For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GTVLDSVRFQIAAVAVVLVAAAGVVGIGVRHRLLLGPDTVDCSRYKCVALTFDDGPTPFTDRLLQTLTDR GAKATFFLIGNKVAADPAAARRIAAAGMEVANHTWEHPNMATIPTADIGAQLSKGVEAIAAATGIAPHLY RPAGGVSNAAVRAEAGRQHLAEILWDVIPFDWINDADTAATVYMLKTQIKPGSVVLLHDTYSSTVDIVYQ FLPVLIANGYHMVTVSHLLGDRAPGTSYGGRENGPPVNDIHDIPPAQIPVLPATPSPQPAPNLPITDIAG QNPGGPQ*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0459c | - | - | 100% (288) | glycosylhydrolase |
M. abscessus ATCC 19977 | MAB_1240 | - | 6e-95 | 62.41% (282) | glycosylhydrolase |
M. abscessus ATCC 19977 | MAB_2590 | - | 7e-10 | 24.21% (190) | putative polysaccharide deacetylase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1126 | - | 1e-104 | 67.38% (279) | glycosyl hydrolase |
M. gilvum PYR-GCK | Mflv_2063 | - | 3e-60 | 56.65% (203) | polysaccharide deacetylase |
M. tuberculosis H37Rv | Rv1096 | - | 1e-105 | 67.74% (279) | glycosyl hydrolase |
M. leprae Br4923 | MLBr_01950 | - | 1e-100 | 62.63% (281) | carbohydrate degrading enzyme |
M. marinum M | MMAR_4371 | - | 1e-107 | 67.38% (282) | glycosyl hydrolase |
M. avium 104 | MAV_1218 | - | 1e-105 | 65.96% (282) | carbohydrate degrading enzyme |
M. smegmatis MC2 155 | MSMEG_5023 | - | 1e-22 | 34.04% (188) | chitooligosaccharide deacetylase |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_0184 | - | 1e-107 | 69.23% (273) | glycosyl hydrolase |
M. vanbaalenii PYR-1 | Mvan_4651 | - | 5e-70 | 62.87% (202) | polysaccharide deacetylase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2063|M.gilvum_PYR-GCK MTSESGALDDAHRRQARPIRRLGAVVLGVITVFTAAP--TAAAGPVDCAA Mvan_4651|M.vanbaalenii_PYR-1 MTSGSGAQYDTRGARARRIR-SAAILLGLVGGFIAAVPAPAAADSVDCAR MMAR_4371|M.marinum_M MRKRPDNQAWRYWRMVVGVVAAVAVLV--IGSLTGHV---TRADDQSCAV MUL_0184|M.ulcerans_Agy99 MRKRPDDQAWRYWRMVVGVVAAVAVLV--IGSLTGHV---TRADDQSCAV MAV_1218|M.avium_104 MAKRPDTLAWRYWRTVVGVLAAVAVLV--IGGLTGHV---TRADDLSCSV Mb1126|M.bovis_AF2122/97 MPKRPDNQTWRYWRTVTGVVVAGAVLV--VGGLSGRV---TRAENLSCSV Rv1096|M.tuberculosis_H37Rv MPKRPDNQTWRYWRTVTGVVVAGAVLV--VGGLSGRV---TRAENLSCSV MLBr_01950|M.leprae_Br4923 MLKRPDTQAWRYSRTVFGVVAAGAVLV--IGALTGHV---TRADDMSCAQ MAB_0459c|M.abscessus_ATCC_199 MGTVLDSVRFQIAAVAVVLVAAAGVVG--IGVRHRLL---LGPDTVDCSR MSMEG_5023|M.smegmatis_MC2_155 MRRRVLTVCLALVLCVVVVLAGGYWLSN-SRTFQVAG----ALVHRVSTP * . : : .: Mflv_2063|M.gilvum_PYR-GCK VPCVALTFDDGPGPHTDRLLDVLRAQGAKATFFVIGEKVAADPAATRRIT Mvan_4651|M.vanbaalenii_PYR-1 VKCVALTFDDGPGPFTDRLLQTLRANNAEATFFLIGDKVAADPAAARRIV MMAR_4371|M.marinum_M VKCVALTFDDGPSPFTDRLLQILKDNDAKATFFLIGNKVAANPAAAKRIA MUL_0184|M.ulcerans_Agy99 VKCVALTFDDGPSPFTDRLLQILKDNDAKATFFLIGNKVAANPAAAKRIA MAV_1218|M.avium_104 VKCVALTFDDGPGPFDERLLQILKDNDAKATFFLIGNKVAANPAGAKRIA Mb1126|M.bovis_AF2122/97 IKCVALTFDDGPGPYTDRLLHILTDNDAKATFFLIGNKVAANPAGARRIA Rv1096|M.tuberculosis_H37Rv IKCVALTFDDGPGPYTDRLLHILTDNDAKATFFLIGNKVAANPAGARRIA MLBr_01950|M.leprae_Br4923 VKCIALTFDDGPGPYTDRLVQILKDNDAKATFFLIGNKVATNPAGAKRIV MAB_0459c|M.abscessus_ATCC_199 YKCVALTFDDGPTPFTDRLLQTLTDRGAKATFFLIGNKVAADPAAARRIA MSMEG_5023|M.smegmatis_MC2_155 EKVVALTLDDGPTDATRVVLRTLAAARVPATFYLTGRELEAAPDLGAAIA :***:**** :: * . ***:: * :: : * *. Mflv_2063|M.gilvum_PYR-GCK GAGMQVGNHTWQHLDMTTLAPPDVAAQFARATEAIAAATGQRTPLARTGF Mvan_4651|M.vanbaalenii_PYR-1 DAGMEIGNHTWSHPDLTAIPPQELPAQLSRATEVLERATGERPTLMRPPF MMAR_4371|M.marinum_M EAGMEIGSHTWEHPNMTTIPEADIAGQFSRANDAIKAATGRTPTLYRPAG MUL_0184|M.ulcerans_Agy99 EAGMEIGSHTWEHPNMTTIPEADIAGQFSRANDAIKAATGRTPTLYRPAG MAV_1218|M.avium_104 DAGMEIGNHTWEHPNMTTIPTEDVAAQFTRANDAIHAATGRTPNLYRPAG Mb1126|M.bovis_AF2122/97 DAGMEIGSHTWEHPNMTTIPPEDIPGQFSRANDVIAAATGRTPTLYRPAG Rv1096|M.tuberculosis_H37Rv DAGMEIGSHTWEHPNMTTIPPEDIPGQFSRANDVIAAATGRTPTLYRPAG MLBr_01950|M.leprae_Br4923 DAGMEIGSHTWEHPNMTMLSTEDIADQFSRANHAITVATGRTPTLWRPAG MAB_0459c|M.abscessus_ATCC_199 AAGMEVANHTWEHPNMATIPTADIGAQLSKGVEAIAAATGIAPHLYRPAG MSMEG_5023|M.smegmatis_MC2_155 AAGHEIGNHSFSHRRMVLMSSKTVASELERTDAAIRATGYTGPITFRPPY ** ::..*::.