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M. smegmatis MC2 155 MSMEG_6654 (-)

annotation: TnpC protein
coordinates: 6708371 - 6709774
length: 467

VKVSHNFMAASAVFDDEHLVSCAGLVPVMTLASQTGLSDLIADKVEIVEPRIKSGSANPSPKLTTVIAGM
CAGADSIDDLDLVRSGGMKALFGGVYAPSTIGTLLREFTFGHARQLEAVLREHLGGLCERVALLPGADTQ
AFVDIDSLLRPVYGHAKQGASYGHTKIAGKQILRKGLSPLITTISTTTGAPMITGARLRAGKTNSGKGAA
RMIAQAVTTARAAGVNGQILVRGDSAYGNSTVVNACRRAGAHFSLVLTKTRAVAAAIEAISDNAWTPVNY
PGAVRDPDTGAWISDAEVAETTYTAFSSTNTPVTARLIVRRVKDARYLDALFPVWRYHPFFTDSDEPVDA
ADITHRRHAIIETVFADLIDGPLAHMPSGRFGANSAWILCAAIAHNLLRAAGVLAGGAHALARGATLRRK
IVNIPARLARPQRRPILHLPSHWPWAQQWLTLWRNTIGYSPPTAATH
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_6654--100% (467)TnpC protein
M. smegmatis MC2 155MSMEG_4127-0.086.51% (467) TnpC protein
M. smegmatis MC2 155MSMEG_1591-0.080.26% (466) TnpC protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_4617-1e-12879.73% (291) TnpC protein
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. marinum MMMAR_3317-1e-1925.69% (471) transposase for ISMyma07
M. avium 104MAV_1481-0.081.36% (397) TnpC protein
M. thermoresistible (build 8)TH_0489-0.074.89% (450) TnpC protein
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_5550-0.089.08% (467) transposase, IS4 family protein

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_6654|M.smegmatis_MC2_155      ---------------MKVSHNFMAASAVFDDEHLVSCAGLVPVMTLASQT
Mvan_5550|M.vanbaalenii_PYR-1       MFSTHLSTQLRKALPVQVSHKFAASSAVFDDDHLVSCAGLVPVMTLAAQT
MAV_1481|M.avium_104                --------------------------------------------------
TH_0489|M.thermoresistible__bu      ---------------------------VFDDDNLVSCAGLVPVMGQAEQT
Mflv_4617|M.gilvum_PYR-GCK          MFSTHLSAQLGKALPVQVSHRFAASSAVFDDERLVSCAGLVPVMALAEQT
MMAR_3317|M.marinum_M               ---------------MESSAAVSRVKVSAGGRGVVSHAGMGLLRELADLT
                                                                                      

MSMEG_6654|M.smegmatis_MC2_155      GLSDLIADKVEIVEPRIKSGSANPSPKLTTVIAGMCAGADSIDDLDLVRS
Mvan_5550|M.vanbaalenii_PYR-1       GLAQLLAAKVRITEPRIKSGSANPAPKLTTVVAGMCAGADCIDDLDLVRS
MAV_1481|M.avium_104                ----------------------------------MCVGADSIDDLDLVRA
TH_0489|M.thermoresistible__bu      GLSDLLAQHVHITETRIKSGAANLAPKLATVIAAMCAGADCIDDVDVLRS
Mflv_4617|M.gilvum_PYR-GCK          GLSSSLADKVRFSCERVKSGAANPSPKLTTLIAGMCTGADSIDDLDVVRS
MMAR_3317|M.marinum_M               GLSAQVTAAP--ADTYRGPWVYAPGDIFADLAAAVADGADCIDGVGQL-C
                                                                      :. ***.**.:. : .

