For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_6222 (-)

annotation: integral membrane protein
coordinates: 6285668 - 6286591
length: 307

MVSQPEPVVTGDAVVLDVSIAQLPVRVLAILIDIFAIFIFYVVGVLLWSITLTQLDEALSAAILIIFTVL
AIVGYPVIMETATRGRSLGKMALGLRVVSEDGSPERFRQALFRGISGFIEIWMLTGGPAVICSLLSSKGK
RIGDIFAGTVVISERGPRMQPPPAMPPALAWWASSLQLSGLGPEQAELARQYLNRAQHLDPRIRDMMGQR
ILGEVASRISPPPPPGAPPQCVLAAVLAERHRRELARLMPTPPPPPSPPTTPPWSPPGYPAAGYPPQPPV
PAYSPPPAVPAHSPPQQPSAGGFAPPR
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_6222--100% (307)integral membrane protein
M. smegmatis MC2 155MSMEG_3531-1e-0937.50% (104) hypothetical protein MSMEG_3531
M. smegmatis MC2 155MSMEG_5916-4e-0835.16% (91) hypothetical protein MSMEG_5916

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3720-1e-10763.84% (307) hypothetical protein Mb3720
M. gilvum PYR-GCKMflv_1333-1e-11270.61% (279) RDD domain-containing protein
M. tuberculosis H37RvRv3695-1e-10763.84% (307) hypothetical protein Rv3695
M. leprae Br4923MLBr_02312-7e-6365.34% (176) hypothetical protein MLBr_02312
M. abscessus ATCC 19977MAB_0386c-9e-8960.82% (268) hypothetical protein MAB_0386c
M. marinum MMMAR_5205-1e-11166.67% (306) hypothetical protein MMAR_5205
M. avium 104MAV_0408-1e-10966.00% (300) integral membrane protein
M. thermoresistible (build 8)TH_1718-1e-10863.73% (306) POSSIBLE CONSERVED MEMBRANE PROTEIN
M. ulcerans Agy99MUL_4278-1e-11166.67% (306) hypothetical protein MUL_4278
M. vanbaalenii PYR-1Mvan_5459-1e-11667.97% (306) RDD domain-containing protein

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_1333|M.gilvum_PYR-GCK          MVGQQQPVVTGDAVVLDIQIAQLPVRALSALIDVSVVALVYIIGVILWAM
Mvan_5459|M.vanbaalenii_PYR-1       MVAQHQPVVTGDAVVLDVQIAQLPVRVLSALIDVTVVFVVYVLGVILWAV
MSMEG_6222|M.smegmatis_MC2_155      MVSQPEPVVTGDAVVLDVSIAQLPVRVLAILIDIFAIFIFYVVGVLLWSI
TH_1718|M.thermoresistible__bu      MAMQPETVVTGDAVVLDVQIAQLPVRAVSALIDAAAIFTLYVLGLMLWAV
Mb3720|M.bovis_AF2122/97            ----MSEVVTGDAVVLDVQIAQLPVRAVSAVIDITIIFIGYILGLMLWAT
Rv3695|M.tuberculosis_H37Rv         ----MSEVVTGDAVVLDVQIAQLPVRAVSAVIDITIIFIGYILGLMLWAT
MMAR_5205|M.marinum_M               ----MSEVVTGDAVVLDVQIAQLPVRAVSAIIDMTVMFIGYIMGLTLWAA
MUL_4278|M.ulcerans_Agy99           ----MSEVVTGDAVVLDVQIAQLPVRAVSAIIDMTVMFIGYIMGLTLWAA
MAV_0408|M.avium_104                ----MSEVVTGDAVVLDVQIAQLPVRALSALIDIAVIVVGYLLGLMLWAA
MLBr_02312|M.leprae_Br4923          --------------------------------------------------
MAB_0386c|M.abscessus_ATCC_199      ----MSELVTGDAVVLDVKVAQLPVRVVSAFIDIFVQMIVLYGGIFVVAF
                                                                                      

