For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
WSAVLVLALVSAVDPVRIGITLLLIGRERPVANLLAYWLGLMAAGVGLAVIALTFLPGVVRPVTEFVVAA AEKPVIPPLQIAMGLLAIPVAVVIAMRARRRTLVAPVSEVADPVSAMAFAAAATPAASTASGKRSLLSRL SWPALFSGRWGNSAAMAFAAGLFSATPPLEYCFAILAIAASGAAIGTQVCAAVVFSLVSFAIAEIPLVGY LASPVKTKAIVARMHDWIGTYRRPIFACILGLFGVLMLASGVSTI*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4733 | - | - | 100% (256) | hypothetical protein MSMEG_4733 |
M. smegmatis MC2 155 | MSMEG_0413 | - | 4e-27 | 32.57% (261) | hypothetical protein MSMEG_0413 |
M. smegmatis MC2 155 | MSMEG_0403 | - | 2e-26 | 30.88% (272) | integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1544 | - | 4e-38 | 37.50% (256) | hypothetical protein Mb1544 |
M. gilvum PYR-GCK | Mflv_0400 | - | 3e-26 | 31.50% (254) | hypothetical protein Mflv_0400 |
M. tuberculosis H37Rv | Rv1517 | - | 2e-38 | 37.50% (256) | hypothetical protein Rv1517 |
M. leprae Br4923 | MLBr_01233 | - | 6e-27 | 30.71% (254) | hypothetical protein MLBr_01233 |
M. abscessus ATCC 19977 | MAB_4697 | - | 2e-35 | 37.74% (265) | hypothetical protein MAB_4697 |
M. marinum M | MMAR_2352 | - | 5e-42 | 35.80% (257) | hypothetical protein MMAR_2352 |
M. avium 104 | MAV_3059 | - | 2e-34 | 33.71% (267) | hypothetical protein MAV_3059 |
M. thermoresistible (build 8) | TH_4435 | - | 6e-39 | 37.84% (259) | PUTATIVE putative conserved hypothetical transmembrane protein |
M. ulcerans Agy99 | MUL_1527 | - | 2e-42 | 35.80% (257) | hypothetical protein MUL_1527 |
M. vanbaalenii PYR-1 | Mvan_0277 | - | 4e-24 | 29.76% (252) | hypothetical protein Mvan_0277 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0400|M.gilvum_PYR-GCK ----MWITLLAMAVAVSLEPFRIGMTVLMINRPRPGLQLLAFLTGGFAMG Mvan_0277|M.vanbaalenii_PYR-1 ----MWFPLLVMAAAVSLEPFRIGMTVVMVNRPRPVLQLLSFLAGGFVMG MLBr_01233|M.leprae_Br4923 ----MWITILLMAIAISLEPFRIGMTVLMLNRPRPTLQLLVFLCSGFTMG TH_4435|M.thermoresistible__bu VFGTMWGAVVLFALMAMGEPLRIGAAVLLISRPRPMFNLFLFWLGGIVAT Mb1544|M.bovis_AF2122/97 ----MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAG Rv1517|M.tuberculosis_H37Rv ----MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAG MMAR_2352|M.marinum_M ----MWTTVLILAVMTATEPVRLGVAIFLVSKPRPMVNLLAFWFGGMATG MUL_1527|M.ulcerans_Agy99 ----MWTTVLILAVMTATEPVRLGVAIFLVSKPRPMVNLLAFWFGGMATG MSMEG_4733|M.smegmatis_MC2_155 ----MWSAVLVLALVSAVDPVRIGITLLLIGRERPVANLLAYWLGLMAAG MAB_4697|M.abscessus_ATCC_1997 ----MWGSVLALVVLVALNPIRLGITLLVISRPKPVPNLLVYWAGCLIGC MAV_3059|M.avium_104 ----MWGSVLGLGMLAALNPVRLGLALLMISRPRPGPSLLAYWIGGLTVC ** :: : :* *:* ::.::.: :* .