For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTATTPGEATTPEARILVVDDEDNIVELLSVSLKFQGFEVHTATNGAQALDRARETRPDAVILDVMMPGM DGFGVLRRLQADGIDAPALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRAGKGSAEPR NSRLTFADIELDEETHEVWKAGQPVSLSPTEFTLLRYFVINAGTVLSKPKILDHVWRYDFGGDVNVVESY VSYLRRKIDTGDKRLLHTLRGVGYVLREPR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_0463 | phoP | - | 100% (240) | two component system response phosphate regulon transcriptional regulator, PhoP |
M. ulcerans Agy99 | MUL_4391 | tcrX | 3e-67 | 52.89% (225) | two component transcriptional regulatory protein TcrX |
M. ulcerans Agy99 | MUL_4624 | trcR | 3e-59 | 47.09% (223) | two component transcriptional regulator TrcR |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0780 | phoP | 1e-129 | 95.42% (240) | two component system response transcriptional positive |
M. gilvum PYR-GCK | Mflv_1581 | - | 1e-119 | 89.79% (235) | two component transcriptional regulator |
M. tuberculosis H37Rv | Rv0757 | phoP | 1e-129 | 95.42% (240) | two component system response transcriptional positive |
M. leprae Br4923 | MLBr_00174 | - | 3e-55 | 48.00% (225) | putative two-component response regulator |
M. abscessus ATCC 19977 | MAB_0673 | - | 1e-113 | 85.65% (237) | putative DNA-binding response regulator PhoP |
M. marinum M | MMAR_4942 | phoP | 1e-134 | 99.58% (240) | two-component system response phosphate regulon |
M. avium 104 | MAV_0701 | phoP | 1e-126 | 94.17% (240) | DNA-binding response regulator PhoP |
M. smegmatis MC2 155 | MSMEG_5872 | phoP | 1e-120 | 92.14% (229) | DNA-binding response regulator PhoP |
M. thermoresistible (build 8) | TH_1732 | phoP | 2e-58 | 51.11% (225) | DNA-binding response regulator PhoP |
M. vanbaalenii PYR-1 | Mvan_5175 | - | 1e-121 | 90.21% (235) | two component transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1581|M.gilvum_PYR-GCK --------MAMP-VPENVPEARVLVVDDEANIVELLSVSLKFQGFEVHTA Mvan_5175|M.vanbaalenii_PYR-1 ----------MP-VPENVPEARVLVVDDEANIVELLSVSLKFQGFEVHTA MSMEG_5872|M.smegmatis_MC2_155 --------MAMPALPENVPEARVLVVDDEANIVELLSVSLKFQGFEVHTA MUL_0463|M.ulcerans_Agy99 -------MTATTPGEATTPEARILVVDDEDNIVELLSVSLKFQGFEVHTA MMAR_4942|M.marinum_M -------MTATTPGEATTPEARILVVDDEDNIVELLSVSLKFQGFEVHTA Mb0780|M.bovis_AF2122/97 MRKGVDLVTAGTPGENTTPEARVLVVDDEANIVELLSVSLKFQGFEVYTA Rv0757|M.tuberculosis_H37Rv MRKGVDLVTAGTPGENTTPEARVLVVDDEANIVELLSVSLKFQGFEVYTA MAV_0701|M.avium_104 -------MTSATP-TDAKPEARVLVVDDEANIVELLSVSLKFQGFEVHTA MAB_0673|M.abscessus_ATCC_1997 MVSITTETHQGTFSANGTTPAKVLVVDDESNIVELLSVSLKFQGFDVYTA MLBr_00174|M.leprae_Br4923 --------------------MRILAVDDDRAVRESLRRSLSFNGYSVELA TH_1732|M.thermoresistible__bu ------------------VAVRILVVDDDRAVRESLRRSLSFNGYSVELA ::*.***: : * * **.*:*:.* * Mflv_1581|M.gilvum_PYR-GCK SNGPAALDKAREVRPDAIILDVMMPGMDGFGLLRRLRADGIDAPALFLTA Mvan_5175|M.vanbaalenii_PYR-1 SNGPAALDKAREVRPDAIILDVMMPGMDGFGLLRRLRADGIDAPALFLTA MSMEG_5872|M.smegmatis_MC2_155 SNGAAALDKAREVRPDAVILDVMMPGMDGFGLLRRLRADGIDAPALFLTA MUL_0463|M.ulcerans_Agy99 TNGAQALDRARETRPDAVILDVMMPGMDGFGVLRRLQADGIDAPALFLTA MMAR_4942|M.marinum_M TNGAQALDRARETRPDAVILDVMMPGMDGFGVLRRLRADGIDAPALFLTA Mb0780|M.bovis_AF2122/97 TNGAQALDRARETRPDAVILDVMMPGMDGFGVLRRLRADGIDAPALFLTA Rv0757|M.tuberculosis_H37Rv TNGAQALDRARETRPDAVILDVMMPGMDGFGVLRRLRADGIDAPALFLTA MAV_0701|M.avium_104 TNGAQALDRAREARPDAVILDVMMPGMDGFGVLRRLRADGIDAPALFLTA MAB_0673|M.abscessus_ATCC_1997 DSGAAALDLARTVRPDAVILDVMMPGMDGFGVLRRLRADGIDAPTLFLTA MLBr_00174|M.leprae_Br4923 NDGVEALEMVARDRPDALVLDVMMPRLDGLEVCRQLRSTGDDLPILVLTA TH_1732|M.thermoresistible__bu EDGVEALDLIANDRPDAVVLDVMMPRLDGLEVCRQLRSTGDDLPILVLTA .