For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KVISRVLIAMVASIAALFASTGTSHAGLDNELSLVDGQGRTLTIQQWDTFLNGVFPLDRNRLTREWFHSG KATYIVAGEGADDFEGTLELGYQVGFPWSLGVGINFSYTTPNIAFDGWGLDDNLADSIVTPPLFPGVSIS ADLGNGPGIQEVATFSVDVAGPGGSVAVSNAHGTVTGAAGGVLLRPFARLISSTGDSVTTYGAPWNMN*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4839 | - | - | 100% (209) | hypothetical protein Mvan_4839 |
M. vanbaalenii PYR-1 | Mvan_4840 | - | e-118 | 98.09% (209) | hypothetical protein Mvan_4840 |
M. vanbaalenii PYR-1 | Mvan_1836 | - | e-115 | 96.17% (209) | hypothetical protein Mvan_1836 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_1891 | - | 1e-112 | 91.24% (217) | hypothetical protein Mflv_1891 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1080 | - | 1e-79 | 70.10% (204) | porin precursor |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_3943 | - | 4e-05 | 26.32% (171) | hypothetical protein MAV_3943 |
M. smegmatis MC2 155 | MSMEG_0965 | - | 1e-100 | 84.36% (211) | porin |
M. thermoresistible (build 8) | TH_1730 | - | 3e-94 | 82.09% (201) | MspD protein |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_4839|M.vanbaalenii_PYR-1 MKVISRV----------LIAMVASIAALFASTGTSHAGLDNELSLVDG-- Mflv_1891|M.gilvum_PYR-GCK MKAITRV----------LIAMVASIAALFVSTGTSHAGLDNELSVVDG-- MSMEG_0965|M.smegmatis_MC2_155 MKAISRV----------LIAMVAAIAALFTSTGTSHAGLDNELSLVDG-- TH_1730|M.thermoresistible__bu --------------------MATAVAALVVSPGTAHAGLDNELSLVDG-- MAB_1080|M.abscessus_ATCC_1997 MKLLGKVSGWARRGVLAVGALLMTLVALIATTATAHAGLDDELTLVDG-- MAV_3943|M.avium_104 -MVVRRALVAAVCLALSLPTAPTTGADPDAAPPPPEAAPAAEGALPSNPP : . .:. ...*. * :: .. Mvan_4839|M.vanbaalenii_PYR-1 ------QGRTLTIQQWDTFLNGVFPLDRNRLTREWFHSGKATYIVAGEGA Mflv_1891|M.gilvum_PYR-GCK ------QGRTLTVQQWDTFLNGVFPLDRNRLTREWFHSGKATYIVAGEGA MSMEG_0965|M.smegmatis_MC2_155 ------QDRTLTVQQWDTFLNGVFPLDRNRLTREWFHSGRAKYIVAGPGA TH_1730|M.thermoresistible__bu ------QDRTLTVQQWDTFLNGVFPLDRNRLTREWFHSGRAKYRVEGPGA MAB_1080|M.abscessus_ATCC_1997 ------KGRLLRIQQWDTFLNGVFPLDRNRLTREWFHSGRAVYEVTGAGS MAV_3943|M.avium_104 AILKTPDGWTLGLGARDEQQVPVAPLTTALSSREYLASG--IFVGSLSGP .. * : * * ** :**:: ** : *. Mvan_4839|M.vanbaalenii_PYR-1 DDFEGTLELGYQVGFPWSLGVGINFSYTTPNIAFDGWGLD----DN---- Mflv_1891|M.gilvum_PYR-GCK DDFEGTLELGYQVGFPWSLGVGINFSYTTPNIAFDGYGLDLATPDDPFLG MSMEG_0965|M.smegmatis_MC2_155 DEFEGTLELGYQIGFPWSLGVGINFSYTTPNILIDDGDIT----APPFG- TH_1730|M.thermoresistible__bu EDFEGTLELGYQIGFPWSLGVGINFSYTTPNILIDGGDIT----GPPFG- MAB_1080|M.abscessus_ATCC_1997 DTFEGTLELGYQVGYPWSLGVGLNFNYTTPNTSIL-YGIPNAFGGSPE-- MAV_3943|M.avium_104 TQPQGVLEVGYEIG------CGIDMSTSDGVTIGGTAGITPGVTGPVTG- :*.**:**::* *:::. : .: Mvan_4839|M.vanbaalenii_PYR-1 LADSIVTPPLFPGVSISADLGNGPG-IQEVATFSVDVAGPGGSVAVSNAH Mflv_1891|M.gilvum_PYR-GCK LADSIVTPPLFPGVSISADLGNGPG-IQEVATFSVDVAGPGGSVVVSNAH MSMEG_0965|M.smegmatis_MC2_155 -LNSVITPNLFPGVSISADLGNGPG-IQEVATFSVDVSGAEGGVAVSNAH TH_1730|M.thermoresistible__bu -LDSVITPNLFPGVSISADLGNGPG-IQEVATFSVDVAGPSGKVAVSNAH MAB_1080|M.abscessus_ATCC_1997 -ASYVQTTNLLPSAGINVDLGNGPG-IQEVATFSVAVAGPKGAVAVSNAH MAV_3943|M.avium_104 -VPGDVLPLVVAPIAGVLNVGLKPGLVIVVPVVKKQFRGPNPWVMVSNFH . :.. . ::* ** : *.... . *. * *** * Mvan_4839|M.vanbaalenii_PYR-1 GTVTGAAGGVLLRPFARL--ISSTGDSVTTYGAPWNMN Mflv_1891|M.gilvum_PYR-GCK GTVTGAAGGVLLRPFARL--ISSTGDSVSTYGEPWNMN MSMEG_0965|M.smegmatis_MC2_155 GTVTGAAGGVLLRPFARL--IASTGDSVTTYGEPWNMN TH_1730|M.thermoresistible__bu GTVTGAAGGVLLRPFARL--IASTGDSVTTYGEPWNMN MAB_1080|M.abscessus_ATCC_1997 GTVTGAAGGVLLRPYARL--ISSAGDSVTTYGETWDMK MAV_3943|M.avium_104 VKIDGCVGQSFIRSYAVLNRVTDESDVVLSYVGVTKAV .: *..* ::*.:* * ::. .* * :* .