For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VGFLDDVGRIADKIGLPNPADVVNGAVNGVNDARAFVGDVVEGDFHGALTNGRKLIGDAQDVIGGLGSLG VFPNVATGPIMDAVLKLADSRILAAAQMAIAAMKATTGNGNPEDGGGFRGSAEKLANAVNTLIDAEPHFD RWDGTASQVYNAVNASHRRLTSDTQAADSNIAAVLKIEAEQIIRTRGRLDEISQFLYDYGLATAVANYSG PGKAAQLIADMTVAGLAVQSANVTMAILTKNVIENAARVKKHAGTYTDVQDDTSGEVNACDPFAIPKDDL PRGDDSTKLPTPNGNGTVDPPSRTLPETPFTMPEPEEPIQYGPPATPQPAPLPPVPAAPSSENLDTPQAV PAR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_6446 | - | - | 100% (353) | hypothetical protein MSMEG_6446 |
| M. smegmatis MC2 155 | MSMEG_0055 | - | 3e-23 | 31.56% (282) | hypothetical protein MSMEG_0055 |
| M. smegmatis MC2 155 | MSMEG_0723 | - | 5e-12 | 27.59% (174) | hypothetical protein MSMEG_0723 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_0157 | - | 3e-10 | 26.82% (220) | hypothetical protein Mflv_0157 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | MLBr_00405 | - | 8e-05 | 26.49% (151) | hypothetical protein MLBr_00405 |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1325 | - | 1e-05 | 23.77% (244) | hypothetical protein MMAR_1325 |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_2666 | - | 6e-13 | 30.68% (176) | PUTATIVE putative hypothetical protein MSMEG_0078 |
| M. ulcerans Agy99 | MUL_2554 | - | 2e-05 | 23.77% (244) | hypothetical protein MUL_2554 |
| M. vanbaalenii PYR-1 | Mvan_5688 | - | 2e-49 | 35.47% (358) | hypothetical protein Mvan_5688 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1325|M.marinum_M --------------MPAGLIAAAVRTIVNLGSFGQQFVGVNDPKFTNPEY
MUL_2554|M.ulcerans_Agy99 --------------MPAGLIAAAVRTIVNLGSFGQQFVGVNDPKFTNPEY
MSMEG_6446|M.smegmatis_MC2_155 MGFLDDVGRIADKIGLPNPADVVNGAVNGVNDARAFVGDVVEGDFHGALT
Mvan_5688|M.vanbaalenii_PYR-1 MSLFDDVSGVVG-----NVVDVVEGSVGTVESGVDFVGSVLDGDVTGATR
Mflv_0157|M.gilvum_PYR-GCK ------------------------MALGKLWVDANYFYGVADHANMMSSD
TH_2666|M.thermoresistible__bu --------------------------MLDAYSTLNWGKSVVEHPMSAKDH
MLBr_00405|M.leprae_Br4923 -----------------MSGAFIIDPTLKAIEAWHALLGIGVPNDGGVLY
.:
MMAR_1325|M.marinum_M LAASATGMASDGLTAVFGQTWVPQALAKRVGHSQLTSLASSKAAQGASAI
MUL_2554|M.ulcerans_Agy99 LAASATGMASDGLTAVFGQTWVPQALAKRVGHSQLTSLASSKAAQGASAI
