For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VEAAQRLRYDVFSTTPGFALPAAADTRRDGDRFDEYCDHLLVRDDDTGELVGCYRMLAPAGAIAAGGLYT ATEFDVCAFDPLRPSLVEMGRAVVREGHRNGGVVLLMWAGILAYLDRYGYDYVTGCVSVPIGGDGETPGS RLRGVRDFILNRHAAPPQCQVYPYRPVRVDGRSLDDILPPPRPAVPPLMRGYLRLGARACGEPAHDPDFG VGDFCLLLDKDHADTRYLRRLRSVAAASEMVNDAR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv3027c | - | - | 100% (246) | hypothetical protein Rv3027c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3053c | - | 1e-146 | 100.00% (246) | hypothetical protein Mb3053c |
| M. gilvum PYR-GCK | Mflv_4257 | - | 1e-99 | 73.17% (246) | hypothetical protein Mflv_4257 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3359c | - | 6e-92 | 67.90% (243) | hypothetical protein MAB_3359c |
| M. marinum M | MMAR_1686 | - | 1e-114 | 80.65% (248) | hypothetical protein MMAR_1686 |
| M. avium 104 | MAV_3874 | - | 1e-115 | 80.99% (242) | hypothetical protein MAV_3874 |
| M. smegmatis MC2 155 | MSMEG_2355 | - | 1e-99 | 72.36% (246) | hypothetical protein MSMEG_2355 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_1924 | - | 1e-114 | 80.65% (248) | hypothetical protein MUL_1924 |
| M. vanbaalenii PYR-1 | Mvan_2103 | - | 1e-101 | 75.20% (246) | hypothetical protein Mvan_2103 |
CLUSTAL 2.0.9 multiple sequence alignment
Rv3027c|M.tuberculosis_H37Rv --------------------------------------------MVEAAQ
Mb3053c|M.bovis_AF2122/97 --------------------------------------------MVEAAQ
MMAR_1686|M.marinum_M -----MSIASVLIPSDKPRGP-ATDAGAG---PRYSLLLSTDSALIEAAQ
MUL_1924|M.ulcerans_Agy99 -----MSIASVLIPSDKPRGP-ATDAGAG---PCYSLLLSTDSALIEAAQ
MAV_3874|M.avium_104 -----MSIASVLIPSDHPSGP-ATGSSAA---PRYSLLLSADPAMIEAAQ
Mflv_4257|M.gilvum_PYR-GCK -----MNASSVLIPSDHS-----VTAGSV---PRYSMLLCTDPASIEAAQ
MSMEG_2355|M.smegmatis_MC2_155 MLVMSMRAASVLIAADEATSR---PDRGA---KRYTLLLTTDPDLIDAAQ
Mvan_2103|M.vanbaalenii_PYR-1 -----MSTASVLIAPDDIDHAQGGSSPSA---PRYTLLLCTDVDSIEAAQ
MAB_3359c|M.abscessus_ATCC_199 -----MSTASVLIAADQSMPEVAGKTGEAALGPRYTLLLSNDSADIDAVQ
::*.*
Rv3027c|M.tuberculosis_H37Rv RLRYDVFSTTPGFALP------AAADTRRDGDRFDEYCDHLLVRDDDTGE
Mb3053c|M.bovis_AF2122/97 RLRYDVFSTTPGFALP------AAADTRRDGDRFDEYCDHLLVRDDDTGE
MMAR_1686|M.marinum_M RLRYDVFAATPGFALP------AADDR-RDVDRFDEYCDHLLVRDDDTGE
MUL_1924|M.ulcerans_Agy99 RLRYDVFAATPGFALP------AADDR-RDVDRFDEYCDHLLVRDDDTGE
MAV_3874|M.avium_104 RLRYEVFTSTPGFALP------SADGSGRDVDRFDEFCDHLLVRDDDTGE
Mflv_4257|M.gilvum_PYR-GCK RLRYDVFTSEPGYTLNRGTLHRSAAPDGLDADRFDEFCDHLLVRDDDTGQ
MSMEG_2355|M.smegmatis_MC2_155 RLRHDVFTSEPGYALA-------GSTDGRDADRFDEYCDHLLVRDERSGE
Mvan_2103|M.vanbaalenii_PYR-1 RLRHDVFSTEPGFTLTD-----DGGSGGLDADRFDEYCDHLLVRDDATGE
MAB_3359c|M.abscessus_ATCC_199 RLRYDVFSSEPGFQLAS----TPEAFEGRDADRFDEHCDHLLVREDVSGD
***::**:: **: * * *****.*******:: :*:
Rv3027c|M.tuberculosis_H37Rv LVGCYRMLAPAGAIAAGGLYTATEFDVCAFDPLRPSLVEMGRAVVREGHR
Mb3053c|M.bovis_AF2122/97 LVGCYRMLAPAGAIAAGGLYTATEFDVCAFDPLRPSLVEMGRAVVREGHR
MMAR_1686|M.marinum_M LVGCYRMLPPAGAIAAGGLYTATEFDVGAFDPLRPSLVEMGRAAVRDGHR
MUL_1924|M.ulcerans_Agy99 LVGCYRMLPPAGAIAAGGLYTATEFDVGAFDPLRPSLVEMGRAAVRDGHR
