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M. abscessus ATCC 19977 MAB_1081 (-)

annotation: porin precursor
coordinates: 1095480 - 1096148
length: 222

MRTVGIRRVVQSTLTSLILVVGMVGLTVIGTGTAHAGLDDELTLVDGKGRLLRIQQWDTFLNGVFPLDRN
RLTREWFHSGRAAYEVTGAGSDTFEGTLELGYQVGYPWSLGVGLNFNYTTPNTSILYGIPNAFGGTPEAS
YVQTTNLLPSAGINVDLGNGPGIQEVATFSVAIAGPKGAVAVSNAHGTVTGAAGGVLLRPYARLISSAGD
SVTTYGETWDMK
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_1081--100% (222)porin precursor
M. abscessus ATCC 19977MAB_1080-e-11091.87% (209) porin precursor
M. abscessus ATCC 19977MAB_2800-6e-0831.68% (161) hypothetical protein MAB_2800

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_1891-3e-7967.94% (209) hypothetical protein Mflv_1891
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. marinum M-----
M. avium 104MAV_3943-7e-0528.21% (156) hypothetical protein MAV_3943
M. smegmatis MC2 155MSMEG_0965-3e-7869.08% (207) porin
M. thermoresistible (build 8)TH_1730-1e-7871.21% (198) MspD protein
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_4840-3e-7968.93% (206) hypothetical protein Mvan_4840

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_0965|M.smegmatis_MC2_155      -----------MKAISRVLIAMVAAIAALFTSTGTSHAGLDNELS-----
TH_1730|M.thermoresistible__bu      ---------------------MATAVAALVVSPGTAHAGLDNELS-----
Mflv_1891|M.gilvum_PYR-GCK          -----------MKAITRVLIAMVASIAALFVSTGTSHAGLDNELS-----
Mvan_4840|M.vanbaalenii_PYR-1       -----------MKAISRVLIAVVASIAALFVSTGTSHAGLDNELS-----
MAB_1081|M.abscessus_ATCC_1997      --MRTVGIRRVVQSTLTSLILVVGMVGLTVIGTGTAHAGLDDELT-----
MAV_3943|M.avium_104                MVVRRALVAAVCLALSLPTAPTTGADPDAAPPPPEAAPAAEGALPSNPPA
                                                          .         .  : .. :. *.     

MSMEG_0965|M.smegmatis_MC2_155      -LVDGQDRTLTVQQWDTFLNGVFPLDRNRLTREWFHSGRAKYIVAGPGAD
TH_1730|M.thermoresistible__bu      -LVDGQDRTLTVQQWDTFLNGVFPLDRNRLTREWFHSGRAKYRVEGPGAE
Mflv_1891|M.gilvum_PYR-GCK          -VVDGQGRTLTVQQWDTFLNGVFPLDRNRLTREWFHSGKATYIVAGEGAD
Mvan_4840|M.vanbaalenii_PYR-1       -LVDGQGRTLTVQQWDTFLNGVFPLDRNRLTREWFHSGKATYIVAGEGAD
MAB_1081|M.abscessus_ATCC_1997      -LVDGKGRLLRIQQWDTFLNGVFPLDRNRLTREWFHSGRAAYEVTGAGSD
MAV_3943|M.avium_104                ILKTPDGWTLGLGARDEQQVPVAPLTTALSSREYLASG--IFVGSLSGPT
                                     :   ..  * :   *     * **     :**:: **   :     *. 

MSMEG_0965|M.smegmatis_MC2_155      EFEGTLELGYQIGFPWSLGVGINFSYTTPNILIDDGDIT----APPFG--
TH_1730|M.thermoresistible__bu      DFEGTLELGYQIGFPWSLGVGINFSYTTPNILIDGGDIT----GPPFG--
Mflv_1891|M.gilvum_PYR-GCK          DFEGTLELGYQVGFPWSLGVGINFSYTTPNIAFDGYGLDLATPDDPFLGL
Mvan_4840|M.vanbaalenii_PYR-1       DFEGTLELGYQVGFPWSLGVGINFSYTTPNIAFDGWGLD----DN----L
MAB_1081|M.abscessus_ATCC_1997      TFEGTLELGYQVGYPWSLGVGLNFNYTTPNTSIL-YGIPNAFGGTP---E
MAV_3943|M.avium_104                QPQGVLEVGYEIG------CGIDMSTSDGVTIGGTAGITPGVTGPVTG--
                                      :*.**:**::*       *:::. :         .:            

MSMEG_0965|M.smegmatis_MC2_155      LNSVITPNLFPGVSISADLGNGPG-IQEVATFSVDVSGAEGGVAVSNAHG
TH_1730|M.thermoresistible__bu      LDSVITPNLFPGVSISADLGNGPG-IQEVATFSVDVAGPSGKVAVSNAHG
Mflv_1891|M.gilvum_PYR-GCK          ADSIVTPPLFPGVSISADLGNGPG-IQEVATFSVDVAGPGGSVVVSNAHG
Mvan_4840|M.vanbaalenii_PYR-1       ADSIVTPPLFPGVSISADLGNGPG-IQEVATFSVDVAGPGGSVAVSNAHG
MAB_1081|M.abscessus_ATCC_1997      ASYVQTTNLLPSAGINVDLGNGPG-IQEVATFSVAIAGPKGAVAVSNAHG
MAV_3943|M.avium_104                VPGDVLPLVVAPIAGVLNVGLKPGLVIVVPVVKKQFRGPNPWVMVSNFHV
                                          . :..  .   ::*  ** :  *....  . *.   * *** * 

MSMEG_0965|M.smegmatis_MC2_155      TVTGAAGGVLLRPFARL--IASTGDSVTTYGEPWNMN
TH_1730|M.thermoresistible__bu      TVTGAAGGVLLRPFARL--IASTGDSVTTYGEPWNMN
Mflv_1891|M.gilvum_PYR-GCK          TVTGAAGGVLLRPFARL--ISSTGDSVSTYGEPWNMN
Mvan_4840|M.vanbaalenii_PYR-1       TVTGAAGGVLLRPFARL--ISSTGDSVTTYGAPWNMN
MAB_1081|M.abscessus_ATCC_1997      TVTGAAGGVLLRPYARL--ISSAGDSVTTYGETWDMK
MAV_3943|M.avium_104                KIDGCVGQSFIRSYAVLNRVTDESDVVLSYVGVTKAV
                                    .: *..*  ::*.:* *  ::. .* * :*    .