For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ATTYVQVQAEPLTVAPRYSVLLSTDTELIEAGQRLRREVLTDECGYTAAGTGFDADSFDDHCVHVLVRDN RTEELVGCARILPTGGVFATGGLYAAKSFDLTALDPLRLSLLEWGHAVVRADHRNGAVLMMMWSAILDYA DRYGYDHLFGCITVPTHPLGSVPGAQVRAVRDFMRRDFATPDCYAVHPYRPVVIDGVPLDDMPLDTAAVS DSPVPALVRGYLRLGARVCGEPAHDPLFGVAHFPTLLRTGRFDGGSVLNRTDGW*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_5323 | - | - | 100% (265) | hypothetical protein MSMEG_5323 |
| M. smegmatis MC2 155 | MSMEG_2355 | - | 5e-76 | 58.78% (245) | hypothetical protein MSMEG_2355 |
| M. smegmatis MC2 155 | MSMEG_5324 | - | 6e-53 | 44.94% (247) | hypothetical protein MSMEG_5324 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3053c | - | 4e-61 | 53.57% (224) | hypothetical protein Mb3053c |
| M. gilvum PYR-GCK | Mflv_4257 | - | 1e-70 | 57.43% (249) | hypothetical protein Mflv_4257 |
| M. tuberculosis H37Rv | Rv3027c | - | 4e-61 | 53.57% (224) | hypothetical protein Rv3027c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3359c | - | 5e-64 | 51.22% (246) | hypothetical protein MAB_3359c |
| M. marinum M | MMAR_1686 | - | 7e-63 | 54.20% (238) | hypothetical protein MMAR_1686 |
| M. avium 104 | MAV_3874 | - | 4e-68 | 54.81% (239) | hypothetical protein MAV_3874 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_1924 | - | 4e-62 | 53.78% (238) | hypothetical protein MUL_1924 |
| M. vanbaalenii PYR-1 | Mvan_2103 | - | 4e-71 | 58.16% (239) | hypothetical protein Mvan_2103 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3053c|M.bovis_AF2122/97 ---------------------------------------MVEAAQRLRYD
Rv3027c|M.tuberculosis_H37Rv ---------------------------------------MVEAAQRLRYD
MMAR_1686|M.marinum_M MSIASVLIPSDKPR---GPATDAG-AGPRYSLLLSTDSALIEAAQRLRYD
MUL_1924|M.ulcerans_Agy99 MSIASVLIPSDKPR---GPATDAG-AGPCYSLLLSTDSALIEAAQRLRYD
MAV_3874|M.avium_104 MSIASVLIPSDHPS---GPATGSS-AAPRYSLLLSADPAMIEAAQRLRYE
Mflv_4257|M.gilvum_PYR-GCK MNASSVLIPSDHS-------VTAG-SVPRYSMLLCTDPASIEAAQRLRYD
Mvan_2103|M.vanbaalenii_PYR-1 MSTASVLIAPDDID---HAQGGSSPSAPRYTLLLCTDVDSIEAAQRLRHD
