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AQGTVKWFNGEKGFGFITPDDGTKDLFVHYSEIQCSGYRSLEENQRVQFEVEQGTKGPQAVGVSAV*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_0392 | cspA | - | 100% (67) | cold shock protein a, CspA |
| M. ulcerans Agy99 | MUL_4224 | cspA_1 | 1e-24 | 68.66% (67) | cold shock protein A CspA_1 |
| M. ulcerans Agy99 | MUL_0279 | cspB | 2e-09 | 39.34% (61) | cold shock-like protein B CspB |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3672c | cspA | 6e-24 | 65.67% (67) | cold shock protein A |
| M. gilvum PYR-GCK | Mflv_5230 | - | 3e-30 | 85.07% (67) | cold-shock DNA-binding domain-containing protein |
| M. tuberculosis H37Rv | Rv3648c | cspA | 6e-24 | 65.67% (67) | cold shock protein A |
| M. leprae Br4923 | MLBr_00198 | cspA | 5e-25 | 68.66% (67) | putative cold shock protein |
| M. abscessus ATCC 19977 | MAB_0487 | - | 3e-25 | 71.64% (67) | cold shock protein A (CspA) |
| M. marinum M | MMAR_4823 | cspA | 2e-34 | 98.51% (67) | cold shock protein a, CspA |
| M. avium 104 | MAV_0852 | - | 9e-33 | 92.54% (67) | hypothetical protein MAV_0852 |
| M. smegmatis MC2 155 | MSMEG_0559 | - | 3e-28 | 80.60% (67) | hypothetical protein MSMEG_0559 |
| M. thermoresistible (build 8) | TH_0855 | - | 3e-23 | 70.97% (62) | PROBABLE COLD SHOCK PROTEIN A CSPA |
| M. vanbaalenii PYR-1 | Mvan_1040 | - | 6e-28 | 80.60% (67) | cold-shock DNA-binding domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
MUL_0392|M.ulcerans_Agy99 MAQGTVKWFNGEKGFGFITPDDGTKDLFVHYSEIQCSGYRSLEENQRVQF
MMAR_4823|M.marinum_M MAQGTVKWFNGEKGFGFITPDDGTKDLFVHYSEIQGSGYRSLEENQRVQF
MAV_0852|M.avium_104 MAQGTVKWFNGEKGFGFITPDDGTKDLFVHYSEIQGSGYRSLDENQRVQF
MSMEG_0559|M.smegmatis_MC2_155 MAQGTVKWFNGEKGFGFIAPDGGAPDVFVHYSEISGSGFRSLEENQRVEF
Mvan_1040|M.vanbaalenii_PYR-1 MAQGTVKWFNGDKGFGFIAPDGGAPDVFVHYSEISGNGYRSLEENQRVEF
Mflv_5230|M.gilvum_PYR-GCK MAQGTVKWFNGEKGFGFIAPDDGSKDVFVHYSEISGSGYRSLEENQRVEF
Mb3672c|M.bovis_AF2122/97 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEF
Rv3648c|M.tuberculosis_H37Rv MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEF
MLBr_00198|M.leprae_Br4923 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEF
MAB_0487|M.abscessus_ATCC_1997 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGNGFRTLEENQKVEF
TH_0855|M.thermoresistible__bu -----VKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQRVEF
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MUL_0392|M.ulcerans_Agy99 EVEQGTKGPQAVGVSAV
MMAR_4823|M.marinum_M EVEQGTKGPQAVGVSAV
MAV_0852|M.avium_104 DVEQGAKGPQAVGVSTV
MSMEG_0559|M.smegmatis_MC2_155 EITQGAKGPQAVGVTAV
Mvan_1040|M.vanbaalenii_PYR-1 EVEQGNKGPQAVRVTAV
Mflv_5230|M.gilvum_PYR-GCK EVEQGNKGPQAVRVNAI
Mb3672c|M.bovis_AF2122/97 EIGHSPKGPQATGVRSL
Rv3648c|M.tuberculosis_H37Rv EIGHSPKGPQATGVRSL
MLBr_00198|M.leprae_Br4923 EIGHSPKGPQATGVRSV
MAB_0487|M.abscessus_ATCC_1997 EVGQSPKGPQATGVRAV
TH_0855|M.thermoresistible__bu EVGQSPKGPQATGVRSI
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