For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TTYDTDVLVVGGGPGGLATALNARKRGLSVIVADPRESPIDKACGEGLMPGGLAELKSLDVDPAGVPFQG IAYVSQQRRAEARFRTGPGRGVRRTTVHATLAARAKEQDAEWIRTRVTDVVQDAHGVTAAGVRAKWLVAA DGLHSAVRRAVGITATAGTPRRYGVRRHYRVPAWSEFVEVHWSPWGEAYVTPVEPDLVGVAILSRQRPEI DWFPWLAQQLRGASPGAARGCGPLRQVVSRRVAGRVLLVGDAAGYEDALTGEGITLAVKQAAAAVRAIAD NDPASYEAAWHRVTRSYRWLTRGLVLASAPRPARRAIVPACALLPPVFPVWGKYPGKLTAQSGGHQADAA HPGHRLIPAPPKPSLPARIQIGPIPSAAHCQPSAPGVPLLPSAPAAPLPNWPYPPAPPEAAPPPAPPGPP G*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_0979 | - | - | 100% (422) | oxidoreductase |
M. ulcerans Agy99 | MUL_0663 | - | 1e-10 | 26.93% (323) | FAD-linked oxidoreductase |
M. ulcerans Agy99 | MUL_3509 | - | 1e-06 | 36.28% (113) | proline rich membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1170c | - | 1e-160 | 83.89% (329) | putative oxidoreductase |
M. gilvum PYR-GCK | Mflv_5142 | - | 3e-79 | 47.56% (328) | monooxygenase, FAD-binding |
M. tuberculosis H37Rv | Rv1138c | - | 1e-160 | 83.89% (329) | oxidoreductase |
M. leprae Br4923 | MLBr_02276 | - | 5e-11 | 27.80% (313) | putative FAD-linked oxidoreductase |
M. abscessus ATCC 19977 | MAB_3929 | - | 5e-14 | 25.71% (354) | oxidoreductase |
M. marinum M | MMAR_4315 | - | 0.0 | 99.39% (329) | oxidoreductase |
M. avium 104 | MAV_1278 | - | 1e-156 | 82.82% (326) | oxidoreductase |
M. smegmatis MC2 155 | MSMEG_0811 | - | 7e-84 | 50.45% (331) | oxidoreductase |
M. thermoresistible (build 8) | TH_1880 | - | 1e-12 | 29.69% (357) | flavin-type hydroxylase |
M. vanbaalenii PYR-1 | Mvan_1194 | - | 1e-81 | 49.39% (330) | FAD dependent oxidoreductase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_5142|M.gilvum_PYR-GCK -----MIDLVVAGGGPAGLATAIHAARAGLETVVIEQRTGPIDKACGEGL Mvan_1194|M.vanbaalenii_PYR-1 -----MIDLVVAGGGPAGLATAIHAARAGLDTVVVEQRTGPIDKACGEGL MSMEG_0811|M.smegmatis_MC2_155 -----MIDLLVAGGGPAGLATAIYAARAGLVTVVVEPRPGPIDKACGEGL MUL_0979|M.ulcerans_Agy99 -MTTYDTDVLVVGGGPGGLATALNARKRGLSVIVADPRESPIDKACGEGL MMAR_4315|M.marinum_M -MTTYDTDVLVVGGGPGGLATALNARKRGLSVIVADPRESPIDKACGEGL Mb1170c|M.bovis_AF2122/97 -MTSYDTDLLVVGGGPGGLATALHARARGLSVIVAEPRENPIDKACGEGL Rv1138c|M.tuberculosis_H37Rv -MTSYDTDLLVVGGGPGGLATALHARARGLSVIVAEPRENPIDKACGEGL MAV_1278|M.avium_104 --MAYDADLLVVGGGPGGLATALHARRLGLSVIVAEPREAPIDKACGEGL MLBr_02276|M.leprae_Br4923 MRVETSADVVVVGAGPAGSAAATWAARAGNDVIVIDSVCFPRDKACGDGL MAB_3929|M.abscessus_ATCC_1997 --MQTSADLVVVGAGPAGSAAAAWAARSGREVVLVDSAVFPRDKTCGDGL TH_1880|M.thermoresistible__bu -----VYDVIVVGGGPTGMMLAGELRLHGVRVLVVEKNSEPPAHVRSLGL *::*.*.