MAB_3359c|M.abscessus_ATCC_199 MSTASVLIAADQSMPEVAGKTGEAALGPRYTLLLSNDSADIDAVQRLRYD
MSMEG_5323|M.smegmatis_MC2_155 MATTYVQVQAEPLT-----------VAPRYSVLLSTDTELIEAGQRLRRE
::* **** :
Mb3053c|M.bovis_AF2122/97 VFSTTPGFALP------AAADTRRDGDRFDEYCDHLLVRDDDTGELVGCY
Rv3027c|M.tuberculosis_H37Rv VFSTTPGFALP------AAADTRRDGDRFDEYCDHLLVRDDDTGELVGCY
MMAR_1686|M.marinum_M VFAATPGFALP------AADD-RRDVDRFDEYCDHLLVRDDDTGELVGCY
MUL_1924|M.ulcerans_Agy99 VFAATPGFALP------AADD-RRDVDRFDEYCDHLLVRDDDTGELVGCY
MAV_3874|M.avium_104 VFTSTPGFALP------SADGSGRDVDRFDEFCDHLLVRDDDTGELVGCY
Mflv_4257|M.gilvum_PYR-GCK VFTSEPGYTLNRGTLHRSAAPDGLDADRFDEFCDHLLVRDDDTGQLVGCY
Mvan_2103|M.vanbaalenii_PYR-1 VFSTEPGFTLTD-----DGGSGGLDADRFDEYCDHLLVRDDATGELVGCY
MAB_3359c|M.abscessus_ATCC_199 VFSSEPGFQLAS----TPEAFEGRDADRFDEHCDHLLVREDVSGDVVGCY
MSMEG_5323|M.smegmatis_MC2_155 VLTDECGYTAAG---------TGFDADSFDDHCVHVLVRDNRTEELVGCA
*:: *: * * **:.* *:***:: : ::***
Mb3053c|M.bovis_AF2122/97 RMLAPAGAIAAGGLYTATEFDVCAFDPLRPSLVEMGRAVVREGHRNGGVV
Rv3027c|M.tuberculosis_H37Rv RMLAPAGAIAAGGLYTATEFDVCAFDPLRPSLVEMGRAVVREGHRNGGVV
MMAR_1686|M.marinum_M RMLPPAGAIAAGGLYTATEFDVGAFDPLRPSLVEMGRAAVRDGHRNGAVV
MUL_1924|M.ulcerans_Agy99 RMLPPAGAIAAGGLYTATEFDVGAFDPLRPSLVEMGRAAVRDGHRNGAVV
MAV_3874|M.avium_104 RMLAPAGAIAAGGLYTATEFDIRAFDPLRPSLVEMGRAVVRDGHRNGGVV
Mflv_4257|M.gilvum_PYR-GCK RMLPPPGAIAAGGLYTATEFDISALDALRPSLVEMGRAVVRDGHRNGAVV
Mvan_2103|M.vanbaalenii_PYR-1 RMLPPPGAIAAGGLYTATEFDVTALDPLRPSLVEMGRAVVRDGHRNGAVV
MAB_3359c|M.abscessus_ATCC_199 RMLPPPGAIAAGGLYSATEFDISGLDSLRPQLVEMGRAVVRGDHRNGAVV
MSMEG_5323|M.smegmatis_MC2_155 RILPTGGVFATGGLYAAKSFDLTALDPLRLSLLEWGHAVVRADHRNGAVL
*:*.. *.:*:****:*..**: .:*.** .*:* *:*.** .****.*:
Mb3053c|M.bovis_AF2122/97 LLMWAGILAYLDRYGYDYVTGCVSVPI----GGDGETP-GSRLRGVRDFI
Rv3027c|M.tuberculosis_H37Rv LLMWAGILAYLDRYGYDYVTGCVSVPI----GGDGETP-GSRLRGVRDFI
MMAR_1686|M.marinum_M LLMWAGILAYLDRCDYDYVTGCVSVPIVEPTGRDGITP-GRELRGVRDFV
MUL_1924|M.ulcerans_Agy99 LLMWAGILAYLDRCDYDYVTGCVSVPIVEPTGRDGITP-GRELRGVRDFV
MAV_3874|M.avium_104 LLMWAGILAYLDRYGYDYVTGCVSVPIG---DADDAPP-GSRLRGVRDFV
Mflv_4257|M.gilvum_PYR-GCK LLMWTGILAYLDRSGYDYVTGCVSVPVA---DPDGLTPPGSRLRGVRDLV
