_4329c|M.abscessus_ATCC_199 CLYKGFVDVYEAFVGPLTGETAERCLQEGAVMGTTLQMPLAMWPKSCAEF **:: :: . : * : *: :. :.* **: *** . * Mb2261|M.bovis_AF2122/97 DEYWKRSLDGLQIDAPVREHLRGVASVA----FLPWPLRAVAGPFNLFAT Rv2237|M.tuberculosis_H37Rv DEYWKRSLDGLQIDAPVREHLRGVASVA----FLPWPLRAVAGPFNLFAT MUL_1316|M.ulcerans_Agy99 DEYWKRSLDELHIDPPVREHLRGVASMA----FLPWPLRALAGPFNLFAT MMAR_3312|M.marinum_M VEYWKRSLDELHIDPPVREHLRGVASMA----FLPWPLRALAGPFNLFAT MAV_2203|M.avium_104 DEYWKRSLDELRIDPPVREHLHGVASLA----FLPWPLRVLAGPFNLFAT TH_1343|M.thermoresistible__bu DEYWKRSLDELRIDPPVREHLLGVAAMA----FLPTPVSATLGRFNLFAT Mflv_0330|M.gilvum_PYR-GCK DRYWAASLDEVHIDDTVREYLYPIAASRLRGLRLPGPLQRRNEELALLIT Mvan_0410|M.vanbaalenii_PYR-1 DRYWQESLDDVHIDDTVREFLYPIAATRLRGLALPGPLQRQTEKLALLIT MSMEG_0613|M.smegmatis_MC2_155 DRYWNEQIEKVHIDDTVRAYLYPIAAGRPKATKLPRFIQKRLDGIALLIT MAB_4329c|M.abscessus_ATCC_199 DEYWAQSMDLVHIDDHVRPYLYRIASAS---IAVPPFMRGPVGAFSRFIT .** .:: ::** ** .* :*: :* : : : * Mb2261|M.bovis_AF2122/97 TGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY Rv2237|M.tuberculosis_H37Rv TGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY MUL_1316|M.ulcerans_Agy99 TGFLAPEFRAMMRLDWSQSQQSRFEWLLAALRLADRLIPHRAWILIYQLY MMAR_3312|M.marinum_M TGFLAPEFRAMMRLDWSQSQQSRFEWLLAALRLADRLIPHRAWILIYQLY MAV_2203|M.avium_104 TGFLAPEFREMMQLDWTPGQQRRFGWLLFSLRLADRLIPHGVWILGYRIY TH_1343|M.thermoresistible__bu TGFLPPEFRDQMKLDWSGAQQRTFERLLAALRIADRVIPREAWQFGYRLY Mflv_0330|M.gilvum_PYR-GCK TGFLPQRFRDEMRLPWGPDHQRRFDRLMKVLRVANTVSPKFVRQFPFNLL Mvan_0410|M.vanbaalenii_PYR-1 TGFLPQRFREEMQLPWDAGQQRRFDRLMAALRAVNSVSPKFVRQFPFNVL MSMEG_0613|M.smegmatis_MC2_155 TGFLPQRFRDEMRLPWDEKRQQRFDRLIAVLRFVNDLLPAPVRAFPFNAL MAB_4329c|M.abscessus_ATCC_199 TGFLPQRFRDEMGFAWDPSRERMFRWLLAVLGLAARLLPNGLRRFPFNAL ****. .** * : * :: * *: * . : * : :. Mb2261|M.bovis_AF2122/97 LWDMRFRARHGRRIV Rv2237|M.tuberculosis_H37Rv LWDMRFRARHGRRIV MUL_1316|M.ulcerans_Agy99 LWDMRFRARRGWRVV MMAR_3312|M.marinum_M LWDMRFRARRGWRVV MAV_2203|M.avium_104 LWDMRSRARRGRRVV TH_1343|M.thermoresistible__bu LWDMRIRARLGRRVV Mflv_0330|M.gilvum_PYR-GCK LKDVDRRIRTGRPLV Mvan_0410|M.vanbaalenii_PYR-1 LKDLDWRVRTGRPLV MSMEG_0613|M.smegmatis_MC2_155 LKDLDWRIRTGRSLV MAB_4329c|M.abscessus_ATCC_199 MLDLDWRIRTGRPLV : *: * * * :*