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M. smegmatis MC2 155 MSMEG_6880 (-)

QWRMSKKGRAMLKRKGAIGVVASAAMLLTACSGGGGGDAADGDVIKFGWLNGITGDYSSYYEPSQAAVTI
AIDEINEAGGVLGKKVELVSADNLSTVEGAVQGFSRLVDVENVVAVGGVESTGGLAILDSANELEIPVFC
PGCGTPELDTGAGEFMFRLTGSDSDGGTIAAQFARDENIKRVAVMAQNTEGMSEPADIFKKVFVEGAGGE
VVADVRFNPGRSSYQAELAQAFDAKPEAVYLAAGHEAASVIFREWQRRGYGGKFFVSPDLVTPPISALMP
DLENGVAVGAIAAYDTESPAYKVFADKFQAKTGNPPAAGVYDANQYDQYIALALAITKAQSTDGAAIAEA
IPQVLNSGGVEVYSYTDGLKELEAGNEINYHGASGSLDLNEHNNLAAPLFGEQFIIDRAWTQVDVIELDP
ALRKLVGD*

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_6880	-	-	100% (429)	hydrophobic amino acid ABC transporter, putative
M. smegmatis MC2 155	MSMEG_2982	-	2e-14	25.67% (374)	putative periplasmic binding protein
M. smegmatis MC2 155	MSMEG_1216	-	2e-08	25.84% (356)	ABC-type transport system periplasmic substrate-binding protein

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	Mflv_1687	-	6e-13	20.10% (388)	extracellular ligand-binding receptor
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	-	-	-	-	-
M. abscessus ATCC 19977	-	-	-	-	-
M. marinum M	-	-	-	-	-
M. avium 104	-	-	-	-	-
M. thermoresistible (build 8)	TH_2887	-	9e-11	24.09% (357)	PUTATIVE Extracellular ligand-binding receptor
M. ulcerans Agy99	-	-	-	-	-
M. vanbaalenii PYR-1	Mvan_2596	-	2e-12	24.41% (381)	extracellular ligand-binding receptor

CLUSTAL 2.0.9 multiple sequence alignment


TH_2887|M.thermoresistible__bu      --MRGPRRSRFNTSALRAGAVVFAAGLVLAGCGSRAGDAPSS-GAASCVD
Mvan_2596|M.vanbaalenii_PYR-1       ---------------------MAAASLLLAGCGSKASETDSA-NAESCVD
Mflv_1687|M.gilvum_PYR-GCK          --MKRTRP---------TLALLAAVAVLTVGCGSRAGDEAAAPAAESCVD
MSMEG_6880|M.smegmatis_MC2_155      MQWRMSKKGRAMLKRKGAIGVVASAAMLLTACSGGGGGDAAD--------
                                                         : :..:: ..*.. ..   :         

TH_2887|M.thermoresistible__bu      TSGPTIKVGSLNSLSGTMAISEVTVRDAIKLAVDEINADGGVLGKQIELI
Mvan_2596|M.vanbaalenii_PYR-1       TSGSTIKVGALNSLSGTMAISEVTVRNAIDLAVEQINASGGVMGKQIQLV
Mflv_1687|M.gilvum_PYR-GCK          TTGDTVKVGAINSLSGGLAVSETVIRDAITLAVEQVNAGGGVLGKQLTLI
MSMEG_6880|M.smegmatis_MC2_155      --GDVIKFGWLNGITGDYSSYYEPSQAAVTIAIDEINEAGGVLGKKVELV
                                      * .:*.* :*.::*  :      : *: :*::::*  ***:**:: *:

TH_2887|M.thermoresistible__bu      GEDGASEPTVFAEKAEKLISSDCVAAVFGGWTSSSRKAMLPVFESNNALL
Mvan_2596|M.vanbaalenii_PYR-1       GEDGASEPTVFAEKAEKLISSDCVAAVFGGWTSSSRKAMLPVFESANSLL
Mflv_1687|M.gilvum_PYR-GCK          GEDGASEPTIFAEKAQKLVQSDCVAAVFGGYTSASRKAMLPVFEDNNALL
MSMEG_6880|M.smegmatis_MC2_155      SADNLSTVEGAVQGFSRLVDVENVVAVGGVESTGGLAILDSANELEIPVF
                                    . *. *     .:  .:*:. : *.** *  ::..   : .. *   .::