** * * * .:: : * :. . ** Mflv_5142|M.gilvum_PYR-GCK MPHAVRQLALLGAQ----PAGIAFRGISYFDADHAVTALFDS----GHGL Mvan_1194|M.vanbaalenii_PYR-1 MPHAVRQLNLLGAQ----PEGRCFQGVSYFDGSRGVTARFDS----GAGL MSMEG_0811|M.smegmatis_MC2_155 MPHAVRQLDRLDVH----PDGRAFRGIRYLDGRHTAEARFRD----GNGL MUL_0979|M.ulcerans_Agy99 MPGGLAELKSLDVD----PAGVPFQGIAYVSQQRRAEARFRT----GPGR MMAR_4315|M.marinum_M MPGGLAELKSLDVD----PAGVPFQGIAYVSQQRRAEARFRT----GPGR Mb1170c|M.bovis_AF2122/97 MPGGLAELTSLGVD----PVGLPFHGIAYVGEHRRVQARFRT----GPGR Rv1138c|M.tuberculosis_H37Rv MPGGLAELTSLGVD----PVGLPFHGIAYVGEHRRVQARFRT----GPGR MAV_1278|M.avium_104 MPGGLAALTALGVD----PAGMPFQGIAYLSEHRRAQARFRD----GPGR MLBr_02276|M.leprae_Br4923 TPRAVAELKRLGLDD-WLNTRIRHRGLRMSGFGGEVEVDWPGPSFPSTSS MAB_3929|M.abscessus_ATCC_1997 TPRAVEQLELLGLRP-WLDEHIRYRGLRLHGFGGNLEVPWPGTSFGGTGS TH_1880|M.thermoresistible__bu HVRSIEMLDQRGLLDRFLAHGQRHPVGGFFAAIAKPPAELDT--AHGYVL .: * . . . . Mflv_5142|M.gilvum_PYR-GCK GVRRKTLHAALLTEADRAGVKLVH-AKAGPLTQDADSVSVNG-------- Mvan_1194|M.vanbaalenii_PYR-1 GVRRTTLHAALLQAARAAGVTLVH-DKIGTLTQDAESVSVNG-------- MSMEG_0811|M.smegmatis_MC2_155 GVRRTVLHAALADAAAAAGVRVVA-GQVDTIIQTATTVCAAG-------- MUL_0979|M.ulcerans_Agy99 GVRRTTVHATLAARAKEQDAEWIR-TRVTDVVQDAHGVTAAG-------- MMAR_4315|M.marinum_M GVRRTTLHATLAARAKEQDAEWIR-TRVTDVVQDAHGVTAAG-------- Mb1170c|M.bovis_AF2122/97 GVRRTTLHAALAARAKEQDTEWIR-SRVATIQQDAHGVTAAG-------- Rv1138c|M.tuberculosis_H37Rv GVRRTTLHAALAARAKEQDTEWIR-SRVATIQQDAHGVTAAG-------- MAV_1278|M.avium_104 GVRRTTLHAALAARAKEQDTEWIR-ARVSSVAQDAHGVSAAG-------- MLBr_02276|M.leprae_Br4923 AVPRLELDDRIRKVAENSGARMLLGTKAVSVYHDSSRRAASVTLADG--- MAB_3929|M.abscessus_ATCC_1997 AVRRTELDDKIRQVAVDSGAKMAESTKAVDVERDSAGRITSVRVLDDNGP TH_1880|M.thermoresistible__bu GIRQPVTDRLLAEWAAERGAVIRRGCAVVGLDQDAAGITVELADG----- .: : . : * .. : : : . Mflv_5142|M.gilvum_PYR-GCK --FRARYLAAADGLHSPIRARLGLELPTAGTKRWGLKRHIAVAP-----W Mvan_1194|M.vanbaalenii_PYR-1 --FRARYLAAADGLHSPIRARLGLELPPGRARRWGLKRHVAVAP-----W MSMEG_0811|M.smegmatis_MC2_155 --FRARYLAAADGLHSPIRRSLGLAHDESPRRRWGIRRHIQIAP-----W MUL_0979|M.ulcerans_Agy99 --VRAKWLVAADGLHSAVRRAVGITATAGTPRRYGVRRHYRVPA-----W MMAR_4315|M.marinum_M --VRAKWLVAADGLHSAVRRAVGITATAGTPRRYGVRRHYRVPA-----W Mb1170c|M.bovis_AF2122/97 --VRAKWLVAADGLHSAVRRAVGIKATAGTPRRYGVRWHYRLPV-----W Rv1138c|M.tuberculosis_H37Rv --VRAKWLVAADGLHSAVRRAVGIKATAGTPRRYGVRWHYRLPV-----W MAV_1278|M.avium_104 --VRARWLVAADGLHSTVRRAVGIAATAGTPRRYGVRWHYRVPA-----W MLBr_02276|M.leprae_Br4923 TEVGCRQLIIADGARSPLGRKLGRSWHQKTVYGVAARGYLTTPRSDDLWL MAB_3929|M.abscessus_ATCC_1997 GEIACKAVIVADGVRSTLGKILGREWHKDTVYAVAGRAYIESARGDEEWM TH_1880|M.thermoresistible__bu SVQRARYLVGCDGGRSTVRKLAGIGFPGEPARSETLLGEMSLSAD----- .: : .