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M. smegmatis MC2 155 MSMEG_1216 (-)

annotation: ABC-type transport system periplasmic substrate-binding protein
coordinates: 1285707 - 1287002
length: 431 

IMSNYIPRRVFLARAGLLAGGVVAAPSLLAACGGDTGGGGGGGASDTFKVGAVLELSGESATGGQIAQRG
YQLWADTVNSKGGLQIGDQKYNVELIVQDCKSDPGTGADAASRLATEEGVNAMFGAYTSGVQLAMDPICA
KYRIPCIAGSAESPNVWKNQPAFTYGVIPAVDTTAARAMQSIVDTANPKPVTAAVVGANEPFSDNTAEGF
RAGAEAANLNVVHYSLFPPNADLAPVAQVVAAQRPDIVAVGGHDVLLVDFVRAMGATGYTPKAIIEHYGI
TDASFSQALGRQADGVMGISVWLPNAAFSDDLFGSAADYAKAFEDKYGSPPDYTAAGCSAAGRVLQAAVE
KLGESPSLSEDARGKLNDLIAQTDMETFYGPIKFATEGDHFHNNTALDPMLVQIQDGQVKAIAPPDSAQA
QIIYPLPPLT*

Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_1216--100% (431)ABC-type transport system periplasmic substrate-binding protein
M. smegmatis MC2 155MSMEG_2982-4e-1325.63% (277) putative periplasmic binding protein
M. smegmatis MC2 155MSMEG_6880-2e-0825.84% (356) hydrophobic amino acid ABC transporter, putative

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_3798-5e-1223.60% (322) extracellular ligand-binding receptor
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. marinum M-----
M. avium 104-----
M. thermoresistible (build 8)TH_2887-2e-1431.22% (189) PUTATIVE Extracellular ligand-binding receptor
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_2596-6e-1223.53% (323) extracellular ligand-binding receptor

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_3798|M.gilvum_PYR-GCK          -------------------MAVASLLLAGCGSKASETDSANAESCVDTSG
Mvan_2596|M.vanbaalenii_PYR-1       -------------------MAAASLLLAGCGSKASETDSANAESCVDTSG
TH_2887|M.thermoresistible__bu      MRGPRRSRFNTSALRAGAVVFAAGLVLAGCGSRAGDAPSSGAASCVDTSG
MSMEG_1216|M.smegmatis_MC2_155      -------MIMSNYIPRRVFLARAGLLAGGVVAAPSLLAACGGDTGGGGGG
                                                       :  *.*: .*  : ..   :... :  . .*

Mflv_3798|M.gilvum_PYR-GCK          ---SSIKVGALNSLSGTMAISEVTVRNAIDLAVEQINASGGVLG----KQ
Mvan_2596|M.vanbaalenii_PYR-1       ---STIKVGALNSLSGTMAISEVTVRNAIDLAVEQINASGGVMG----KQ
TH_2887|M.thermoresistible__bu      ---PTIKVGSLNSLSGTMAISEVTVRDAIKLAVDEINADGGVLG----KQ
MSMEG_1216|M.smegmatis_MC2_155      GASDTFKVGAVLELSGESATGGQIAQRGYQLWADTVNSKGGLQIGDQKYN
                                        ::***:: .***  * .   .: . .* .: :*:.**:       :

Mflv_3798|M.gilvum_PYR-GCK          IQLVSEDGASEPTVFAEKAEKLISSDCVAAVFGGWTSSSRKAMLPVFESA
Mvan_2596|M.vanbaalenii_PYR-1       IQLVGEDGASEPTVFAEKAEKLISSDCVAAVFGGWTSSSRKAMLPVFESA
TH_2887|M.thermoresistible__bu      IELIGEDGASEPTVFAEKAEKLISSDCVAAVFGGWTSSSRKAMLPVFESN
MSMEG_1216|M.smegmatis_MC2_155      VELIVQDCKSDPGTGADAASRLATEEGVNAMFGAYTSGVQLAMDPICAK-
                                    ::*: :*  *:* . *: *.:* :.: * *:**.:**. : ** *:  . 