MAV_3874|M.avium_104 LVGCYRMLAPAGAIAAGGLYTATEFDIRAFDPLRPSLVEMGRAVVRDGHR
Mflv_4257|M.gilvum_PYR-GCK LVGCYRMLPPPGAIAAGGLYTATEFDISALDALRPSLVEMGRAVVRDGHR
MSMEG_2355|M.smegmatis_MC2_155 LVGCYRMLPPPGAIAAGGLYTATEFDVTALDVLRPSLVEMGRAVVRQDHR
Mvan_2103|M.vanbaalenii_PYR-1 LVGCYRMLPPPGAIAAGGLYTATEFDVTALDPLRPSLVEMGRAVVRDGHR
MAB_3359c|M.abscessus_ATCC_199 VVGCYRMLPPPGAIAAGGLYSATEFDISGLDSLRPQLVEMGRAVVRGDHR
:*******.*.*********:*****: .:* ***.*******.** .**
Rv3027c|M.tuberculosis_H37Rv NGGVVLLMWAGILAYLDRYGYDYVTGCVSVPIGG----DGETP-GSRLRG
Mb3053c|M.bovis_AF2122/97 NGGVVLLMWAGILAYLDRYGYDYVTGCVSVPIGG----DGETP-GSRLRG
MMAR_1686|M.marinum_M NGAVVLLMWAGILAYLDRCDYDYVTGCVSVPIVEPTGRDGITP-GRELRG
MUL_1924|M.ulcerans_Agy99 NGAVVLLMWAGILAYLDRCDYDYVTGCVSVPIVEPTGRDGITP-GRELRG
MAV_3874|M.avium_104 NGGVVLLMWAGILAYLDRYGYDYVTGCVSVPIGD---ADDAPP-GSRLRG
Mflv_4257|M.gilvum_PYR-GCK NGAVVLLMWTGILAYLDRSGYDYVTGCVSVPVADP---DGLTPPGSRLRG
MSMEG_2355|M.smegmatis_MC2_155 NGAVVLLMWAGILAYLDHAGYDHVTGCVSVPVAGA---AGEAP-GAQIRG
Mvan_2103|M.vanbaalenii_PYR-1 NGAVVLLMWAGILAYLDHSGYDYVAGCVSVPVADP---EGRSPAGSQLRG
MAB_3359c|M.abscessus_ATCC_199 NGAVVLLMWAGILAYLDRCDYTYVTGCVSVPMQDS---PEQAP-GSQVRA
**.******:*******: .* :*:******: .* * .:*.
Rv3027c|M.tuberculosis_H37Rv VRDFILNRHAAPPQCQVYPYRPVRVDGRSLDDILPPPRPAVPPLMRGYLR
Mb3053c|M.bovis_AF2122/97 VRDFILNRHAAPPQCQVYPYRPVRVDGRSLDDILPPPRPAVPPLMRGYLR
MMAR_1686|M.marinum_M VRDFVLRRH--PASYRVDPYRPVRIDGKSLDDIAPPPRPAIPPLLRGYLR
MUL_1924|M.ulcerans_Agy99 VRDFVLRRH--PASYRVDPYRPVRIDGKSLDDIAPPPRPAIPPLLRGYLR
MAV_3874|M.avium_104 VRDFVVSRHGAPARYRVRPHRPVVVDGTALDDIPPPARPSVPALMRGYLR
Mflv_4257|M.gilvum_PYR-GCK VRDLVRRRNAAPPEYTVRPYRPVVIDGHHLDDIAAPPRVKVPALLRGYLR
MSMEG_2355|M.smegmatis_MC2_155 VRDFVRRRHAAP--YTVHPYRPVVLDGRTLDDIAPPERVTVPALMRGYLR
Mvan_2103|M.vanbaalenii_PYR-1 VRDFVIRRHAAPAEYTVRPYRPVVVDGRPLDEIEPPARLSVPALMRGYLR
MAB_3359c|M.abscessus_ATCC_199 VRDFVMKRHAAAPQYTVRPYNPVVVGGMGLDDIAPPAKVQVPALMRGYLR
***:: *: . * *:.** :.* **:* .* : :*.*:*****
Rv3027c|M.tuberculosis_H37Rv LGARACGEPAHDPDFGVGDFCLLLDKDHADTRYLRRLRSVAAASEMVNDA
Mb3053c|M.bovis_AF2122/97 LGARACGEPAHDPDFGVGDFCLLLDKDHADTRYLRRLRSVAAASEMVNDA
MMAR_1686|M.marinum_M LGAQACGEPAHDPDFGVGDFCVLLGKRDADIRYLKRLRSVSAAAEMAGEL
MUL_1924|M.ulcerans_Agy99 LGAQACGEPAHDPDFGVGDFCVLLGKRDADIRYLKRLRSVSAAAEMAGEL
MAV_3874|M.avium_104 LGAQVCGEPAHDPDFGVGDFCVLLGKQDADTRYLKRLRSVSAAAELAGGR
Mflv_4257|M.gilvum_PYR-GCK LGAQVCGEPAHDPDFGVGDFPALLDKRRADVRYLTRLRSAAAAAADVTR-
MSMEG_2355|M.smegmatis_MC2_155 LGAQVCGEPAHDPVFGVGDFPALLDKRQADVRYLRRLRSA-SAAAHMTDG
Mvan_2103|M.vanbaalenii_PYR-1 LGAQVCGEPAHDPDFGVGDFPALLAKRHADTRYLRRLRSVGMATAAVADG
MAB_3359c|M.abscessus_ATCC_199 LGAKVLGEPAHDPDFGVADFMALLNKNEADVRYLKRLRSVGAASEIGATT
***:. ******* ***.** ** * ** *** ****. *:
Rv3027c|M.tuberculosis_H37Rv R-----
Mb3053c|M.bovis_AF2122/97 R-----
MMAR_1686|M.marinum_M AGGAA-
MUL_1924|M.ulcerans_Agy99 AGGAA-
MAV_3874|M.avium_104 ------
Mflv_4257|M.gilvum_PYR-GCK ------
MSMEG_2355|M.smegmatis_MC2_155 AA----
Mvan_2103|M.vanbaalenii_PYR-1 TRS---
MAB_3359c|M.abscessus_ATCC_199 VPSESE