For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRRRVLTVCLALVLCVVVVLAGGYWLSNSRTFQVAGALVHRVSTPEKVVALTLDDGPTDATRVVLRTLAA ARVPATFYLTGRELEAAPDLGAAIAAAGHEIGNHSFSHRRMVLMSSKTVASELERTDAAIRATGYTGPIT FRPPYGKKLWSLPRYLAEHDRISVTWDVEPDSATEPTADEIVAQTVDQVRPGSIILLHAMYGSRGPTRAA LPRIISELQSAGYRFVTVSQLIGMS
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_5023 | - | - | 100% (235) | chitooligosaccharide deacetylase |
| M. smegmatis MC2 155 | MSMEG_4373 | - | 1e-08 | 31.07% (103) | polysaccharide deacetylase, putative |
| M. smegmatis MC2 155 | MSMEG_1074 | - | 3e-08 | 27.62% (105) | polysaccharide deacetylase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1126 | - | 1e-22 | 33.49% (212) | glycosyl hydrolase |
| M. gilvum PYR-GCK | Mflv_2063 | - | 3e-22 | 35.29% (187) | polysaccharide deacetylase |
| M. tuberculosis H37Rv | Rv1096 | - | 1e-22 | 33.49% (212) | glycosyl hydrolase |
| M. leprae Br4923 | MLBr_01950 | - | 2e-22 | 32.06% (209) | carbohydrate degrading enzyme |
| M. abscessus ATCC 19977 | MAB_0459c | - | 7e-23 | 34.04% (188) | glycosylhydrolase |
| M. marinum M | MMAR_4371 | - | 7e-24 | 31.03% (232) | glycosyl hydrolase |
| M. avium 104 | MAV_1218 | - | 6e-22 | 31.11% (225) | carbohydrate degrading enzyme |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_0184 | - | 5e-25 | 31.47% (232) | glycosyl hydrolase |
| M. vanbaalenii PYR-1 | Mvan_4651 | - | 2e-23 | 36.51% (189) | polysaccharide deacetylase |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_4371|M.marinum_M MRKRPDNQAWRYWRMVVGVVAAVAVLV--IGSLTGHV---TRADDQSCAV
MUL_0184|M.ulcerans_Agy99 MRKRPDDQAWRYWRMVVGVVAAVAVLV--IGSLTGHV---TRADDQSCAV
MAV_1218|M.avium_104 MAKRPDTLAWRYWRTVVGVLAAVAVLV--IGGLTGHV---TRADDLSCSV
Mb1126|M.bovis_AF2122/97 MPKRPDNQTWRYWRTVTGVVVAGAVLV--VGGLSGRV---TRAENLSCSV
Rv1096|M.tuberculosis_H37Rv MPKRPDNQTWRYWRTVTGVVVAGAVLV--VGGLSGRV---TRAENLSCSV
MLBr_01950|M.leprae_Br4923 MLKRPDTQAWRYSRTVFGVVAAGAVLV--IGALTGHV---TRADDMSCAQ
MAB_0459c|M.abscessus_ATCC_199 MGTVLDSVRFQIAAVAVVLVAAAGVVG--IGVRHRLL---LGPDTVDCSR
Mflv_2063|M.gilvum_PYR-GCK MTSESGALDDAHRRQARPIRRLGAVVLGVITVFTAAP--TAAAGPVDCAA
Mvan_4651|M.vanbaalenii_PYR-1 MTSGSGAQYDTRGARARRIR-SAAILLGLVGGFIAAVPAPAAADSVDCAR
MSMEG_5023|M.smegmatis_MC2_155 MRRRVLTVCLALVLCVVVVLAGGYWLSN-SRTFQVAG----ALVHRVSTP
* . : : .:
MMAR_4371|M.marinum_M VKCVALTFDDGPSPFTDRLLQILKDNDAKATFFLIGNKVAANPAAAKRIA
MUL_0184|M.ulcerans_Agy99 VKCVALTFDDGPSPFTDRLLQILKDNDAKATFFLIGNKVAANPAAAKRIA
MAV_1218|M.avium_104 VKCVALTFDDGPGPFDERLLQILKDNDAKATFFLIGNKVAANPAGAKRIA
Mb1126|M.bovis_AF2122/97 IKCVALTFDDGPGPYTDRLLHILTDNDAKATFFLIGNKVAANPAGARRIA
Rv1096|M.tuberculosis_H37Rv IKCVALTFDDGPGPYTDRLLHILTDNDAKATFFLIGNKVAANPAGARRIA
MLBr_01950|M.leprae_Br4923 VKCIALTFDDGPGPYTDRLVQILKDNDAKATFFLIGNKVATNPAGAKRIV
MAB_0459c|M.abscessus_ATCC_199 YKCVALTFDDGPTPFTDRLLQTLTDRGAKATFFLIGNKVAADPAAARRIA
Mflv_2063|M.gilvum_PYR-GCK VPCVALTFDDGPGPHTDRLLDVLRAQGAKATFFVIGEKVAADPAATRRIT
Mvan_4651|M.vanbaalenii_PYR-1 VKCVALTFDDGPGPFTDRLLQTLRANNAEATFFLIGDKVAADPAAARRIV
MSMEG_5023|M.smegmatis_MC2_155 EKVVALTLDDGPTDATRVVLRTLAAARVPATFYLTGRELEAAPDLGAAIA
:***:**** :: * . ***:: * :: : * *.
