For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KRPATRVADLLNPAATLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAAATIGTDY DRALICAAVDVAHRQVRSRPSSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLHGPLDEASADAVYRDAAR LGTTLQVPERMWPPDRAAFDEYWKRSLDELRIDPPVREHLHGVASLAFLPWPLRVLAGPFNLFATTGFLA PEFREMMQLDWTPGQQRRFGWLLFSLRLADRLIPHGVWILGYRIYLWDMRSRARRGRRVV*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_2203 | - | - | 100% (271) | hypothetical protein MAV_2203 |
| M. avium 104 | MAV_4880 | - | 2e-66 | 51.15% (260) | hypothetical protein MAV_4880 |
| M. avium 104 | MAV_5226 | - | 3e-07 | 23.26% (172) | hypothetical protein MAV_5226 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2261 | - | 1e-126 | 83.86% (254) | hypothetical protein Mb2261 |
| M. gilvum PYR-GCK | Mflv_0423 | - | 3e-63 | 49.06% (265) | hypothetical protein Mflv_0423 |
| M. tuberculosis H37Rv | Rv2237 | - | 1e-126 | 83.86% (254) | hypothetical protein Rv2237 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4329c | - | 2e-62 | 47.23% (271) | hypothetical protein MAB_4329c |
| M. marinum M | MMAR_3312 | - | 1e-135 | 85.61% (271) | hypothetical protein MMAR_3312 |
| M. smegmatis MC2 155 | MSMEG_3590 | - | 1e-63 | 49.62% (260) | hypothetical protein MSMEG_3590 |
| M. thermoresistible (build 8) | TH_1343 | - | 1e-121 | 77.70% (269) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_1316 | - | 1e-136 | 85.98% (271) | hypothetical protein MUL_1316 |
| M. vanbaalenii PYR-1 | Mvan_0410 | - | 5e-65 | 49.82% (273) | hypothetical protein Mvan_0410 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0423|M.gilvum_PYR-GCK -MNAN-----RIQITRR---------TARWS-DDPVR----------VGD
MSMEG_3590|M.smegmatis_MC2_155 -MTVEGTTHTRISVTRR---------TARWDPDESVT----------VAD
MMAR_3312|M.marinum_M ------------------------------MKRPATR----------VAD
MUL_1316|M.ulcerans_Agy99 ------------------------------MKRPATR----------VAD
Mb2261|M.bovis_AF2122/97 --------------------------------------------------
Rv2237|M.tuberculosis_H37Rv --------------------------------------------------
MAV_2203|M.avium_104 ------------------------------MKRPATR----------VAD
TH_1343|M.thermoresistible__bu ---------------MR---------LRWGPPRHPTR----------VVD
MAB_4329c|M.abscessus_ATCC_199 MVTIEQVSEAEAQLAGDGGPGTRSRRNEPVPPAAPLSPWWSWRRRPTVAD
Mvan_0410|M.vanbaalenii_PYR-1 -MTLDESVSAPVPLVER--PVSES--SVPAGPRARVS--------TRSDD
