For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
QAGQRRGRWTGVPLEDRHAVRRDTLIAAGVQLLGEEAGPALTVRAVCRQAALTERYFYESFSDRDHFVRA VYDDVCTRAMATLMSANTPRDAVERFVALMVDDPVRGRVLLLAPAVEPVLTRSGADWMPNFIDLLQRKLS QIADPVLQKLVATSLIGALTGLFTAYLNGQLGATRQQFIDYCVDLLLGTAAAYAPHRDRGEAEHPVAARQ HD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_0446 | - | - | 100% (213) | hypothetical protein MUL_0446 |
M. ulcerans Agy99 | MUL_1200 | - | 8e-17 | 31.44% (194) | TetR family transcriptional regulator |
M. ulcerans Agy99 | MUL_4890 | - | 1e-06 | 33.04% (112) | transcriptional regulatory protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0848c | - | 1e-100 | 82.16% (213) | hypothetical protein Mb0848c |
M. gilvum PYR-GCK | Mflv_1669 | - | 4e-75 | 70.68% (191) | TetR family transcriptional regulator |
M. tuberculosis H37Rv | Rv0825c | - | 1e-100 | 82.16% (213) | hypothetical protein Rv0825c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0756c | - | 2e-55 | 55.17% (203) | hypothetical protein MAB_0756c |
M. marinum M | MMAR_4855 | - | 1e-119 | 99.53% (213) | hypothetical protein MMAR_4855 |
M. avium 104 | MAV_0773 | - | 2e-81 | 77.60% (192) | hypothetical protein MAV_0773 |
M. smegmatis MC2 155 | MSMEG_5768 | - | 3e-81 | 75.26% (194) | hypothetical protein MSMEG_5768 |
M. thermoresistible (build 8) | TH_1575 | - | 4e-80 | 79.12% (182) | CONSERVED HYPOTHETICAL PROTEIN |
M. vanbaalenii PYR-1 | Mvan_5084 | - | 1e-78 | 72.77% (191) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MUL_0446|M.ulcerans_Agy99 MQAGQRRGR-WTGVPLEDRHAVRRDTLIAAGVQLLGEEAGPALTVRAVCR MMAR_4855|M.marinum_M MQAGQRRGR-WTGVPLEDRHAVRRDTLIAAGVQLLGEEAGPALTVRAVCR Mb0848c|M.bovis_AF2122/97 MQTGQNRGR-WSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCR Rv0825c|M.tuberculosis_H37Rv MQTGQNRGR-WSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCR MAV_0773|M.avium_104 -------------MPLESRLALRRDNLINAGVQLLGGSGGPALTVRAVCR Mflv_1669|M.gilvum_PYR-GCK MPSGQRRGR-WSGVPLQDRQALRRDELITAGIGLLGSSGGPNLTVRAVCK Mvan_5084|M.vanbaalenii_PYR-1 MPSGQRRGR-WSGVPLQDRQALRRDELITAGISLLGSPGGPHLTVRAVCK TH_1575|M.thermoresistible__bu -------------VPLSDRQTLRREELIAAGVKLLGHREGPALTVRAVCR MSMEG_5768|M.smegmatis_MC2_155 MPSGQRRGR-WSGVPLRERTALRRDELIAAGVKLLGAADGPALTVRAVCR MAB_0756c|M.abscessus_ATCC_199 MANGQAQRRSWAGVSPAERADERRRELMAAGVRLLGLRPRPAVTVRAVCR :. .