MMAR_4371|M.marinum_M EAGMEIGSHTWEHPNMTTIPEADIAGQFSRANDAIKAATGRTPTLYRPAG
MUL_0184|M.ulcerans_Agy99 EAGMEIGSHTWEHPNMTTIPEADIAGQFSRANDAIKAATGRTPTLYRPAG
MAV_1218|M.avium_104 DAGMEIGNHTWEHPNMTTIPTEDVAAQFTRANDAIHAATGRTPNLYRPAG
Mb1126|M.bovis_AF2122/97 DAGMEIGSHTWEHPNMTTIPPEDIPGQFSRANDVIAAATGRTPTLYRPAG
Rv1096|M.tuberculosis_H37Rv DAGMEIGSHTWEHPNMTTIPPEDIPGQFSRANDVIAAATGRTPTLYRPAG
MLBr_01950|M.leprae_Br4923 DAGMEIGSHTWEHPNMTMLSTEDIADQFSRANHAITVATGRTPTLWRPAG
MAB_0459c|M.abscessus_ATCC_199 AAGMEVANHTWEHPNMATIPTADIGAQLSKGVEAIAAATGIAPHLYRPAG
Mflv_2063|M.gilvum_PYR-GCK GAGMQVGNHTWQHLDMTTLAPPDVAAQFARATEAIAAATGQRTPLARTGF
Mvan_4651|M.vanbaalenii_PYR-1 DAGMEIGNHTWSHPDLTAIPPQELPAQLSRATEVLERATGERPTLMRPPF
MSMEG_5023|M.smegmatis_MC2_155 AAGHEIGNHSFSHRRMVLMSSKTVASELERTDAAIRATGYTGPITFRPPY
** ::..*::.* :. :. : :: : .: : . *.
MMAR_4371|M.marinum_M GLSNAAVRQTAEKFGQAEILWDVIPFDWANDSNTAATRYMLMRQIKPGSV
MUL_0184|M.ulcerans_Agy99 GLSNAAVRQTAAKYGQAEILWDVIPFDWANDSNTAATRYMLMRQIKPGSV
MAV_1218|M.avium_104 GLSNPVVRQTAGQLGLAEILWDVIPFDWANDSNTAATRYMLMTYIKPGSV
Mb1126|M.bovis_AF2122/97 GLSNDAVRQAAAKVGQAEILWDVIPFDWINDSNTAATRHMLMTQIKPGSV
Rv1096|M.tuberculosis_H37Rv GLSNDAVRQAAAKVGQAEILWDVIPFDWINDSNTAATRHMLMTQIKPGSV
MLBr_01950|M.leprae_Br4923 GLSNEAVRQVAGRYGQAEILWDVIPFDWTNDSDTVATRCMLMMQIKPGSV
MAB_0459c|M.abscessus_ATCC_199 GVSNAAVRAEAGRQHLAEILWDVIPFDWINDADTAATVYMLKTQIKPGSV
Mflv_2063|M.gilvum_PYR-GCK GAIDDSVLAEAGRQGLTAVNWDVNPRDWHHDADPDAIRDAVLTQVRPGAV
Mvan_4651|M.vanbaalenii_PYR-1 GAVDDAVLAAAGSQGLAVVNWDVIPLDWENDTDIAATRAALTEQIRPNSV
MSMEG_5023|M.smegmatis_MC2_155 GKKLWSLPRYLAEHDRISVTWDVEP-DSATEPTADEIVAQTVDQVRPGSI