Mflv_0423|M.gilvum_PYR-GCK AMDFWSFAAGAANVIMQLSRPGVGYGVVESKVDSGNLMKHPWKRARTTFQ
MSMEG_3590|M.smegmatis_MC2_155 AMDFWAFAAGAANVIMQLARPGVGHGVVESPVDSGNLLKHPWKRARTTFS
MMAR_3312|M.marinum_M LLNPAALLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGT
MUL_1316|M.ulcerans_Agy99 LLNPAALLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGT
Mb2261|M.bovis_AF2122/97 ------MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGT
Rv2237|M.tuberculosis_H37Rv ------MLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGT
MAV_2203|M.avium_104 LLNPAATLLPAANVIMQLSLPGVGYGVLESPVDSGNVYKHPFKRARTTGT
TH_1343|M.thermoresistible__bu LLNPAAALLPAANVIMQLALPGVGYGVLESPVDSGNVYKHPFKRARTTGT
MAB_4329c|M.abscessus_ATCC_199 NFMGLALLGGPANIIMQLARPGVGYGVVDSKVESGRADLHPIKRARTTFT
Mvan_0410|M.vanbaalenii_PYR-1 GMLGLGLLAGPANVIMQLARPGVGYGVLESRVESGRIDRHPVKRARTTFT
.**:****: ****:**::* *:**. ** ******
Mflv_0423|M.gilvum_PYR-GCK YLAVAIFGSDDDRAAFRAAVDEAHRHVKSTPSSPVRYNAFDRDLQMWVAA
MSMEG_3590|M.smegmatis_MC2_155 YLAVAILGNDEDRAAFRTAVDGAHRQVRSGPQSPVRYNAFDRDLQMWVAA
MMAR_3312|M.marinum_M YLAVATIGSESDRALIRAAVDSVHRQVRSTSSSPVSYNAFDPKLQLWVAA
MUL_1316|M.ulcerans_Agy99 YLAVATIGSESDRALIRAAVDSVHRQVRSTSSSPVSYNAFDPKLQLWVAA
Mb2261|M.bovis_AF2122/97 YLAVATIGTESDRALIRGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAA
Rv2237|M.tuberculosis_H37Rv YLAVATIGTESDRALIRGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAA
MAV_2203|M.avium_104 YLAAATIGTDYDRALICAAVDVAHRQVRSRPSSPVSYNAFDPKLQLWVAA
TH_1343|M.thermoresistible__bu YLAAATMGTEADRRLIRDAVNTAHAQVRSTPTSPVSYNAFDPKLQLWVAA
MAB_4329c|M.abscessus_ATCC_199 FLAVATLGTPEQKAAFRKATNRAHAQVHSQPGDKVQYNAFDPELQKWVAV
Mvan_0410|M.vanbaalenii_PYR-1 YLAVSTNGTPEQQAAFRRAVNRAHAQVFSTDESPVKYHAFDKDLQLWVGA
:**.: *. :: : *.: .* :* * . * *:*** .** **..
Mflv_0423|M.gilvum_PYR-GCK CLFVGLEDTYQLLRGEMTAEQADHFYASAWTLGTTLQVTEDQWPPTRADF
MSMEG_3590|M.smegmatis_MC2_155 CLFVGLEDTYQLLRGAMTPEQAEQFYASAATLGTTLQVSPDQWPATRAGF
MMAR_3312|M.marinum_M CLYRYFVEQHEFLHGPLDDGAADSVYLDAKRLGTTLQVPERMWPPDRIAF
MUL_1316|M.ulcerans_Agy99 CLYRYFVEQHEFLHGPLDDGAADSVYLDAKRLGTTLQVPERMWPPDRIAF
Mb2261|M.bovis_AF2122/97 CLYRYFVDQHEFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAF
Rv2237|M.tuberculosis_H37Rv CLYRYFVDQHEFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAF
MAV_2203|M.avium_104 CLYRYFVDQHEFLHGPLDEASADAVYRDAARLGTTLQVPERMWPPDRAAF