MSMEG_6654|M.smegmatis_MC2_155      GGMKALFGGVYAPSTIGTLLREFTFGHARQLEAVLREHLGGLCERVALLP
Mvan_5550|M.vanbaalenii_PYR-1       GGMKTLFDGVYAPSTIGTLLREFTFGHARQLESVLREHLAGLCERVQLLP
MAV_1481|M.avium_104                GGMKSLFGGVYAASTVGTLLREFTFGHARQLESVLRHHLSHLCQRVDLLP
TH_0489|M.thermoresistible__bu      GGMKTLFDNVYAPSTIGTLLREFTFGHNRQLESVLRHHLSALCGHVDLLP
Mflv_4617|M.gilvum_PYR-GCK          GGMKTLFGEVYAPSTIGTLLREFTFGHARQLESVLSEHVGALCERVDLLP
MMAR_3317|M.marinum_M               GDREHVFGAKASTTTMWRLVDQRIDAAHLPGIHAARAAARAAAWAAGAAP
                                    *. : :*.   :.:*:  *: :   .       .        .  .   *

MSMEG_6654|M.smegmatis_MC2_155      GADTQAFVDIDSLLRPVYGHAKQGASYGHTKIAGKQILRKGLSPLITTIS
Mvan_5550|M.vanbaalenii_PYR-1       GSDERAFVDIDSLLRPVYGRAKQGASYGHTKIAGKQILRKGLSPLVTTIS
MAV_1481|M.avium_104                GSDKGAFIDIDSLLRPVYGHAKQGASYGHTKIAGKQILRKGLSPLVTTIS
TH_0489|M.thermoresistible__bu      GAAQRVFVDIDSLLGPVYGHAKQGASYGHTKIAGKQVLRKGLSPLATTIS
Mflv_4617|M.gilvum_PYR-GCK          GADGRVFIDIDSLLRPVYGQAKQGASYGHTKIAGKQILRKGLSPLVTTIS
MMAR_3317|M.marinum_M               APGEWLHIDIDATLVIDHSDNKELATPTWKKSFGVHPLLAFLDRPEIAGG
                                    ..    .:***: *   :.  *: *:   .*  * : *   *.    : .

MSMEG_6654|M.smegmatis_MC2_155      TTTGAPMITGARLRAGKTNSGKGAARMIAQAVTTARAAGVNG------QI
Mvan_5550|M.vanbaalenii_PYR-1       TETAAPVITGARLRAGKTNSGKGAARMIAQAVATARASGVTG------QI
MAV_1481|M.avium_104                TTGAAPAITGMRLRAGKANSGKGAGRMIAQAIGTARAAGVRG------QI
TH_0489|M.thermoresistible__bu      TDTAAPVIAGMRLQAGKTGSGKGAGRMIAQAIVTARAAGASG------QI
Mflv_4617|M.gilvum_PYR-GCK          TEHCAPVITGARLRAGKTNSGKGAARMIAQAVATARGAGVTG------RI
MMAR_3317|M.marinum_M               EALAGLLHTGRAGSNTAADHITVLDQALASLPPAWRPDPGRGGDPDAPKV
                                        .   :*       :.  .   : :*.   : *     *      ::

MSMEG_6654|M.smegmatis_MC2_155      LVRGDSAYGNSTVVNACRRAGAHFSLVLTKTRAVAAAIEAISD-NAWTP-
Mvan_5550|M.vanbaalenii_PYR-1       LVRGDSAYGNSAVVAACRRAGARFSLVLTKTAAVAAAIESISE-SAWVP-
MAV_1481|M.avium_104                LVRGDSAYGTRAVVGACRSHGARFSLVMTRNTAIDRAINSIDE-SAWTP-
TH_0489|M.thermoresistible__bu      LVRGDSVYGRRAVVKACRRAGAQFSLVWTKNTAVRTAIAAIDE-DAWIP-
Mflv_4617|M.gilvum_PYR-GCK          LVRGDSAYGNSSVVTACRRAGARFSLVLTKTAAVVAAIADIND-TAWIP-
MMAR_3317|M.marinum_M               LVRCDSAGSTHAFADACRAAGVGFSFGYPVDWRVQDAVDTLTLGDAWYPG
                                    *** **. .  :.. ***  *. **:  .    :  *:  :    ** * 