* **: ****::****** :**: : *:*:: * * * *.*** Mflv_1581|M.gilvum_PYR-GCK RDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRSGGRVQEPRTSR Mvan_5175|M.vanbaalenii_PYR-1 RDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRSGRGHEEPRTSR MSMEG_5872|M.smegmatis_MC2_155 RDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRSGRGVEETRNAR MUL_0463|M.ulcerans_Agy99 RDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRAGKGSAEPRNSR MMAR_4942|M.marinum_M RDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRAGKGSAEPRNSR Mb0780|M.bovis_AF2122/97 RDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRAGKGNKEPRNVR Rv0757|M.tuberculosis_H37Rv RDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRAGKGNKEPRNVR MAV_0701|M.avium_104 RDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRAGKGGAEPRSAR MAB_0673|M.abscessus_ATCC_1997 RDGLQDKIAGLTLGADDYVTKPFSLEEVVARLRVILRRSGMGSEPARKSR MLBr_00174|M.leprae_Br4923 RDSVSERVAGLDAGADDYLPKPFALEELLARIRALLRRT-KPDDAAESVA TH_1732|M.thermoresistible__bu RDSVSERVAGLDAGADDYLPKPFALEELLARLRALLRRT-TPDDAADSQK **.:.:::*** *.***:.***:***::**:*.:***: . . Mflv_1581|M.gilvum_PYR-GCK LTFADIELDEDTHEVWKAGEPVSLSPTEFTLLRYFIINAGTVLSKPKILD Mvan_5175|M.vanbaalenii_PYR-1 LTFADIELDEDTHEVWKAGEPVSLSPTEFTLLRYFIINAGTVLSKPKILD MSMEG_5872|M.smegmatis_MC2_155 LTFADIELDEDTHEVWKAGEPVSLSPTEFTLLRYFIINAGTVLSKPKILD MUL_0463|M.ulcerans_Agy99 LTFADIELDEETHEVWKAGQPVSLSPTEFTLLRYFVINAGTVLSKPKILD MMAR_4942|M.marinum_M LTFADIELDEETHEVWKAGQPVSLSPTEFTLLRYFVINAGTVLSKPKILD Mb0780|M.bovis_AF2122/97 LTFADIELDEETHEVWKAGQPVSLSPTEFTLLRYFVINAGTVLSKPKILD Rv0757|M.tuberculosis_H37Rv LTFADIELDEETHEVWKAGQPVSLSPTEFTLLRYFVINAGTVLSKPKILD MAV_0701|M.avium_104 LTFADIELDEETHEVWKAGQPVSLSPTEFTLLRYFVINAGTVLSKPKILD MAB_0673|M.abscessus_ATCC_1997 LSFADIELDEDTHEVWKAGEPVALSPTEFTLLRYFMINAGTVLSKPKILD MLBr_00174|M.leprae_Br4923 MSFSDLTLDPVTREVARGQRWISLTRTEFALLEMLIANPRRVLTRSRILE TH_1732|M.thermoresistible__bu LTFADLTLDPVTREVTRGNRQISLTRTEFALLELLIANPRRVLSRSRILE ::*:*: ** *:** :. . ::*: ***:**. :: *. **::.:**: Mflv_1581|M.gilvum_PYR-GCK HVWRYDFGGDVNVVESYVSYLRRKIDT-GDKRLLHTLRGVGYVLREPR- Mvan_5175|M.vanbaalenii_PYR-1 HVWRYDFGGDVNVVESYVSYLRRKIDT-GDKRLLHTLRGVGYVLREPR- MSMEG_5872|M.smegmatis_MC2_155 HVWRYDFGGDVNVVESYVSYLRRKIDT-GEKRLLHTLRGVGYVLREPR- MUL_0463|M.ulcerans_Agy99 HVWRYDFGGDVNVVESYVSYLRRKIDT-GDKRLLHTLRGVGYVLREPR- MMAR_4942|M.marinum_M HVWRYDFGGDVNVVESYVSYLRRKIDT-GDKRLLHTLRGVGYVLREPR- Mb0780|M.bovis_AF2122/97 HVWRYDFGGDVNVVESYVSYLRRKIDT-GEKRLLHTLRGVGYVLREPR- Rv0757|M.tuberculosis_H37Rv HVWRYDFGGDVNVVESYVSYLRRKIDT-GEKRLLHTLRGVGYVLREPR- MAV_0701|M.avium_104 HVWRYDFGGDVNVVESYVSYLRRKIDT-GEKRLLHTLRGVGYVLREPR- MAB_0673|M.abscessus_ATCC_1997 HVWRYDFGGDVNVVESYVSYLRRKIDN-GEKRLLHTLRGVGYVLREPR- MLBr_00174|M.leprae_Br4923 EVWGFDFPTSGNALEVYVGYLRRKTEADGESRLIHTVRGVGYVLRETPP TH_1732|M.thermoresistible__bu EVWGFDFPTSGNALEVYIGYLRRKTEAEGEPRLIHTVRGVGYVLRETPP .** :** . *.:* *:.***** : *: **:**:*********.