Mflv_3798|M.gilvum_PYR-GCK          NSLLYYPVQYEGLESSPNIFYTGATTNQQIVPALDYLKEKGVTSLY----
Mvan_2596|M.vanbaalenii_PYR-1       NSLLYYPVQYEGLESSPNIFYTGATTNQQIVPALDYLKEKGIKSLY----
TH_2887|M.thermoresistible__bu      NALLYYPVQYEGLESSPNIFYTGATTNQQIVPALDYLKEQGVTSLY----
MSMEG_1216|M.smegmatis_MC2_155      ----YRIPCIAGSAESPNVWKNQPAFTYGVIPAVDTTAARAMQSIVDTAN
                                        *      *  .***:: . .: .  ::**:*    :.: *:     

Mflv_3798|M.gilvum_PYR-GCK          -------LVGSDYVFPQTANRIIKAYAEANGIEIKGEDYTPLGSTDFSTI
Mvan_2596|M.vanbaalenii_PYR-1       -------LVGSDYVFPQTANRIIKAYAAANGIEIKGEDYTPLGSTDFSTI
TH_2887|M.thermoresistible__bu      -------LVGSDYVFPQTANRIIKAYAPANGIEIKGEDYTPLGSTDFSTI
MSMEG_1216|M.smegmatis_MC2_155      PKPVTAAVVGANEPFSDNTAEGFRAGAEAANLNVVHYSLFPP-NADLAPV
                                           :**::  *.:.: . ::* * * .:::   .  *  .:*::.:

Mflv_3798|M.gilvum_PYR-GCK          INKVRSADADAVFNTLNGDSNVAFFREYKNVGLTPQDMPVVSVSIAEEEV
Mvan_2596|M.vanbaalenii_PYR-1       VNKVRTADADAVFNTLNGDSNVAFFREYRNVGLTPQDMPVVSVSIAEEEV
TH_2887|M.thermoresistible__bu      VNKIRTADADAVFNTLNGDSNVAFFREYRNVGLTAQEMPVVSVSIAEEEI
MSMEG_1216|M.smegmatis_MC2_155      AQVVAAQRPDIVAVGGHDVLLVDFVRAMGATGYTPKAIIEHYGITDASFS
                                     : : :  .* *    :.   * *.*    .* *.: :         .  

Mflv_3798|M.gilvum_PYR-GCK          GGIG-VQNIDGQLTAWDYYQTIDTPVN---NEFVKAYKDKFGADKPTSDP
Mvan_2596|M.vanbaalenii_PYR-1       GGIG-VQNITGQLTAWNYYQTIDTPVN---NEFVKAYKDKYGADKPTSDP
TH_2887|M.thermoresistible__bu      GGIG-VQNIEGQLTAWNYYQTVDNPVN---KAFVPAYKDEFGAAKPTSDP
MSMEG_1216|M.smegmatis_MC2_155      QALGRQADGVMGISVWLPNAAFSDDLFGSAADYAKAFEDKYGS--PPDYT
                                     .:*   :    ::.*    :..  :      :. *::*::*:  *.. .

Mflv_3798|M.gilvum_PYR-GCK          MEAAYVSVYLWKNTVEKAQSFDVKAIQDNADGVTFDAPEGLVTIDGDNHH
Mvan_2596|M.vanbaalenii_PYR-1       MEAAYVSVYLWKNTVEKAQSFDVKAIQDNAGGVTFDAPEGLVTIDGENHH
TH_2887|M.thermoresistible__bu      MEAAYVSVYLWKNTVEKANSFDVDAIQENADGVSFDAPEGTVTIDGETHH
MSMEG_1216|M.smegmatis_MC2_155      AAGCSAAGRVLQAAVEKLGESPSLSEDARGKLNDLIAQTDMETFYGPIKF
                                      .. .:  : : :***  .    : : ..    : *  .  *: *  :.

Mflv_3798|M.gilvum_PYR-GCK          ITKTARIG-EIRPDGLIYTVWESPAPIEPDPFLKSYPWAAGLSG--
Mvan_2596|M.vanbaalenii_PYR-1       ITKTARIG-EIRPDGLIYTVWESPGPIEPDPYLKSYEWAAGLSG--
TH_2887|M.thermoresistible__bu      ITKTARIG-EIRPDGLIYTVWESPAPIEPDPYLKSYPWAAGLAS--
MSMEG_1216|M.smegmatis_MC2_155      ATEGDHFHNNTALDPMLVQIQDGQVKAIAPPDSAQAQIIYPLPPLT
                                     *:  ::  :   * ::  : :.     . *   .      *.