* ** *: **: *** * :******: MUL_0446|M.ulcerans_Agy99 QAALTERYFYESFSDRDHFVRAVYDDVCTRAMATLMSANTPRDAVERFVA MMAR_4855|M.marinum_M QAALTERYFYESFSDRDHFVRAVYDDVCTRAMATLMSANTPRDAVERFVA Mb0848c|M.bovis_AF2122/97 HAGLTERYFYESFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVE Rv0825c|M.tuberculosis_H37Rv HAGLTERYFYESFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVE MAV_0773|M.avium_104 KAALTERYFYESFTDRDEFVRAVYDDVCTRAMNTLTSATTPREAVERFVE Mflv_1669|M.gilvum_PYR-GCK AAGLTERYFYESFTDRDEYVAAVYDDVCTAAMATLRESESMRDAVERFVA Mvan_5084|M.vanbaalenii_PYR-1 AAGLTERYFYESFTDRDEYVAAVYDNVCTAAMSTLMKSDSMRDAVERFVA TH_1575|M.thermoresistible__bu EAGLTERYFYESFADRDEFVRAVYDDVCARAMSTLMTADTPRDAVERFVA MSMEG_5768|M.smegmatis_MC2_155 EAGLTERYFYECFNDRDGFVRAVYDDVCATAMSALTAADTPRKAVEQFVS MAB_0756c|M.abscessus_ATCC_199 SAGMTERYFYEHFSDRDTFVRAVYDHVGFRAIEALSGVRSAYEGVDAFAR *.:******* * **: :* ****.* *: :* : ..*: *. MUL_0446|M.ulcerans_Agy99 LMVDDPVRGRVLLLAPAVEPVLTRSGADWMPNFIDLLQRKLSQ-IADPVL MMAR_4855|M.marinum_M LMVDDPVRGRVLLLAPAVEPVLTRSGADWMPNFIDLLQRKLSQ-IADPVL Mb0848c|M.bovis_AF2122/97 LMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIELLQRKLSR-IVDPVL Rv0825c|M.tuberculosis_H37Rv LMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIELLQRKLSR-IVDPVL MAV_0773|M.avium_104 LMVDDPVRGRVLLLAPAVEPVLTRSGAEWMPNFIDLLQRKLSR-IGDAVL Mflv_1669|M.gilvum_PYR-GCK LMIDDPARGRVLLLAPEAEPVLARSGARWMPNFIELLQHNLTR-ITDTTT Mvan_5084|M.vanbaalenii_PYR-1 LMIDDPARGRVLLLAPEVEPVLARSGARWMPNFIDLLQRNLTQ-ISDPTT TH_1575|M.thermoresistible__bu LMVDDPVRGRVLLLAPEVEPVLTRSGAKWMPNFIDLLQRKLTR-ITDPAL MSMEG_5768|M.smegmatis_MC2_155 LMVDDPTRGRVLLLAPESEPVLTRSGAEWMPNFIDLLQRKLTR-IADPVR MAB_0756c|M.abscessus_ATCC_199 LMVDEPTMGRVLLIAPTFEPTLSESGYDWLPRFVALLQGKLSTNLADEVQ **:*:*. *****:** **.*:.** *:*.*: *** :*: : * . MUL_0446|M.ulcerans_Agy99 QKLVATSLIGALTGLFTAYLNGQLGATRQQFIDYCVDLLLGTAAAYAPHR MMAR_4855|M.marinum_M QKLVATSLIGALTGLFTAYLNGQLGATRQQFIDYCVDLLLGTAAAYAPHR Mb0848c|M.bovis_AF2122/97 QKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATYAPHR Rv0825c|M.tuberculosis_H37Rv QKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATYAPHR MAV_0773|M.avium_104 QKMIATSLVGGLSSLFTAYLHGQLGATRKQFIDYCTNMLYITAAPYVSAG Mflv_1669|M.gilvum_PYR-GCK QAMVATGLIGALTALFTAYLDGRLEATREQFIDHCAELLLSRAVT----- Mvan_5084|M.vanbaalenii_PYR-1 QAMVATGLIGALTALFTAYLDGRLGATRERFIDHCAELLLSRAVT----- TH_1575|M.thermoresistible__bu QAMVATGLIGALTALFTAYLDGRLAATREQFIDYCVGILLNPVASY---- MSMEG_5768|M.smegmatis_MC2_155 QAMVATSLIGALTALFTAYLNDRLPATREQFIDFCVDMLLGRVGSF---- MAB_0756c|M.abscessus_ATCC_199 QQLVATSLVGALTSLFTAYLNEELNVDRQRFVDYCVQILLQGANASVTPR * ::**.*:*.*:.******. .* . *::*:*.*. :* . . MUL_0446|M.ulcerans_Agy99 DRGEAEHPVAARQHD MMAR_4855|M.marinum_M DRGEAERPVAARQHD Mb0848c|M.bovis_AF2122/97 ERGESEHSIPAGPHN Rv0825c|M.tuberculosis_H37Rv ERGESEHSIPAGPHN MAV_0773|M.avium_104 ELGKSQ--------- Mflv_1669|M.gilvum_PYR-GCK --------------- Mvan_5084|M.vanbaalenii_PYR-1 --------------- TH_1575|M.thermoresistible__bu --------------- MSMEG_5768|M.smegmatis_MC2_155 --------------- MAB_0756c|M.abscessus_ATCC_199 PTSPSPQQPS-----