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VRIEGADLADVLVLVPEPFRDERGLFTRTFDAHIFDDHLGRPGVSASFVQDSQSRSSQGVVRGMHGRSER GEAKLVRCAHGAVHDVLVDIRPDSPTFGRQQAFLLDDKDFRHLYVPPGFLHGFQALTAIADVCYRIDRPH DPSEDLAVAYNDPDLGIDWPLPVTMVSPRDAGAGSWSDLIRHMS
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_5977 | rfbC | - | 100% (184) | dTDP-4-dehydrorhamnose 3,5-epimerase |
| M. smegmatis MC2 155 | MSMEG_1510 | - | 1e-22 | 38.73% (173) | dTDP-4-dehydrorhamnose 3,5-epimerase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3494 | rmlC | 1e-25 | 38.98% (177) | dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv3465 | rmlC | 1e-25 | 38.98% (177) | dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |
| M. leprae Br4923 | MLBr_01965 | rmlC | 3e-22 | 33.88% (183) | dTDP-4-dehydrorhamnose 3,5-epimerase |
| M. abscessus ATCC 19977 | MAB_3780 | - | 1e-21 | 34.95% (186) | dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |
| M. marinum M | MMAR_1081 | rmlC | 6e-22 | 37.65% (170) | dTDP-4-dehydrorhamnose 3,5-epimerase, RmlC |
| M. avium 104 | MAV_4407 | rfbC | 8e-22 | 41.04% (134) | dTDP-4-dehydrorhamnose 3,5-epimerase |
| M. thermoresistible (build 8) | TH_0329 | rmlC | 8e-22 | 37.58% (165) | dTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE RMLC |
| M. ulcerans Agy99 | MUL_0839 | rmlC | 9e-22 | 37.06% (170) | dTDP-4-dehydrorhamnose 3,5-epimerase, RmlC |
| M. vanbaalenii PYR-1 | Mvan_0213 | - | 1e-83 | 78.80% (184) | dTDP-4-dehydrorhamnose 3,5-epimerase |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3494|M.bovis_AF2122/97 ------------MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAF
Rv3465|M.tuberculosis_H37Rv ------------MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAF
MMAR_1081|M.marinum_M ------------MQARELKVPGAWEITPTIHGDSRGMFFEWLTDSGFTAF
MUL_0839|M.ulcerans_Agy99 ------------MQARELKVPGAWEITPTIHGDSRGMFFEWLTDSGFTAF
MAV_4407|M.avium_104 ------------MSARELKIPGAWEITPTVHGDARGHFFEWLTDKGFRSF
MLBr_01965|M.leprae_Br4923 ------------MNVKELDISGAWEITPTIHSDSRGMFFEWLTASRFSAF
TH_0329|M.thermoresistible__bu VTVPENVPQNVPENVRALRVPGAWEITPRLHEDARGVFFEWFTDAQFSAF
MAB_3780|M.abscessus_ATCC_1997 ------------MKIRELSVPGSFEITPVQHHDSRGVFLELFKGPALAEA
MSMEG_5977|M.smegmatis_MC2_155 ------------MRIEGADLADVLVLVPEPFRDERGLFTRTFDAHIFDDH
Mvan_0213|M.vanbaalenii_PYR-1 ------------MRIDNADLADVLVLTPTPFRDERGLFTRTFDAALFDAH
:.. :.* . * ** * . : :
Mb3494|M.bovis_AF2122/97 AGHS---LDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVV
Rv3465|M.tuberculosis_H37Rv AGHS---LDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVV
MMAR_1081|M.marinum_M CGHR---FDVRQANCSVSSAGVLRGLHFAELPPSQAKYVTCVSGAVFDVV
MUL_0839|M.ulcerans_Agy99 CGHR---FDVRQANCSVSSAGVLRGLHFAELPPSQSKYVTCVSGAVFDVV
