For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTIRYAAPGRINLIGEHTDYNLGWALPIALPQRAVATLVPDHGDALTASSDLMDGAVRIPLDTVPGGVSG WAGYVAGVIWALRCAGHPVSGGAISISSDVEIGSGLSSSAALECAVLGAITSAAGVEIDRIEQARLAQRA ENEYVGAPTGLLDQLAALFGAPATALLIDFRDLSVQAVQFDLDAHGVALLLIDSRARHRHAGGEYAARRA SCERAAKALHAPSLRDVAELSSLTAIGDPIDARHARHVLTENRRVHEFVAALRDCDFTAAGRIFTASHAS MRDDFEITTEHIDLIADAAVRAGALGARMTGGGFGGCVIALVVEAGVEAVIAAVHREVRGAGYPPPAISR AHAAAGAGPLRGNARS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_0692 | galK | - | 100% (366) | galactokinase |
M. ulcerans Agy99 | MUL_3525 | erg12 | 9e-10 | 26.03% (315) | mevalonate kinase, Erg12 |
M. ulcerans Agy99 | MUL_3523 | - | 8e-08 | 25.66% (378) | phosphomevalonate kinase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0636 | galK | 1e-137 | 70.47% (359) | galactokinase |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv0620 | galK | 1e-137 | 69.70% (363) | galactokinase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4638 | - | 1e-68 | 40.93% (364) | galactokinase (GalK) |
M. marinum M | MMAR_0941 | galK | 0.0 | 97.54% (366) | galactokinase, GalK |
M. avium 104 | MAV_4564 | galK | 1e-141 | 71.63% (363) | galactokinase |
M. smegmatis MC2 155 | MSMEG_3692 | galK | 1e-127 | 65.74% (359) | galactokinase |
M. thermoresistible (build 8) | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mb0636|M.bovis_AF2122/97 --MTVSYGAPGRVNLIGEHTDYNLGFALPIALPRRTVVTFTPEHTGAITA Rv0620|M.tuberculosis_H37Rv --MTVSYGAPGRVNLIGEHTDYNLGFALPIALPRRTVVTFTPEHTGAITA MUL_0692|M.ulcerans_Agy99 --MTIRYAAPGRINLIGEHTDYNLGWALPIALPQRAVATLVPDHGDALTA MMAR_0941|M.marinum_M --MTIRYAAPGRINLIGEHTDYNLGWALPIALPQRAVATFVPDHGDALTA MAV_4564|M.avium_104 --MTVRYAAPGRINLIGEHTDYNLGFALPIALPQRTVASFTPADDDAITV MSMEG_3692|M.smegmatis_MC2_155 MGDTVTYAAPGRINLIGEHTDYNLGLALPIALPQRVVVRYQPDDSEAITV MAB_4638|M.abscessus_ATCC_1997 --MTGTWSAPGRVNVIGEHTDYNGGLSLPIAIPQHVDCTLTPRDDQTVRV * :.****:*:******** * :****:*::. * . :: . Mb0636|M.bovis_AF2122/97 RSDRA-DGSARIPLDTTPG-QVTGWAAYAAGAIWALRGAGHPVPGGAMSI Rv0620|M.tuberculosis_H37Rv RSDRA-DGSARIPLDTTPG-QVTGWAAYAAGAIWALRGAGHPVPGGAMSI MUL_0692|M.ulcerans_Agy99 SSDLM-DGAVRIPLDTVPG-GVSGWAGYVAGVIWALRCAGHPVSGGAISI MMAR_0941|M.marinum_M SSDLM-DGAVRIPLDTVPG-GMSGWAGYVAGVIWALRCAGHPVPGGAMSI MAV_4564|M.avium_104 VSDRA-DAPVRIPIDTGPG-DVTGWAAYPAGVMWALRTAGHPVPGGAMSI MSMEG_3692|M.smegmatis_MC2_155 SSAQE-SGDVVVPLDTTPG-DITGWAAYIAGVVWALRDRGHRVEGGRMSI MAB_4638|M.abscessus_ATCC_1997 TSQQHGRDWVEVPLDRLAHTDIVSWARYPLGVVHEFVKRGNDIHGMDLRL * . :*:* . : .** * *.: : *: : * : : Mb0636|M.bovis_AF2122/97 TSDVEIGSGLSSSAALIGAVLGAVGAATGTRIDRLERARLAQRAENDYVG Rv0620|M.tuberculosis_H37Rv TSDVEIGSGLSSSAALIGAVLGAVGAATGTRIDRLERARLAQRAENDYVG MUL_0692|M.ulcerans_Agy99 SSDVEIGSGLSSSAALECAVLGAITSAAGVEIDRIEQARLAQRAENEYVG MMAR_0941|M.marinum_M SSDVEIGSGLSSSAALECAVLGAITSAAGVEIDRIEQARLAQRAENEYVG MAV_4564|M.avium_104 TSDVPMGSGLSSSAALECAVLGAISSAAGIRIDATEQARLAQRAENEYVG MSMEG_3692|M.smegmatis_MC2_155 TSDVEMGSGLASSAALECAVLSALTHGS--DMDRVEQARIAQCAENVYVG MAB_4638|M.abscessus_ATCC_1997 DGDVPVGAGLSSSAAVECAVAAAIRDTFATELSDSELVDITHRAENDFVG .