** :*.: * . Mflv_5142|M.gilvum_PYR-GCK SDMVEVYWSDDPGS-GEAYVTPVAPD--CVGIALLTSRQG----GFDEHM Mvan_1194|M.vanbaalenii_PYR-1 SDFVEVYWSPRPDA-GEAYVTPVADD--CVGIAILTSRQG----NFETHL MSMEG_0811|M.smegmatis_MC2_155 SDCVEVYWAPDARVNAEAYVTPVADD--CVGVAVLTSTRG----SFAEHL MUL_0979|M.ulcerans_Agy99 SEFVEVHWSP----WGEAYVTPVEPD--LVGVAILSRQR--------PEI MMAR_4315|M.marinum_M SEFVEVHWSP----WGEAYVTPVEPD--LVGVAILSRQR--------PEI Mb1170c|M.bovis_AF2122/97 SDFVEVHWSR----WGEAYVTPVEPD--LVGVAILSRQR--------PEL Rv1138c|M.tuberculosis_H37Rv SDFVEVHWSR----WGEAYVTPVEPD--LVGVAILSRQR--------PEL MAV_1278|M.avium_104 SEFVEVHWSR----WGEAYVTPVEPD--LVGVAILSRAR--------PDL MLBr_02276|M.leprae_Br4923 TSHLELRSPDGAVLPGYGWIFPLGNGEVNIGVGALSTSKRPADLALRSLI MAB_3929|M.abscessus_ATCC_1997 TSHLELRSPEGDVLPGYGWIFPLGGGQINIGVGALATSKRPADAALRPLI TH_1880|M.thermoresistible__bu PATVAAVVAEVRKTQLRFGAMPLGDGVYRVIVPAEGVAGDRAEPTLDEFR . : . *: . : : Mflv_5142|M.gilvum_PYR-GCK AAFPELRDR---IAGFAHEPDRAAGPLRQRVRRRVAGRVLLVGDAAGYVD Mvan_1194|M.vanbaalenii_PYR-1 DAFPALRAR---LEGLSHEPDRAAGPLRQRVQRRVAGRVLLVGDAAGYVD MSMEG_0811|M.smegmatis_MC2_155 AQFPGLAAR---LDGLPHGRDRAAGPLLQKVRGRVAGRVLLVGDAAGYID MUL_0979|M.ulcerans_Agy99 DWFPWLAQQ---LRGASPGAARGCGPLRQVVSRRVAGRVLLVGDAAGYED MMAR_4315|M.marinum_M DWFPWLAQQ---LRGASPGAARGCGPLRQVVSRRVAGRVLLVGDAAGYED Mb1170c|M.bovis_AF2122/97 AWFPSLAHH---LQDASRGHARGCGPLRQVVSRRVAGRVLLVGDAAGYED Rv1138c|M.tuberculosis_H37Rv AWFPSLAHH---LQDASRGHARGCGPLRQVVSRRVAGRVLLVGDAAGYED MAV_1278|M.avium_104 GWFPGLAER---LRAADRGRPRGCGPLRQVVSRRVAGRVLLVGDAAGYED MLBr_02276|M.leprae_Br4923 SYYTDLRRHEWGFSGQPRAVSSALLPMGGAVSGVAGPNWMLIGDAAACVN MAB_3929|M.abscessus_ATCC_1997 EYYTELRREDFGLTGRLQSIASALLPMGGAVSGVAGPNWMLIGDAAACVN TH_1880|M.thermoresistible__bu RRLKAFAGT--DFGAHTPRWLSRFGDATRLAERYRAGRVFLAGDAAHVHP : : . . . :* **** Mflv_5142|M.gilvum_PYR-GCK ALTGEGLGLAFAAARLLVDSVAADR---------PGDYEARWRRATRRYR Mvan_1194|M.vanbaalenii_PYR-1 ALTGEGLGLSFAAARLLVDSVLADR---------PQDYEARWRGATRRYR MSMEG_0811|M.smegmatis_MC2_155 ALTGEGMGLAFGGAELLVDCVRHNR---------PEEYDRRWLAMTRRYR MUL_0979|M.ulcerans_Agy99 ALTGEGITLAVKQAAAAVRAIADND---------PASYEAAWHRVTRSYR MMAR_4315|M.marinum_M ALTGEGISLAVKQAAAAVRAIADND---------PASYEAAWHRVTRSYR Mb1170c|M.bovis_AF2122/97 ALTGEGISLAVKQAAAAVSAIVDDT---------PASYEAAWHRITRDYR Rv1138c|M.tuberculosis_H37Rv ALTGEGISLAVKQAAAAVSAIVDDT---------PASYEAAWHRITRDYR MAV_1278|M.avium_104 ALTGEGISLAVKQAAAAVRAIVDER---------PASYEAAWHRITRDYR MLBr_02276|M.leprae_Br4923 PLNGEGIDYGLETGRLAAELLDLRDL----SYVWPSLLQQHYGRGFSVAR MAB_3929|M.abscessus_ATCC_1997 PLNGEGIDYGLETGHLAAEVLDAGDY----SQLWPQLLRDRYGRSFSIAR TH_1880|M.thermoresistible__bu