TH_2887|M.thermoresistible__bu      YYPVQYEGLESSP--NIFYTGATTNQQIVPALDYLKEQGVTSLYLVGS-D
Mvan_2596|M.vanbaalenii_PYR-1       YYPVQYEGLESSP--NIFYTGATTNQQIVPALDYLKEKGIKSLYLVGS-D
Mflv_1687|M.gilvum_PYR-GCK          YYGQQYEGLESSP--NIFYTGATTNQQIIPALDYLKEQGVKSLYLVGS-D
MSMEG_6880|M.smegmatis_MC2_155      CPGCGTPELDTGAGEFMFRLTGSDSDGGTIAAQFARDENIKRVAVMAQNT
                                            *::..   :*   .: .:    * :: :::.:. : ::..  

TH_2887|M.thermoresistible__bu      YVFPQTANRIIKAYAPANGIEIKGEDYTPLGSTDFSTIVNKIRTADADAV
Mvan_2596|M.vanbaalenii_PYR-1       YVFPQTANRIIKAYAAANGIEIKGEDYTPLGSTDFSTIVNKVRTADADAV
Mflv_1687|M.gilvum_PYR-GCK          YVFPRTSNAIVKAYAQANGIEIKGEDYTPLGSTDFSTIVNKIRTADADAI
MSMEG_6880|M.smegmatis_MC2_155      EGMSEPADIFKKVFVEGAGGEVVADVRFNPGRSSYQAELAQAFDAKPEAV
                                      :...:: : *.:. . * *: .:     * :.:.: : :   *..:*:

TH_2887|M.thermoresistible__bu      FNTLNGDSNVAFFREYRNVGLTAQEMPVVSVSIAEEEIGGIGVQNIEGQL
Mvan_2596|M.vanbaalenii_PYR-1       FNTLNGDSNVAFFREYRNVGLTPQDMPVVSVSIAEEEVGGIGVQNITGQL
Mflv_1687|M.gilvum_PYR-GCK          FNVVVGDSLNAFFREYRSAGLTAEEMPVMSMCVGEEEVRSIGAPTLVGQL
MSMEG_6880|M.smegmatis_MC2_155      YLAAGHEAASVIFREWQRRGYGGKFF--VSPDLVTPPISALMPDLENGVA
                                    : .   ::  .:***::  *   : :  :*  :    : .:      *  

TH_2887|M.thermoresistible__bu      TAWNYYQTVDNPVNKAFVPAYKDEFGAAKPTSDPMEAAYVSVYLWKNTVE
Mvan_2596|M.vanbaalenii_PYR-1       TAWNYYQTIDTPVNNEFVKAYKDKYGADKPTSDPMEAAYVSVYLWKNTVE
Mflv_1687|M.gilvum_PYR-GCK          SSWNYYQTLDSPANTTFVEDFKARFGADRVTSDPMESAYAAVLLWKATVE
MSMEG_6880|M.smegmatis_MC2_155      VGAIAAYDTESPAYKVFADKFQAKTGNPPAAGVYDANQYDQYIALALAIT
                                     .       :.*. . *.  :: . *    :.      *        :: 

TH_2887|M.thermoresistible__bu      KANSFDVDAIQENADGVSFDAPEGTVTIDGETHHITKTARIGEIRPDGLI
Mvan_2596|M.vanbaalenii_PYR-1       KAQSFDVKAIQDNAGGVTFDAPEGLVTIDGENHHITKTARIGEIRPDGLI
Mflv_1687|M.gilvum_PYR-GCK          KANSFAVPDIQEAAGGVTVDVPEGTMTLDGENHHVTKTARIGRVADDGLI
MSMEG_6880|M.smegmatis_MC2_155      KAQSTDGAAIAEAIPQVLNSGGVEVYSYTDGLKELEAGNEINYHGASGSL
                                    **:*     * :    *  .      :  .  :.:    .*.    .* :

TH_2887|M.thermoresistible__bu      YTVWES--PAPIEPDPYLKSYPWAAG-----------LAS-
Mvan_2596|M.vanbaalenii_PYR-1       YTVWES--PGPIEPDPYLKSYEWAAG-----------LSG-
Mflv_1687|M.gilvum_PYR-GCK          YQVWQS--PAPIEPDPYLKDYPWAAG-----------ITG-
MSMEG_6880|M.smegmatis_MC2_155      DLNEHNNLAAPLFGEQFIIDRAWTQVDVIELDPALRKLVGD
                                        ..  ..*:  : :: .  *:             : .