MSMEG_6654|M.smegmatis_MC2_155      VNYPGAVRDPDTGAWISDAE--VAETTYTAFSSTNTPVTARLIVRRVKDA
Mvan_5550|M.vanbaalenii_PYR-1       VKYPGAVRDPDTGAWISDAE--VAETTYTAFSSTKTPVTARLIVRRVKDA
MAV_1481|M.avium_104                VRYPGAVRDPDTGDWISDAE--VAEIGYTAFASTKDRFTARLVVRRVKDA
TH_0489|M.thermoresistible__bu      VRYPGAVQDPDSGKWISDAE--VAEIGYTAFASTKDAITARLIVRRVKDA
Mflv_4617|M.gilvum_PYR-GCK          VCYPAAIPTPVPG-------------------------------------
MMAR_3317|M.marinum_M               IDTDGGIRD---GAWVAEATGLVNLSAWPAGTRLILRKERPHPGAQLRFT
                                    :   ..:     *                                     

MSMEG_6654|M.smegmatis_MC2_155      RYLDALFPVWRYHPFFTDSDEPVDAADITHRRHAIIETVFADLIDGPLAH
Mvan_5550|M.vanbaalenii_PYR-1       RFLDALFPVWRYHPFFTDSDEPVDASDITHRRHAIIETVFADLIDGPLAH
MAV_1481|M.avium_104                RFRDALFPVWRYHPFFTNTDLPTAEADITHRQHAIIETVFADLIDGPLAH
TH_0489|M.thermoresistible__bu      RHRDALFPVWRCHPFLTNSDEPTADADITNRHRAVVETTFADLIDGPLAR
Mflv_4617|M.gilvum_PYR-GCK          ---------------------------------------------SPMPK
MMAR_3317|M.marinum_M               DADGMRVTAFITDTGPAAVPGQVAGLELRHRQHARVEDRIRELKSTGLRN
                                                                                   : .

MSMEG_6654|M.smegmatis_MC2_155      MPSGRFGANSAW---ILCAAIAHNLLRAAGVLAGGAHALARGATLRRKIV
Mvan_5550|M.vanbaalenii_PYR-1       MPSGRFGANSAW---ILCAAIAYNLLRAVGVLAGGVHAVARGATLRRKFV
MAV_1481|M.avium_104                MPSGQFGANSAW---VLCAAIAHNLLRAAGVLAGGAHAVARGATLRRKIV
TH_0489|M.thermoresistible__bu      MPSGHFGANSAW---ILCAGIAHNLLRGAATLAGEPHIVARGA-MRRKIV
Mflv_4617|M.gilvum_PYR-GCK          SP------------------------------------------------
MMAR_3317|M.marinum_M               LPCHAFSANAAWQEIILAAADLITWTRLIGFTTQPELARVEITTFRYRVL
                                     *                                                

MSMEG_6654|M.smegmatis_MC2_155      NIPARLARPQRRPILHLPSHWPWAQQWLTLWRNTIGYSPPTAATH-
Mvan_5550|M.vanbaalenii_PYR-1       NIPARLARPQRRAILHLPTHWPWAQQWLTLWRNTIGHSPPTAATH-
MAV_1481|M.avium_104                NIPARLACPQRRPILHLPTHWPWADHWITLWCNTIGHSPPTTATI-
TH_0489|M.thermoresistible__bu      NIPARLARPQRRPVLHLPSHWPWADAWLRLWHNLFRERPPPQTVPA
Mflv_4617|M.gilvum_PYR-GCK          KPPAPLSVPRRLRSRHG-----------------------------
MMAR_3317|M.marinum_M               HVAARITRGARQVRLCIDATWRWAAMIATAWQAIRTAFG-------
                                    : .* ::   *