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M. smegmatis MC2 155 MSMEG_6057 (-)

annotation: MspD protein
coordinates: 6124745 - 6125368
length: 207

VRYLVMMFALLVSVTLVSPRPANAVDNQLSVVDGQGRTLTVQQAETFLNGVFPLDRNRLTREWFHSGRAT
YHVAGPGADEFEGTLELGYQVGFPWSLGVGINFSYTTPNILIDGGDITQPPFGLDTIITPNLFPGVSISA
DLGNGPGIQEVATFSVDVKGAKGAVAVSNAHGTVTGAAGGVLLRPFARLIASTGDSVTTYGEPWNMN
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_6057--100% (207)MspD protein
M. smegmatis MC2 155MSMEG_0965-3e-9782.52% (206) porin
M. smegmatis MC2 155MSMEG_0520-1e-9684.06% (207) porin

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_1891-2e-8776.89% (212) hypothetical protein Mflv_1891
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_1081-1e-7267.16% (201) porin precursor
M. marinum M-----
M. avium 104MAV_3943-2e-0527.63% (152) hypothetical protein MAV_3943
M. thermoresistible (build 8)TH_1730-1e-9785.50% (200) MspD protein
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_4839-3e-8675.73% (206) hypothetical protein Mvan_4839

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_1891|M.gilvum_PYR-GCK          -----------MKAITRVLIAMVASIAALFVSTGTSHAGLDNELS-----
Mvan_4839|M.vanbaalenii_PYR-1       -----------MKVISRVLIAMVASIAALFASTGTSHAGLDNELS-----
MSMEG_6057|M.smegmatis_MC2_155      --------------MRYLVMMFALLVSVTLVSPRPANA-VDNQLS-----
TH_1730|M.thermoresistible__bu      ---------------------MATAVAALVVSPGTAHAGLDNELS-----
MAB_1081|M.abscessus_ATCC_1997      --MRTVGIRRVVQSTLTSLILVVGMVGLTVIGTGTAHAGLDDELT-----
MAV_3943|M.avium_104                MVVRRALVAAVCLALSLPTAPTTGADPDAAPPPPEAAPAAEGALPSNPPA
                                                          .         .  : .  :. *.     

Mflv_1891|M.gilvum_PYR-GCK          -VVDGQGRTLTVQQWDTFLNGVFPLDRNRLTREWFHSGKATYIVAGEGAD
Mvan_4839|M.vanbaalenii_PYR-1       -LVDGQGRTLTIQQWDTFLNGVFPLDRNRLTREWFHSGKATYIVAGEGAD
MSMEG_6057|M.smegmatis_MC2_155      -VVDGQGRTLTVQQAETFLNGVFPLDRNRLTREWFHSGRATYHVAGPGAD
TH_1730|M.thermoresistible__bu      -LVDGQDRTLTVQQWDTFLNGVFPLDRNRLTREWFHSGRAKYRVEGPGAE
MAB_1081|M.abscessus_ATCC_1997      -LVDGKGRLLRIQQWDTFLNGVFPLDRNRLTREWFHSGRAAYEVTGAGSD
MAV_3943|M.avium_104                ILKTPDGWTLGLGARDEQQVPVAPLTTALSSREYLASG--IFVGSLSGPT
                                     :   ..  * :   :     * **     :**:: **   :     *. 

Mflv_1891|M.gilvum_PYR-GCK          DFEGTLELGYQVGFPWSLGVGINFSYTTPNIAFDGYGLDLATPDDPFLGL
Mvan_4839|M.vanbaalenii_PYR-1       DFEGTLELGYQVGFPWSLGVGINFSYTTPNIAFDGWGLD----DN----L
MSMEG_6057|M.smegmatis_MC2_155      EFEGTLELGYQVGFPWSLGVGINFSYTTPNILIDGGDIT----QPPFG--
TH_1730|M.thermoresistible__bu      DFEGTLELGYQIGFPWSLGVGINFSYTTPNILIDGGDIT----GPPFG--
MAB_1081|M.abscessus_ATCC_1997      TFEGTLELGYQVGYPWSLGVGLNFNYTTPNTSIL-YGIPNAFGGTP---E
MAV_3943|M.avium_104                QPQGVLEVGYEIG------CGIDMSTSDGVTIGGTAGITPGVTGPVTG--
                                      :*.**:**::*       *:::. :         .:            

Mflv_1891|M.gilvum_PYR-GCK          ADSIVTPPLFPGVSISADLGNGPG-IQEVATFSVDVAGPGGSVVVSNAHG
Mvan_4839|M.vanbaalenii_PYR-1       ADSIVTPPLFPGVSISADLGNGPG-IQEVATFSVDVAGPGGSVAVSNAHG
MSMEG_6057|M.smegmatis_MC2_155      LDTIITPNLFPGVSISADLGNGPG-IQEVATFSVDVKGAKGAVAVSNAHG
TH_1730|M.thermoresistible__bu      LDSVITPNLFPGVSISADLGNGPG-IQEVATFSVDVAGPSGKVAVSNAHG
MAB_1081|M.abscessus_ATCC_1997      ASYVQTTNLLPSAGINVDLGNGPG-IQEVATFSVAIAGPKGAVAVSNAHG
MAV_3943|M.avium_104                VPGDVLPLVVAPIAGVLNVGLKPGLVIVVPVVKKQFRGPNPWVMVSNFHV
                                          . :..  .   ::*  ** :  *....  . *.   * *** * 

Mflv_1891|M.gilvum_PYR-GCK          TVTGAAGGVLLRPFARL--ISSTGDSVSTYGEPWNMN
Mvan_4839|M.vanbaalenii_PYR-1       TVTGAAGGVLLRPFARL--ISSTGDSVTTYGAPWNMN
MSMEG_6057|M.smegmatis_MC2_155      TVTGAAGGVLLRPFARL--IASTGDSVTTYGEPWNMN
TH_1730|M.thermoresistible__bu      TVTGAAGGVLLRPFARL--IASTGDSVTTYGEPWNMN
MAB_1081|M.abscessus_ATCC_1997      TVTGAAGGVLLRPYARL--ISSAGDSVTTYGETWDMK
MAV_3943|M.avium_104                KIDGCVGQSFIRSYAVLNRVTDESDVVLSYVGVTKAV
                                    .: *..*  ::*.:* *  ::. .* * :*    .