*: : . : Mflv_0400|M.gilvum_PYR-GCK TAVGVAVLFLLR---------PVLDS-------AQFTLPRVQIVVGLVVL Mvan_0277|M.vanbaalenii_PYR-1 TAVGLIVLFVLR---------PALGS-------AHFTLPRVQLGVGAVVL MLBr_01233|M.leprae_Br4923 MTVGFVVLFVFRR--------RLMAS-------MQLTLPKVQILIGVLAL TH_4435|M.thermoresistible__bu VLAGVVVLFLLRDVIGVVTAAAAASG-------SAIDIMSIQIAVGALAL Mb1544|M.bovis_AF2122/97 VGIALAVLVFMRDVALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIML Rv1517|M.tuberculosis_H37Rv VGIALAVLVFMRDVALAAIQGVVSAANEFREAVGILAGGRLHIVIGVIML MMAR_2352|M.marinum_M IGVALAVLLLLGDLANAIVDNVSSLA-----ATSVVG--HLQVGLGVVAL MUL_1527|M.ulcerans_Agy99 IGVALAVLLLLGDLANAIVDNVSSLA-----ATSVVG--HLQVGLGVVAL MSMEG_4733|M.smegmatis_MC2_155 VGLAVIALTFLPGVVRPVTEFVVAAA-------EKPVIPPLQIAMGLLAI MAB_4697|M.abscessus_ATCC_1997 IPAVVLPLTLLHVTPVFRSFAEG-VAISP-------TIRHIQVGMGLLAL MAV_3059|M.avium_104 VPELLIPVLLLNFTPMFGHPSHASPSTGS-------ALGKIQIGLGVVGL . : .: . ::: :* : : Mflv_0400|M.gilvum_PYR-GCK CTAAAVGSGLVGR----------------------------PRDPGRAPG Mvan_0277|M.vanbaalenii_PYR-1 VNAVLLATGVLGG----------------------------NRD-GTAAG MLBr_01233|M.leprae_Br4923 LVAAVLTVQVCISSEPPAES---------------------PVDSASGPP TH_4435|M.thermoresistible__bu ALAPVILLRSAARRKAAAPVGGPD----WPT------GRGPSVDSSDAPS Mb1544|M.bovis_AF2122/97 LLAARMVARARAQVGVPVGPVGVA----DG-------GMSALALAQRPPG Rv1517|M.tuberculosis_H37Rv LLAARMVARARAQVGVPVGPVGVA----DG-------GMSALALAQRPPG MMAR_2352|M.marinum_M LVAA-LVATG-FSVRSPA-LVASG----AG-------DSSTLMVAETPT- MUL_1527|M.ulcerans_Agy99 LVAA-LVATG-FSVRSPA-LVASG----AG-------DSSTLMVAETPT- MSMEG_4733|M.smegmatis_MC2_155 PVAVVIAMRARRRTLVAPVSEVADPVSAMAF------AAAATPAASTASG MAB_4697|M.abscessus_ATCC_1997 SVAVLIATRPLLRQRQYHMAISGNVPPTDADSPAPNPLSRLLGHADDDTS MAV_3059|M.avium_104 SIAAVLTVRFAARQRAAAPPPDDRTSELSAAPGATIAMPRLLTRAQDVSP * : . Mflv_0400|M.gilvum_PYR-GCK ---VLAMR-ARRLLD---GRSLWTAAAVGLGTAL-PSVDYLAALALIAAS Mvan_0277|M.vanbaalenii_PYR-1 RWAPLVTR-ARRLLE---GRSLWTAGVAGLGIAL-PSIDYLAALALIVAS