* :. :. : :: : .: : . *. Mflv_2063|M.gilvum_PYR-GCK GAIDDSVLAEAGRQGLTAVNWDVNPRDWHHDADPDAIRDAVLTQVRPGAV Mvan_4651|M.vanbaalenii_PYR-1 GAVDDAVLAAAGSQGLAVVNWDVIPLDWENDTDIAATRAALTEQIRPNSV MMAR_4371|M.marinum_M GLSNAAVRQTAEKFGQAEILWDVIPFDWANDSNTAATRYMLMRQIKPGSV MUL_0184|M.ulcerans_Agy99 GLSNAAVRQTAAKYGQAEILWDVIPFDWANDSNTAATRYMLMRQIKPGSV MAV_1218|M.avium_104 GLSNPVVRQTAGQLGLAEILWDVIPFDWANDSNTAATRYMLMTYIKPGSV Mb1126|M.bovis_AF2122/97 GLSNDAVRQAAAKVGQAEILWDVIPFDWINDSNTAATRHMLMTQIKPGSV Rv1096|M.tuberculosis_H37Rv GLSNDAVRQAAAKVGQAEILWDVIPFDWINDSNTAATRHMLMTQIKPGSV MLBr_01950|M.leprae_Br4923 GLSNEAVRQVAGRYGQAEILWDVIPFDWTNDSDTVATRCMLMMQIKPGSV MAB_0459c|M.abscessus_ATCC_199 GVSNAAVRAEAGRQHLAEILWDVIPFDWINDADTAATVYMLKTQIKPGSV MSMEG_5023|M.smegmatis_MC2_155 GKKLWSLPRYLAEHDRISVTWDVEP-DSATEPTADEIVAQTVDQVRPGSI * : : *** * * :. ::*.:: Mflv_2063|M.gilvum_PYR-GCK VLLHDTVAA---TVGAMADVVPALRARGYHLVTVSQLLGPLTPGSLYGSR Mvan_4651|M.vanbaalenii_PYR-1 VLLHDTFAS---TVDLMAEFVPVLRANGYHLVTVSQMIGPRPPGSLYGTP MMAR_4371|M.marinum_M VLFHDTYSS---TVDLVYQFIPVLKANGYRLVTVSELLGPRAPGSSYGSR MUL_0184|M.ulcerans_Agy99 VLFHDTYSS---TVDLVYQFIPVLKANGYRLVTVSELLGPRAPGNSYGSR MAV_1218|M.avium_104 VLFHNTYSS---TVDLVYQFIPVLKANGYRLVTVSELLGPRAPGSSYGSR Mb1126|M.bovis_AF2122/97 VLFHDTYSS---TVDVVYQFIPVLKANGYRLVTVSELLGPRAPGSSYGSR Rv1096|M.tuberculosis_H37Rv VLFHDTYSS---TVDVVYQFIPVLKANGYRLVTVSELLGPRAPGSSYGSR MLBr_01950|M.leprae_Br4923 VLFHDTYSS---TVDLVYQFIPVLKANGYRLVTVTELLGPRAPGSSYGRR MAB_0459c|M.abscessus_ATCC_199 VLLHDTYSS---TVDIVYQFLPVLIANGYHMVTVSHLLGDRAPGTSYGGR MSMEG_5023|M.smegmatis_MC2_155 ILLHAMYGSRGPTRAALPRIISELQSAGYRFVTVSQLIGMS--------- :*:* .: * : .:. * : **::***:.::* Mflv_2063|M.gilvum_PYR-GCK ERA---------------------------------------------- Mvan_4651|M.vanbaalenii_PYR-1 P------------------------------------------------ MMAR_4371|M.marinum_M DNGPPVDELRDIPPSDIPPLPNTPSPKPMPNFPITDIAGQNSGGPNNGA MUL_0184|M.ulcerans_Agy99 DNGPPVDELRDIPPSDIPPLPNTPSPKPMPNFPITDIAGQNSGGPNNGA MAV_1218|M.avium_104 ENGPPVNGLRDIPASDIPKLPDTPSPKPMPNFPITDIPGQNSGGPNNGA Mb1126|M.bovis_AF2122/97 ENGPPVNELRDIPASEIPPLPNTSSPKPMSNFPITDIAGQNSGGPNNGA Rv1096|M.tuberculosis_H37Rv ENGPPVNELRDIPASEIPPLPNTSSPKPMPNFPITDIAGQNSGGPNNGA MLBr_01950|M.leprae_Br4923 ENGPPVNQLHDIPANLIPALPNTSSPKPMPNFPITDISGQNSGGSNDGA MAB_0459c|M.abscessus_ATCC_199 ENGPPVNDIHDIPPAQIPVLPATPSPQPAPNLPITDIAGQNPGGPQ--- MSMEG_5023|M.smegmatis_MC2_155 -------------------------------------------------