PAGGQGLNLGIQDAFNLGWKLAAAVGGWAPDGLLDTYHAERHPVAADVLN . *:*: .. . : . Mflv_5142|M.gilvum_PYR-GCK VMTAGVLR-AGTSPLRSVIVPAACRLPPPAGVSRCGEPAR---------- Mvan_1194|M.vanbaalenii_PYR-1 LMTAGMLR-AGTSPLRSLIVPASSTFP--------GVFSR---------- MSMEG_0811|M.smegmatis_MC2_155 WLTAALLRGSGIRPVRACITPVAAALP--------GVFAR---------- MUL_0979|M.ulcerans_Agy99 WLTRGLVLASAPRPARRAIVPACALLP--------PVFPVWGKYPGKLTA MMAR_4315|M.marinum_M WLTRGLVLASAPRPARRAIVPACALLP--------PVF----RY------ Mb1170c|M.bovis_AF2122/97 LVTRGLVLASTPRAARRAIVPLCALLP--------TAFRY---------- Rv1138c|M.tuberculosis_H37Rv LVTRGLVLASTPRAARRAIVPLCALLP--------TAFRY---------- MAV_1278|M.avium_104 LLTRALVLASTPRAVRRAIVPAGALLP--------GAFRA---------- MLBr_02276|M.leprae_Br4923 RLALLLTFKRCLPAIGPSAMRSTSLITIAVRVMANLVTDD---------- MAB_3929|M.abscessus_ATCC_1997 RLAALLTLPRFLPVMGPVGMHSAVLMRIAVRLMGNLVTDD---------- TH_1880|M.thermoresistible__bu NTRAQMELMSPEPGPRAVRWLLAELMDFEEVNRYLTEKITAIGVRYHTMG : : Mflv_5142|M.gilvum_PYR-GCK ---------------------------------------------RVKRR Mvan_1194|M.vanbaalenii_PYR-1 ---------------------------------------------MVNLL MSMEG_0811|M.smegmatis_MC2_155 ---------------------------------------------AVNAL MUL_0979|M.ulcerans_Agy99 QSGGHQADAAHPGHRLIPAPPKPSLPARIQIGPIPSAAHCQPSAPGVPLL MMAR_4315|M.marinum_M ---------------------------------------------GVNIL Mb1170c|M.bovis_AF2122/97 ---------------------------------------------GVNIL Rv1138c|M.tuberculosis_H37Rv ---------------------------------------------GVNIL MAV_1278|M.avium_104 ---------------------------------------------GVNIL MLBr_02276|M.leprae_Br4923 ---------------------------------------------DADWV MAB_3929|M.abscessus_ATCC_1997 ---------------------------------------------DQDMI TH_1880|M.thermoresistible__bu DGHGLLGRRMRDIPLTGGRLYARMHAGRGVLLDRTGTLSVSGWADRVDHI Mflv_5142|M.gilvum_PYR-GCK RP------------------------------------------- Mvan_1194|M.vanbaalenii_PYR-1 AD------------------------------------------- MSMEG_0811|M.smegmatis_MC2_155 GE------------------------------------------- MUL_0979|M.ulcerans_Agy99 PSAPAAPLPNWPYPPAPPEAAPPPAPPGPPG-------------- MMAR_4315|M.marinum_M AS------------------------------------------- Mb1170c|M.bovis_AF2122/97 AY------------------------------------------- Rv1138c|M.tuberculosis_H37Rv AY------------------------------------------- MAV_1278|M.avium_104 AR------------------------------------------- MLBr_02276|M.leprae_Br4923 ARVWRSGGWASWLVDRRPPFS------------------------ MAB_3929|M.abscessus_ATCC_1997 ARAWRVAGGGSRRLDSRPPFS------------------------ TH_1880|M.thermoresistible__bu VDPGAALDVPAVLLRPDGHVAWVGADHPGQQDLTARLSRWFGAPA