MSMEG_6446|M.smegmatis_MC2_155 NGRKLIGDAQDVIGGLGSLGVFPN-VATGPIMDAVLKLADSRILAAA---
Mvan_5688|M.vanbaalenii_PYR-1 DAYEFVDNARDVLGGVRDLGVSIGRVPSRFVDNPILELANSPPIELA---
Mflv_0157|M.gilvum_PYR-GCK PALGSAAIATDAAILMQSLAAVGG---STMGATGLATSVATPIINAG---
TH_2666|M.thermoresistible__bu TGWGIAGTGADFVTLMQGMTEAG----SGLDQGRLAKAAATPIIRAA---
MLBr_00405|M.leprae_Br4923 SSLSFFEKALEHLAAAFPGDGWLGSAADKYAGQNRKRVDIFQELAELD--
. . :
MMAR_1325|M.marinum_M LWTINIVEVLETLMGFGPPAEGDELLVGSTQFAKAQAQLGSALPDNS-WQ
MUL_2554|M.ulcerans_Agy99 LWTINIVEVLETLMGFGPPAEGDELLVGSTQFAKAQAQLGSALPDNS-WQ
MSMEG_6446|M.smegmatis_MC2_155 ---QMAIAAMKATTGNGNPEDGGGFRGSAEKLANAVNTLIDAEPHFDRWD
Mvan_5688|M.vanbaalenii_PYR-1 ---QRVIAGMRLTTGSGDPVDGEEFKNAAKLMQEALELLIDAAPHGDHWS
Mflv_0157|M.gilvum_PYR-GCK ---LMTLTAASNTLGFGRPEDGERFTDGARQFSEANDELQQAVPPPD-WQ
TH_2666|M.thermoresistible__bu ---LLAMMVMSNTCGVGTPEKGDRFEEGAQAFEAAGEALGATKSPES-WQ
MLBr_00405|M.leprae_Br4923 ---KELIELIHNQANSVQTTRG--ILDGAKKALLFVRPVAIDLNYIP---
: . . * : .: :
MMAR_1325|M.marinum_M GSASYAYASQNTALQNRGQALAELDVKFAALVKDQAEWVTHGRLGIAILK
MUL_2554|M.ulcerans_Agy99 GSASYAYASQNTALQNRGQALAELDVKFAALVKDQAEWATHGRLGIAILK
MSMEG_6446|M.smegmatis_MC2_155 GTASQVYNAVNASHRRLTSDTQAADSNIAAVLKIEAEQIIRTRGRLDEIS
Mvan_5688|M.vanbaalenii_PYR-1 GAASEQYAGANTQNRRATSGVQVADWNIADFLEAEAEQVMRTRKTLDDIN
Mflv_0157|M.gilvum_PYR-GCK GDASDAYGLRNTEQQQRAGSMATFDGQIQEVLAEEAGQVQDTRDFVSTRQ
TH_2666|M.thermoresistible__bu GKASNTYTDRNDEQRARAERMAAIDRTVKEILDAEAHQVDVARKMLDRCQ
MLBr_00405|M.leprae_Br4923 --LVGSVMSASIQAQACAAAMAAVSGGLAYLLVQTAIHTAKFVALLARLA
. : . . .: * :
MMAR_1325|M.marinum_M NLLLAAFAVEMALMFAVPAGPAMARSFGFT-VSGLGIAIAMGLLSTVLTY
MUL_2554|M.ulcerans_Agy99 NLLLATFAVEMALMFAVPAGPAMARSFGFT-VSGLGIAIAMGLLSTVLTY
MSMEG_6446|M.smegmatis_MC2_155 QFLYDYGLATAVANYSG-PGKAAQLIADMT-VAGLAVQSANVTMAILTKN
Mvan_5688|M.vanbaalenii_PYR-1 EYLFQFALSTAWMNGIP-GGRAAKLVVDAT-AAAGGALSAERALLTLVAD
Mflv_0157|M.gilvum_PYR-GCK VMLAAAIPAAITAKLIPPGGAAAAMAIELA-AVAATVPFAMQRVTEMVSH
TH_2666|M.thermoresistible__bu TVLSLSIPAAIAAKAIPFKGPAISTAIEVA-AVAGTAPLASLRYNELTRA
MLBr_00405|M.leprae_Br4923 HLLASAVADVVSDGVAIIKGIVDHLWHFIAGALTGLKDIVEKIIHWFFGL
* * . : . . .