MLBr_01233|M.leprae_Br4923 KPSKWAPRPLARLLN---GDSLWVAGVAGLGIAL-PSVDYLAALAVILTS TH_4435|M.thermoresistible__bu AFSRLSAR-VQGVLQ---GGSPWVAFFIGAWLGPGPPVELVAALTAIVAS Mb1544|M.bovis_AF2122/97 LVARLEVR-TQQMLQ---GDVVWPAFVVGVASSAPP-FESVVALTVIMAS Rv1517|M.tuberculosis_H37Rv LVARLEVR-TQQMLQ---GDVVWPAFVVGVASSAPP-FESVVALTVIMAS MMAR_2352|M.marinum_M RFSRLMAS-AQGALE---GGFPWAAFVVGLSSAGPPPVEYLVALTAIGAS MUL_1527|M.ulcerans_Agy99 RFSRLMAS-AQGALE---GGFPWAAFVVGLSSAGPPPVEYLVALTAIGVS MSMEG_4733|M.smegmatis_MC2_155 KRSLLSRLSWPALFSGRWGNSAAMAFAAGLFSAT-PPLEYCFAILAIAAS MAB_4697|M.abscessus_ATCC_1997 QDRSPFRRMLNRATFAWETGSLWVAFAIGLLLGGIEPDAGLFLIAILVTS MAV_3059|M.avium_104 DDRSVLRRLLGRMHSAWESGASWVAWVIGVIS--VPVDGVLFIVAIIAAS * * : : .* Mflv_0400|M.gilvum_PYR-GCK GAAAATQFGALMAFNAVAFALIEIPLLCYLVSPDRTRAVLASLNSWIRAR Mvan_0277|M.vanbaalenii_PYR-1 GAAAAVQFSALIVFNVVAFALVEIPLLCYLVAPDRTRAALSSLYEWVRAQ MLBr_01233|M.leprae_Br4923 GAAATTQVGALLMFNVVAFALIEIPLAAYLLAPDTTRAWTAALNNWIRSR TH_4435|M.thermoresistible__bu GATAGTQVGAVVVFALVMFAFAEIPLISHLVAPTRTEAVMMRLHTWVRVH Mb1544|M.bovis_AF2122/97 GAEIGTQFGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSN Rv1517|M.tuberculosis_H37Rv GAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVRSN MMAR_2352|M.marinum_M GAAMGTQLSATFVYLLVMLAIIEIPLISYLVHPGRTEATMLWLRNWLRAH MUL_1527|M.ulcerans_Agy99 GAAMGTQLSATFVYLLVMLAIIEIPLIGYLVHPGRTEATMLWLRNWLRAH MSMEG_4733|M.smegmatis_MC2_155 GAAIGTQVCAAVVFSLVSFAIAEIPLVGYLASPVKTKAIVARMHDWIGTY MAB_4697|M.abscessus_ATCC_1997 GANTATQIIVAAVFALGVLAIVELTLISYLVAPTKTHAVVQRVHDWALTH MAV_3059|M.avium_104 GASVTAQVSASVAFVVLMYAVVEVILVGYLATPGKTQSLLLVLHDWVRTY ** .*. . : *. *: * :* * *. . * Mflv_0400|M.gilvum_PYR-GCK GRVGVCALMAIVGGVLLVVGLAGL Mvan_0277|M.vanbaalenii_PYR-1 GRRGVSLLLAVVGCVLVAVGFAGL MLBr_01233|M.leprae_Br4923 RRLEVATLLAGVSCLLLAVGIAGL TH_4435|M.thermoresistible__bu RGRVFAVGLAVLGGYLLGTGLTG- Mb1544|M.bovis_AF2122/97 RRQISLTILIGVGFLFLYQGVTSL Rv1517|M.tuberculosis_H37Rv RRQISLTILIGVGFLFLYQGVTSL MMAR_2352|M.marinum_M RRQIIAVAVGLAGIALVTNGMGTI MUL_1527|M.ulcerans_Agy99 RRQIIAVAVGLAGIALVTNGMGTI MSMEG_4733|M.smegmatis_MC2_155 RRPIFACILGLFGVLMLASGVSTI MAB_4697|M.abscessus_ATCC_1997 RRKILIAMCMVAGISLLIHGLGGI MAV_3059|M.avium_104 HRQILVALFTVVGVSQLAQGLHLV . : *.