MAV_4407|M.avium_104 AGHR---LDVRQANCSVSAAGVLRGLHFAQVPPSQAKYVTCVRGSVFDVV
MLBr_01965|M.leprae_Br4923 TGHR---LDVRQANCSVSSAGVLRGLHFAQVPPSQAKYVTCVTGSVFDVV
TH_0329|M.thermoresistible__bu AGHR---FDLRQANCSVSAKGVLRGLHFAEVPPSQAKYVTCVTGAVFDVV
MAB_3780|M.abscessus_ATCC_1997 IGHP---FELQQANCSVSAAGSLRGIHFADVPPGQAKYVTCLTGSVYDVV
MSMEG_5977|M.smegmatis_MC2_155 LGRPGVSASFVQDSQSRSSQGVVRGMHGRSER-GEAKLVRCAHGAVHDVL
Mvan_0213|M.vanbaalenii_PYR-1 LGTPGLSARFVQDSQSRSVRGVIRGMHGRSGR-GEAKLVRCAHGAIHDVL
* . * . * * * :**:* . .::* * * *::.**:
Mb3494|M.bovis_AF2122/97 VDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCS
Rv3465|M.tuberculosis_H37Rv VDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCS
MMAR_1081|M.marinum_M VDIRLGSPTFGQWDSVLLDDR-HRSIYISEGLAHGFLALQDKSTVMYMCS
MUL_0839|M.ulcerans_Agy99 VDIRLGSPTFGQWDSVLLDDR-HRSIYISEGLAHGFLALQDKSTVMYMCS
MAV_4407|M.avium_104 VDIRVGSPTFGQWDSVLLDDAEHRTIYISEGLGHGFLALQDNSTVMYLCS
MLBr_01965|M.leprae_Br4923 VDIRLGSPTFGCWTSITLNDSNRKTIYISESLAHGFLALQDNSTVMYLCS
TH_0329|M.thermoresistible__bu VDIRVGSPTFGQWDAVLLDGANRKSVYISEGLAHGFLALEDTSTVMYLCS
MAB_3780|M.abscessus_ATCC_1997 VDIRVGSPTFGAWDAVLLDPRDRRAVYVPEGVGHGFLALEDDSTVVYLCS
MSMEG_5977|M.smegmatis_MC2_155 VDIRPDSPTFGRQQAFLLDDKDFRHLYVPPGFLHGFQALTAIADVCYRID
Mvan_0213|M.vanbaalenii_PYR-1 VDIRPGSVTFGRQQAFLLDDNDFRHLYVPPGFLHGFQALTATADVCYRID
**** .* *** :. *: : :*:. .. *** ** : * * .
Mb3494|M.bovis_AF2122/97 AEYNPQREHTICATDPTLAVDWPLVDG----AAPSLSDRDAAAPSFEDVR
Rv3465|M.tuberculosis_H37Rv AEYNPQREHTICATDPTLAVDWPLVDG----AAPSLSDRDAAAPSFEDVR
MMAR_1081|M.marinum_M AEYNPQREHTICATDPELAIDWPLVDG----APPSLSERDAAAGSLDEVR
MUL_0839|M.ulcerans_Agy99 AEYNPQREHTICATDPELAIDWPLVDG----APPSLSERDAAAGSLDEVR
MAV_4407|M.avium_104 AEYNPGREHTICATDPALGIDWPLVAG----AAPTLSERDAAAPSLEEVR
MLBr_01965|M.leprae_Br4923 AEYNPAREHAICATDPDLAIDWPVVDG----VDTHLSKRDATAPNLDDIR
TH_0329|M.thermoresistible__bu APYTPDREHTVAALDPAIGIEWPTLDAP---AGRVLSERDAAAPTLVEAE
MAB_3780|M.abscessus_ATCC_1997 AGYAPGREHGIDPLDPTVGIQWPTRRPDGTELSLLVSEKDGAAPSLLDAR
MSMEG_5977|M.smegmatis_MC2_155 RPHDPSEDLAVAYNDPDLGIDWPLPVT-------MVSPRDAGAG------
Mvan_0213|M.vanbaalenii_PYR-1 RPHDPSENLAVAHDDPDLAIDWPLAGA-------IVSAQDRRAP------
: * .: : ** :.::** :* :* *
Mb3494|M.bovis_AF2122/97 ASGLLPRWEQTQRFIGEMRGT-
Rv3465|M.tuberculosis_H37Rv ASGLLPRWEQTQRFIGEMRGT-
MMAR_1081|M.marinum_M ASGVLPTWEETQRFIDGLRGT-
MUL_0839|M.ulcerans_Agy99 ASGVLPTWEETQRFIDGLRGT-
MAV_4407|M.avium_104 ASGLLPTWAETQAFIEGLPR--
MLBr_01965|M.leprae_Br4923 ASGLLPTWDETQNFIANLGSK-
TH_0329|M.thermoresistible__bu AAGLLPSWEETRAFVASLRRHG
MAB_3780|M.abscessus_ATCC_1997 DSGLLPDAAEVQAFLDGLSG--
MSMEG_5977|M.smegmatis_MC2_155 ------SWSDLIRHMS------
Mvan_0213|M.vanbaalenii_PYR-1 ------RWADLLMQLS------
: :