Mvan_2103|M.vanbaalenii_PYR-1 LLMWAGILAYLDHSGYDYVAGCVSVPVA---DPEGRSPAGSQLRGVRDFV
MAB_3359c|M.abscessus_ATCC_199 LLMWAGILAYLDRCDYTYVTGCVSVPMQ---DSPEQAP-GSQVRAVRDFV
MSMEG_5323|M.smegmatis_MC2_155 MMMWSAILDYADRYGYDHLFGCITVPTH----PLGSVP-GAQVRAVRDFM
::**:.** * *: .* :: **::** * * .:*.***::
Mb3053c|M.bovis_AF2122/97 LNRHAAPPQCQVYPYRPVRVDGRSLDDI----LPPPRPAVPPLMRGYLRL
Rv3027c|M.tuberculosis_H37Rv LNRHAAPPQCQVYPYRPVRVDGRSLDDI----LPPPRPAVPPLMRGYLRL
MMAR_1686|M.marinum_M LRRHPAS--YRVDPYRPVRIDGKSLDDI----APPPRPAIPPLLRGYLRL
MUL_1924|M.ulcerans_Agy99 LRRHPAS--YRVDPYRPVRIDGKSLDDI----APPPRPAIPPLLRGYLRL
MAV_3874|M.avium_104 VSRHGAPARYRVRPHRPVVVDGTALDDI----PPPARPSVPALMRGYLRL
Mflv_4257|M.gilvum_PYR-GCK RRRNAAPPEYTVRPYRPVVIDGHHLDDI----AAPPRVKVPALLRGYLRL
Mvan_2103|M.vanbaalenii_PYR-1 IRRHAAPAEYTVRPYRPVVVDGRPLDEI----EPPARLSVPALMRGYLRL
MAB_3359c|M.abscessus_ATCC_199 MKRHAAAPQYTVRPYNPVVVGGMGLDDI----APPAKVQVPALMRGYLRL
MSMEG_5323|M.smegmatis_MC2_155 RRDFATPDCYAVHPYRPVVIDGVPLDDMPLDTAAVSDSPVPALVRGYLRL
:. * *:.** :.* **:: . . :*.*:******
Mb3053c|M.bovis_AF2122/97 GARACGEPAHDPDFGVGDFCLLLDKDHADTRYLRRLRSVAAASEMVNDAR
Rv3027c|M.tuberculosis_H37Rv GARACGEPAHDPDFGVGDFCLLLDKDHADTRYLRRLRSVAAASEMVNDAR
MMAR_1686|M.marinum_M GAQACGEPAHDPDFGVGDFCVLLGKRDADIRYLKRLRSVSAAAEMAGELA
MUL_1924|M.ulcerans_Agy99 GAQACGEPAHDPDFGVGDFCVLLGKRDADIRYLKRLRSVSAAAEMAGELA
MAV_3874|M.avium_104 GAQVCGEPAHDPDFGVGDFCVLLGKQDADTRYLKRLRSVSAAAELAGGR-
Mflv_4257|M.gilvum_PYR-GCK GAQVCGEPAHDPDFGVGDFPALLDKRRADVRYLTRLRSAAAAAADVTR--
Mvan_2103|M.vanbaalenii_PYR-1 GAQVCGEPAHDPDFGVGDFPALLAKRHADTRYLRRLRSVGMATAAVADGT
MAB_3359c|M.abscessus_ATCC_199 GAKVLGEPAHDPDFGVADFMALLNKNEADVRYLKRLRSVGAASEIGATTV
MSMEG_5323|M.smegmatis_MC2_155 GARVCGEPAHDPLFGVAHFPTLLRTGRFDG------GSVLNRTDGW----
**:. ******* ***..* ** . * *. :
Mb3053c|M.bovis_AF2122/97 -----
Rv3027c|M.tuberculosis_H37Rv -----
MMAR_1686|M.marinum_M GGAA-
MUL_1924|M.ulcerans_Agy99 GGAA-
MAV_3874|M.avium_104 -----
Mflv_4257|M.gilvum_PYR-GCK -----
Mvan_2103|M.vanbaalenii_PYR-1 RS---
MAB_3359c|M.abscessus_ATCC_199 PSESE
MSMEG_5323|M.smegmatis_MC2_155 -----