** :*:**:****: ** .*: :. * . ::: *** :** Mb0636|M.bovis_AF2122/97 APTGLLDHLAALFGAPKTALLIDFRDITVRPVAFDPDACDVVLLLMDSRA Rv0620|M.tuberculosis_H37Rv APTGLLDHLAALFGAPKTALLIDFRDITVRPVAFDPDACDVVLLLMDSRA MUL_0692|M.ulcerans_Agy99 APTGLLDQLAALFGAPATALLIDFRDLSVQAVQFDLDAHGVALLLIDSRA MMAR_0941|M.marinum_M APTGLLDQLAALFGAPATALLIDFRDLSLQAVQFDPDAHGVALLLIDSRA MAV_4564|M.avium_104 APTGLLDQLAALYGRPAAAVLIDFADLAVTPVAFDPDAAGVALLLIDSRE MSMEG_3692|M.smegmatis_MC2_155 APTGLMDQLASLFGEPGRAMLIDFRELSVHQVPFTPETAGLTLLVMNSRA MAB_4638|M.abscessus_ATCC_1997 APTGLLDQSASILCTAGHALFLDAETGAHTQVPFDLAAAGLELVVIDTGT *****:*: *:: . *:::* : * * : .: *::::: Mb0636|M.bovis_AF2122/97 RHRHAGGEYALRRASCERAAADLGVSSLRAVQDRGLAALGAIADPIDARR Rv0620|M.tuberculosis_H37Rv RHCHAGGEYALRRASCERAAADLGVSSLRAVQDRGLAALGAIADPIDARR MUL_0692|M.ulcerans_Agy99 RHRHAGGEYAARRASCERAAKALHAPSLRDVAEL--SSLTAIGDPIDARH MMAR_0941|M.marinum_M RHRHAGGEYAARRASCERAAKALHAPSLRDVAEL--SSLTAIGDPTDARR MAV_4564|M.avium_104 RHTHAGGDYAARRLSCERAAADLSASSLRAAADRGCTDLAAVRDPVDARR MSMEG_3692|M.smegmatis_MC2_155 PHRHAAGEYAARRASCERVAAALGVESLREVQDRGLDALDAVTDDEDFRR MAB_4638|M.abscessus_ATCC_1997 RHNHVTSEYATRRQQCQTAASLLEVHSLSAVTDAG--VLDTVADPMLRAR * *. .:** ** .*: .* * . ** . : * :: * : Mb0636|M.bovis_AF2122/97 ARHVLTENQRVLDFAAALADS-DFTAAGQLLTASHESMREDFAITTERID Rv0620|M.tuberculosis_H37Rv ARHVLTENQRVLDFAAALADS-DFTAAGQLLTASHESMREDFAITTERID MUL_0692|M.ulcerans_Agy99 ARHVLTENRRVHEFVAALRDC-DFTAAGRIFTASHASMRDDFEITTEHID MMAR_0941|M.marinum_M ARHVLTENRRVHEFVAALRDC-DFTAAGRIFTASHASMRDDFEITTEHID MAV_4564|M.avium_104 ARHVLTENGRVIDCVAALNNS-DYTEAGRIFTASHASMRDDFGITTERID MSMEG_3692|M.smegmatis_MC2_155 ARHILTENQRVLDVVAALEQS-DFATAGEILTASHASMRDDFEITTAHID MAB_4638|M.abscessus_ATCC_1997 ARHVVTENARVREVVAILQSGRDPRSIGPILTRGHGSLRDDFAVSTPQLD ***::*** ** : .* * . * * ::* .* *:*:** ::* ::* Mb0636|M.bovis_AF2122/97 LIAESAVRAGALGARMTGGGFGGAVIALVPADRARDVADTVRRAAVTAGY Rv0620|M.tuberculosis_H37Rv LIAESAVRAGALGARMTGGGFGGAVIALVPADRARDVADTVRRAAVTAGY MUL_0692|M.ulcerans_Agy99 LIADAAVRAGALGARMTGGGFGGCVIALVVEAGVEAVIAAVHREVRGAGY MMAR_0941|M.marinum_M LIADAAVRAGALGARMTGGGFGGCVIALVAEAGVEAVIAAVHREVRGAGY MAV_4564|M.avium_104 LIADTALRAGALGARMTGGGFGGCVIALAPVQRAEAIGQAVRRAATQAGF MSMEG_3692|M.smegmatis_MC2_155 LIADTAVRAGALGARLTGGGFGGCVIALVPEDLADSVAETVRSTVVAAGH MAB_4638|M.abscessus_ATCC_1997 AAVEASCDSGAHGARMTGGGFGGSVIALAEADSSARIGTAVAQHFSAQHW .::: :** ***:*******.****. : :* Mb0636|M.bovis_AF2122/97 DEPAVSRTYAAPGAAECC----- Rv0620|M.tuberculosis_H37Rv DEPAVSRTYAAPGAAECR----- MUL_0692|M.ulcerans_Agy99 PPPAISRAHAAAGAGPLRGNARS MMAR_0941|M.marinum_M PPPAISRAHAAAGAGPLRGNARS MAV_4564|M.avium_104 AQPVVTRTRAAAGAGPCR----- MSMEG_3692|M.smegmatis_MC2_155 PEPTISRAQAAPGAGIV------ MAB_4638|M.abscessus_ATCC_1997 PIPQVFVVTPSDGARRIR----- * : . .: **