TH_1343|M.thermoresistible__bu CLFRYYIDMHEFLYGPLDDADADAVYRDARTLGTTLQVREDMWPPDRQAF
MAB_4329c|M.abscessus_ATCC_199 CLYKGFVDVYEAFVGPLTGETAERCLQEGAVMGTTLQMPLAMWPKSCAEF
Mvan_0410|M.vanbaalenii_PYR-1 CLYKGVVDVHRLFVGEMDEETADRLYLQGRALATMLQVPEDMWPADRAAF
**: : :. : * : *: .. :.* **: ** *
Mflv_0423|M.gilvum_PYR-GCK DRYWDEACGQVAMDDVVRSYLLDLVD----LRMINPVLGIPFRPLLKFLT
MSMEG_3590|M.smegmatis_MC2_155 DDYWNAACGQVAVDDVVATYLRDLVH----LKMINPLLALPFRPLLAFLT
MMAR_3312|M.marinum_M VEYWKRSLDELHIDPPVREHLRGVAS----MAFLPWPLRALAGPFNLFAT
MUL_1316|M.ulcerans_Agy99 DEYWKRSLDELHIDPPVREHLRGVAS----MAFLPWPLRALAGPFNLFAT
Mb2261|M.bovis_AF2122/97 DEYWKRSLDGLQIDAPVREHLRGVAS----VAFLPWPLRAVAGPFNLFAT
Rv2237|M.tuberculosis_H37Rv DEYWKRSLDGLQIDAPVREHLRGVAS----VAFLPWPLRAVAGPFNLFAT
MAV_2203|M.avium_104 DEYWKRSLDELRIDPPVREHLHGVAS----LAFLPWPLRVLAGPFNLFAT
TH_1343|M.thermoresistible__bu DEYWKRSLDELRIDPPVREHLLGVAA----MAFLPTPVSATLGRFNLFAT
MAB_4329c|M.abscessus_ATCC_199 DEYWAQSMDLVHIDDHVRPYLYRIAS---ASIAVPPFMRGPVGAFSRFIT
Mvan_0410|M.vanbaalenii_PYR-1 DRYWQESLDDVHIDDTVREFLYPIAATRLRGLALPGPLQRQTEKLALLIT
** : . : :* * .* :. : : : : *
Mflv_0423|M.gilvum_PYR-GCK AGFLAPVFRDALGLTWGDGRQRLFERLFLCVAFVNRFIPGFLRQGGSHVL
MSMEG_3590|M.smegmatis_MC2_155 TGFLAPVFREVLGLKWGRGRQRLFEWLFLLVALGNRFLPIFVRQGTSYLL
MMAR_3312|M.marinum_M TGFLAPEFRAMMRLDWSQSQQSRFEWLLAALRLADRLIPHRAWILIYQLY
MUL_1316|M.ulcerans_Agy99 TGFLAPEFRAMMRLDWSQSQQSRFEWLLAALRLADRLIPHRAWILIYQLY
Mb2261|M.bovis_AF2122/97 TGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY
Rv2237|M.tuberculosis_H37Rv TGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLADRLIPHRAWIFVYQLY
MAV_2203|M.avium_104 TGFLAPEFREMMQLDWTPGQQRRFGWLLFSLRLADRLIPHGVWILGYRIY
TH_1343|M.thermoresistible__bu TGFLPPEFRDQMKLDWSGAQQRTFERLLAALRIADRVIPREAWQFGYRLY
MAB_4329c|M.abscessus_ATCC_199 TGFLPQRFRDEMGFAWDPSRERMFRWLLAVLGLAARLLPNGLRRFPFNAL
Mvan_0410|M.vanbaalenii_PYR-1 TGFLPQRFREEMQLPWDAGQQRRFDRLMAALRAVNSVSPKFVRQFPFNVL
:***. ** : : * .:: * *: : . *
Mflv_0423|M.gilvum_PYR-GCK LADVRMRVRRHRQLV
MSMEG_3590|M.smegmatis_MC2_155 LADVRRRARAGLPLI
MMAR_3312|M.marinum_M LWDMRFRARRGWRVV
MUL_1316|M.ulcerans_Agy99 LWDMRFRARRGWRVV
Mb2261|M.bovis_AF2122/97 LWDMRFRARHGRRIV
Rv2237|M.tuberculosis_H37Rv LWDMRFRARHGRRIV
MAV_2203|M.avium_104 LWDMRSRARRGRRVV
TH_1343|M.thermoresistible__bu LWDMRIRARLGRRVV
MAB_4329c|M.abscessus_ATCC_199 MLDLDWRIRTGRPLV
Mvan_0410|M.vanbaalenii_PYR-1 LKDLDWRVRTGRPLV
: *: * * ::