* : : *** * * :. ::*.::
MMAR_4371|M.marinum_M VLFHDTYSS---TVDLVYQFIPVLKANGYRLVTVSELLGPRAPGSSYGSR
MUL_0184|M.ulcerans_Agy99 VLFHDTYSS---TVDLVYQFIPVLKANGYRLVTVSELLGPRAPGNSYGSR
MAV_1218|M.avium_104 VLFHNTYSS---TVDLVYQFIPVLKANGYRLVTVSELLGPRAPGSSYGSR
Mb1126|M.bovis_AF2122/97 VLFHDTYSS---TVDVVYQFIPVLKANGYRLVTVSELLGPRAPGSSYGSR
Rv1096|M.tuberculosis_H37Rv VLFHDTYSS---TVDVVYQFIPVLKANGYRLVTVSELLGPRAPGSSYGSR
MLBr_01950|M.leprae_Br4923 VLFHDTYSS---TVDLVYQFIPVLKANGYRLVTVTELLGPRAPGSSYGRR
MAB_0459c|M.abscessus_ATCC_199 VLLHDTYSS---TVDIVYQFLPVLIANGYHMVTVSHLLGDRAPGTSYGGR
Mflv_2063|M.gilvum_PYR-GCK VLLHDTVAA---TVGAMADVVPALRARGYHLVTVSQLLGPLTPGSLYGSR
Mvan_4651|M.vanbaalenii_PYR-1 VLLHDTFAS---TVDLMAEFVPVLRANGYHLVTVSQMIGPRPPGSLYGTP
MSMEG_5023|M.smegmatis_MC2_155 ILLHAMYGSRGPTRAALPRIISELQSAGYRFVTVSQLIGMS---------
:*:* .: * : .:. * : **::***:.::*
MMAR_4371|M.marinum_M DNGPPVDELRDIPPSDIPPLPNTPSPKPMPNFPITDIAGQNSGGPNNGA
MUL_0184|M.ulcerans_Agy99 DNGPPVDELRDIPPSDIPPLPNTPSPKPMPNFPITDIAGQNSGGPNNGA
MAV_1218|M.avium_104 ENGPPVNGLRDIPASDIPKLPDTPSPKPMPNFPITDIPGQNSGGPNNGA
Mb1126|M.bovis_AF2122/97 ENGPPVNELRDIPASEIPPLPNTSSPKPMSNFPITDIAGQNSGGPNNGA
Rv1096|M.tuberculosis_H37Rv ENGPPVNELRDIPASEIPPLPNTSSPKPMPNFPITDIAGQNSGGPNNGA
MLBr_01950|M.leprae_Br4923 ENGPPVNQLHDIPANLIPALPNTSSPKPMPNFPITDISGQNSGGSNDGA
MAB_0459c|M.abscessus_ATCC_199 ENGPPVNDIHDIPPAQIPVLPATPSPQPAPNLPITDIAGQNPGGPQ---
Mflv_2063|M.gilvum_PYR-GCK ERA----------------------------------------------
Mvan_4651|M.vanbaalenii_PYR-1 P------------------------------------------------
MSMEG_5023|M.smegmatis_MC2_155 -------------------------------------------------