Mflv_1333|M.gilvum_PYR-GCK          TLSQFDPAFSGAVLIIFTVLALVGYPAIFETATRGRTLGKMALGLRVVSD
Mvan_5459|M.vanbaalenii_PYR-1       TLTQFDPAFSGAVLIIFTVLALVGYPTIFETATRGKTLGKLALGLRVVSE
MSMEG_6222|M.smegmatis_MC2_155      TLTQLDEALSAAILIIFTVLAIVGYPVIMETATRGRSLGKMALGLRVVSE
TH_1718|M.thermoresistible__bu      ALASFDDALSAAVLIVFTVLTLVGYPLVFEMATRGRTPGKMAMGLRVVSD
Mb3720|M.bovis_AF2122/97            ALTQFDEALTTAFLIIFTVLALVGYPLVWETATRGRSVGKIVMGLRVVSD
Rv3695|M.tuberculosis_H37Rv         ALTQFDEALTTAFLIIFTVLALVGYPLVWETATRGRSVGKIVMGLRVVSD
MMAR_5205|M.marinum_M               SLSELDEALTIAFLIIFTVLVLVGYPVIMETATRGRSLGKIAMGLRVVSD
MUL_4278|M.ulcerans_Agy99           SLSELDEALTIAFLIIFTVLVLVGYPVIMETATRGRSLGKIAMGLRVVSD
MAV_0408|M.avium_104                TLTQFDTALSNAILLIFTVLVIVGYPLILETATRGRSVGKIALGLRVVSD
MLBr_02312|M.leprae_Br4923          ------------------------------------------MGLRVVSD
MAB_0386c|M.abscessus_ATCC_199      SLSQFDAALTGALSIVYSVLALVGYPVIWEMATRGRSLGKMAMGLRVVSD
                                                                              :******:

Mflv_1333|M.gilvum_PYR-GCK          DGSPERFRQALFRALAGVIEIWMLTGGPAVLCSLVSSKGKRIGDIFAGTV
Mvan_5459|M.vanbaalenii_PYR-1       DGSPERFRQALFRALAGVIELWMLTGGPAVLCSLLSPKGKRIGDIFAGTV
MSMEG_6222|M.smegmatis_MC2_155      DGSPERFRQALFRGISGFIEIWMLTGGPAVICSLLSSKGKRIGDIFAGTV
TH_1718|M.thermoresistible__bu      DGGPERFRQALFRALSSVIEIWMFMGGPAVLCSLISPRGKRIGDYFAGTV
Mb3720|M.bovis_AF2122/97            DGGPERFRQALFRALASVVEIWMLLGSPAVICSMLSPKAKRVGDVFAGTV
Rv3695|M.tuberculosis_H37Rv         DGGPERFRQALFRALASVVEIWMLLGSPAVICSMLSPKAKRVGDVFAGTV
MMAR_5205|M.marinum_M               DGGPERFRQALFRALAAVVEIWMLLGSPAVICSMLSPKAKRVGDIFAGTI
MUL_4278|M.ulcerans_Agy99           DGGPERFRQALFRALAAVVEIWMLLGSPAVICSMLSPKAKRVGDIFAGTI
MAV_0408|M.avium_104                DGGPERFRQALFRALASLVEIWMLFGSPAVICSILSPKAKRIGDIFAGTV
MLBr_02312|M.leprae_Br4923          DGSPEHFRQALFRVLASVVEIWMLLGSPAVICSMLSPKAKHIGDIFPGTV
MAB_0386c|M.abscessus_ATCC_199      DGGPERLRQAVIRALSAVVEIFMFMGAPAVIASLASTKGKRLGDIFAGTM
                                    **.**::***::* ::..:*::*: *.***:.*: *.:.*::** *.**:

Mflv_1333|M.gilvum_PYR-GCK          VISERAPRQAPPPAMPPQLAWWASSLQLSGLAPSQAEMARQFLARAGQLD
Mvan_5459|M.vanbaalenii_PYR-1       VISERAPRQSPPPVMPPQLAWWATTLALSGLSPSQAEIARQFLSRARQLD
MSMEG_6222|M.smegmatis_MC2_155      VISERGPRMQPPPAMPPALAWWASSLQLSGLGPEQAELARQYLNRAQHLD
TH_1718|M.thermoresistible__bu      VISERAPRQTPPPPMPPQLAGWAATLELSGLSADQFNLARQYLSRAPQLE
Mb3720|M.bovis_AF2122/97            VVSERGPRLGPPPVMPPSLAWWASSLQLSGLTAGQAEVARQFLVRAPQLD
Rv3695|M.tuberculosis_H37Rv         VVSERGPRLGPPPVMPPSLAWWASSLQLSGLTAGQAEVARQFLVRAPQLD
MMAR_5205|M.marinum_M               VVSERGPRLAPPPAMPPTLAWWASSLQLSGLSAGQAEVARQFLSRAPQLD
MUL_4278|M.ulcerans_Agy99           VVSERGPRLAPPPAMPPTLAWWASSLQLSGLSAGQAEVARQFLSRAPQLD
MAV_0408|M.avium_104                VVNERGPRLGPPPAMPPSLAWWASSLQLSGLSSGQAEVARQFLSRAAQLD
MLBr_02312|M.leprae_Br4923          VISERRPQRGPSPAMPPSLAWWASSLQLSGLNTRQAELAHQFLSRAPQLD
MAB_0386c|M.abscessus_ATCC_199      VISERGPKLPPPPMMPPQLAQWAQSLQLSGLTSDQADLARQFLNRAGQLA
                                    *:.** *:  *.* *** ** ** :* **** . * ::*:*:* ** :* 