MMAR_1325|M.marinum_M SVENSKKADVLTANYQDLTPDPYQGADPSMPVAANMPASAESTISSFAAS
MUL_2554|M.ulcerans_Agy99 SVENSKKADVLTANYQDLTPDPYQGADPSMPMAANMPASAESTISSFAAS
MSMEG_6446|M.smegmatis_MC2_155 VIENAARVKKHAGTYTDVQDDTS--GEVNA-------------CDPFAIP
Mvan_5688|M.vanbaalenii_PYR-1 SVERGGKIRDQFNLYEGAANQERKLDDPTC-------------DGPFVPA
Mflv_0157|M.gilvum_PYR-GCK SADNADRIRQIGSHYGVVDESAQMPGGLSG-------------AQSGTPA
TH_2666|M.thermoresistible__bu VIRNAARMTQAAGEYSSVASAANPS-------------------------
MLBr_00405|M.leprae_Br4923 FSHWWSRLHSFFGGIPGLSGATSGLSQVTGLFG------VPGLAGSSGLL
:
MMAR_1325|M.marinum_M GTAFTAEAAGSLGRASGAADESAFYSAAADEAVPLEDAPSATSAFTMPTL
MUL_2554|M.ulcerans_Agy99 GTAFTAEAAGSLGRASGAADESAFYSAAADEAVPLEDAPSATSAFTMPTL
MSMEG_6446|M.smegmatis_MC2_155 --KDDLPRGDDSTKLPTPNGNG--TVDPPSRTLPETPFT-------MPEP
Mvan_5688|M.vanbaalenii_PYR-1 --KVDRSDAGRPGRFDNPHYTVPTPVEPPQHGPAATPYIGGGSSVPMPAP
Mflv_0157|M.gilvum_PYR-GCK PLRVSESIRGTAGIQQNVAATIDSARSAPDGSAGDVFKTHGVVCTSTAAA
TH_2666|M.thermoresistible__bu --------------------------------------------------
MLBr_00405|M.leprae_Br4923 SGESLLSTENLPSLAGVGAGLGLGSLPQLAQLHAASTRQGTRSQAGVSAE
MMAR_1325|M.marinum_M AQLMAISGQGAKFSGHVSQHANLANQAMGQVQQVASMAQQGKGTAPAEDT
MUL_2554|M.ulcerans_Agy99 AQLMAISGQGAKFSGHVSQHANLANQAMGQVQQVASMAQQGKGTAPAEDT
MSMEG_6446|M.smegmatis_MC2_155 EEPIQY-----------------GPPATPQPAPLP-----PVPAAPSSEN
Mvan_5688|M.vanbaalenii_PYR-1 QSTSRT-----------------AHPQGSAPRPWAGTNPTAAPASPTPQP
Mflv_0157|M.gilvum_PYR-GCK LKSAEL-----------------ARRSAAEKMHLISTDLSAKLGSSATEY
TH_2666|M.thermoresistible__bu --------------------------------------------------
MLBr_00405|M.leprae_Br4923 LSTEQFGGQQ-------------EPVSAQGSQGMGGSQGMGGMTPASTKS
MMAR_1325|M.marinum_M AQAEATTVEDVEGAGADSAGAAAGRAPIEAAAADTPPAQQPIFAQQVV
MUL_2554|M.ulcerans_Agy99 AQTEATTVEDVEGAGADSAGAAAGRAPIEAAAADTPPAQQPIFAQQVV
MSMEG_6446|M.smegmatis_MC2_155 LDTP---------------QAVPAR-----------------------
Mvan_5688|M.vanbaalenii_PYR-1 TGAPGTRTGSLPGQGAGNRGAAPLRVTARPTSDDKSQEIPT-------
Mflv_0157|M.gilvum_PYR-GCK SHTEQQNADAVD-------RQMPPR-----------------------
TH_2666|M.thermoresistible__bu ------------------------------------------------
MLBr_00405|M.leprae_Br4923 KKDERKKKKYSEGAAAGTDDAERAPIEVQSGGGKRALAQHVV------