Mflv_1333|M.gilvum_PYR-GCK          PHIRDQMAYRVTSDVVAQISPPPPPGVPPALVLAAVLAERHRRELARLQH
Mvan_5459|M.vanbaalenii_PYR-1       PQVRDQMAYRIASDVVAQISPPPPPGTPPALVLAAVLAERHRRELGRLQQ
MSMEG_6222|M.smegmatis_MC2_155      PRIRDMMGQRILGEVASRISPPPPPGAPPQCVLAAVLAERHRRELARLMP
TH_1718|M.thermoresistible__bu      PAVRDEMAYRIAADLAPRISPPPPPGTPPHHLLAAVVAERHRRELARLRP
Mb3720|M.bovis_AF2122/97            PALREQMAYRIAGDVVARIAPPPPPGVPPQLVLAAVLAERHRRELLRLRP
Rv3695|M.tuberculosis_H37Rv         PALREQMAYRIAGDVVARIAPPPPPGVPPQLVLAAVLAERHRRELLRLRP
MMAR_5205|M.marinum_M               LRLRHQMAYRIAGDVLSHIAPPPPPGTPPQLVLAAVLAERHRRELARLR-
MUL_4278|M.ulcerans_Agy99           LRLRHQMAYRIAGDVLSHIAPPPPPGTPPQLVLAAVLAERHRRELARLR-
MAV_0408|M.avium_104                PGLRLQMAYRIAGDVVARIAPPPPPGAPPELVLAAVLAERHRRELARLR-
MLBr_02312|M.leprae_Br4923          PQLQEQMAYRITGDVMSRIAPPPPSSTPPQLMLAAVLAERHRHKLVQLR-
MAB_0386c|M.abscessus_ATCC_199      PHTRDQMLYQISTDVLASIAPPPPPGTPPQFMLAAVLAERHRRALAQMR-
                                       :  *  ::  :: . *:****...**  :****:*****: * ::  

Mflv_1333|M.gilvum_PYR-GCK          P--APG-------------PGWSAAP------------------PTSPPP
Mvan_5459|M.vanbaalenii_PYR-1       QPFQPG-------------PVWPAPPQPPAATPP-------SWPPAPPSA
MSMEG_6222|M.smegmatis_MC2_155      TPPPPPSPP--------TTPPWSPPGYPAAGYPPQPPVPAYSPPPAVPAH
TH_1718|M.thermoresistible__bu      QAAVPAA------------PVWYPPQQPGHPVYPAPPYQPQYQPPQQPAQ
Mb3720|M.bovis_AF2122/97            TLPPAGQAPWAQMAPHRGWPPGLSGATPWSPQQPV-IPWPEPDPPPQAAP
Rv3695|M.tuberculosis_H37Rv         TLPPAGQAPWAQMAPHRGWPPGLSGATPWSPQQPV-IPWPEPDPPPQAAP
MMAR_5205|M.marinum_M               ---PAGAG-----APP-GWPPQTPPAPVWWPGQPAPQPQIQPQFAPDPAP
MUL_4278|M.ulcerans_Agy99           ---PAGAG-----APP-GWPPQTPPAPVWWPGQPAPQPLIQPPFAPDPAP
MAV_0408|M.avium_104                -------------------PPAPWPAPGYPPAWPGSGPAPQWPAPGPANP
MLBr_02312|M.leprae_Br4923          -------------------PTPVGPT----PSSPTVSKYPVPPRVAWAGI
MAB_0386c|M.abscessus_ATCC_199      -------------------PDYPATPP------------PAPSAPPPAPE
                                                       *                           .  

Mflv_1333|M.gilvum_PYR-GCK          PPPAAG--GGFTPPS
Mvan_5459|M.vanbaalenii_PYR-1       PPPQHP--GGFAPPS
MSMEG_6222|M.smegmatis_MC2_155      SPPQQPSAGGFAPPR
TH_1718|M.thermoresistible__bu      QPPDPSP-GGFVPPS
Mb3720|M.bovis_AF2122/97            WPQQAPDGPGFSPPG
Rv3695|M.tuberculosis_H37Rv         WPQQAPDGPGFSPPG
MMAR_5205|M.marinum_M               SPPQGPVGGGFSPPS
MUL_4278|M.ulcerans_Agy99           SPPQGPVGGGFSPPS
MAV_0408|M.avium_104                GPPEG-FSAGFTPPR
MLBr_02312|M.leprae_Br4923          CSTQFLVASGHR---
MAB_0386c|M.abscessus_ATCC_199      PSESSTGRSGFATPG
                                     .       *.