For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
WTTVLILAVMTATEPVRLGVAIFLVSKPRPMVNLLAFWFGGMATGIGVALAVLLLLGDLANAIVDNVSSL AATSVVGHLQVGLGVVALLVAALVATGFSVRSPALVASGAGDSSTLMVAETPTRFSRLMASAQGALEGGF PWAAFVVGLSSAGPPPVEYLVALTAIGASGAAMGTQLSATFVYLLVMLAIIEIPLISYLVHPGRTEATML WLRNWLRAHRRQIIAVAVGLAGIALVTNGMGTI*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2352 | - | - | 100% (244) | hypothetical protein MMAR_2352 |
M. marinum M | MMAR_3658 | - | 6e-45 | 42.21% (244) | hypothetical protein MMAR_3658 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1544 | - | 1e-45 | 41.77% (249) | hypothetical protein Mb1544 |
M. gilvum PYR-GCK | Mflv_0400 | - | 5e-32 | 35.54% (242) | hypothetical protein Mflv_0400 |
M. tuberculosis H37Rv | Rv1517 | - | 3e-46 | 42.17% (249) | hypothetical protein Rv1517 |
M. leprae Br4923 | MLBr_01233 | - | 1e-28 | 35.08% (248) | hypothetical protein MLBr_01233 |
M. abscessus ATCC 19977 | MAB_4097c | - | 6e-37 | 34.20% (269) | hypothetical protein MAB_4097c |
M. avium 104 | MAV_3059 | - | 5e-36 | 32.31% (260) | hypothetical protein MAV_3059 |
M. smegmatis MC2 155 | MSMEG_4733 | - | 5e-42 | 35.80% (257) | hypothetical protein MSMEG_4733 |
M. thermoresistible (build 8) | TH_4435 | - | 7e-49 | 40.24% (246) | PUTATIVE putative conserved hypothetical transmembrane protein |
M. ulcerans Agy99 | MUL_1527 | - | 1e-131 | 99.18% (244) | hypothetical protein MUL_1527 |
M. vanbaalenii PYR-1 | Mvan_0277 | - | 1e-32 | 35.83% (240) | hypothetical protein Mvan_0277 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2352|M.marinum_M ----MWTTVLILAVMTATEPVRLGVAIFLVSKPRPMVNLLAFWFGGMATG MUL_1527|M.ulcerans_Agy99 ----MWTTVLILAVMTATEPVRLGVAIFLVSKPRPMVNLLAFWFGGMATG Mb1544|M.bovis_AF2122/97 ----MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAG Rv1517|M.tuberculosis_H37Rv ----MWTMVLLLGLGMAIDPARLGLAVVMLSRRRPMLNLFAFWVGGMVAG MSMEG_4733|M.smegmatis_MC2_155 ----MWSAVLVLALVSAVDPVRIGITLLLIGRERPVANLLAYWLGLMAAG Mflv_0400|M.gilvum_PYR-GCK ----MWITLLAMAVAVSLEPFRIGMTVLMINRPRPGLQLLAFLTGGFAMG Mvan_0277|M.vanbaalenii_PYR-1 ----MWFPLLVMAAAVSLEPFRIGMTVVMVNRPRPVLQLLSFLAGGFVMG MLBr_01233|M.leprae_Br4923 ----MWITILLMAIAISLEPFRIGMTVLMLNRPRPTLQLLVFLCSGFTMG TH_4435|M.thermoresistible__bu VFGTMWGAVVLFALMAMGEPLRIGAAVLLISRPRPMFNLFLFWLGGIVAT MAB_4097c|M.abscessus_ATCC_199 ----MWRELLGLAFLMSLNPVLLGLILVVISRPRPVQNLLAFWVGALVVN MAV_3059|M.avium_104 ----MWGSVLGLGMLAALNPVRLGLALLMISRPRPGPSLLAYWIGGLTVC ** :: :. :* :* :.::.: ** .*: : . :. MMAR_2352|M.marinum_M IGVALAVLLLLGDLANAI--VDNVSSLAATSVVGHLQVGLG----VVALL MUL_1527|M.ulcerans_Agy99 IGVALAVLLLLGDLANAI--VDNVSSLAATSVVGHLQVGLG----VVALL Mb1544|M.bovis_AF2122/97 VGIALAVLVFMRDVALAA--IQGVVSAANEFREAVGILAGGRLHIVIGVI Rv1517|M.tuberculosis_H37Rv VGIALAVLVFMRDVALAA--IQGVVSAANEFREAVGILAGGRLHIVIGVI MSMEG_4733|M.smegmatis_MC2_155 VGLAVIALTFLPGVVRPV--TEFVVAAAEKPVIPPLQIAMGLLAIPVAVV Mflv_0400|M.gilvum_PYR-GCK TAVGVAVLFLLR-----------PVLDSAQFTLPRVQIVVG----LVVLC Mvan_0277|M.vanbaalenii_PYR-1 TAVGLIVLFVLR-----------PALGSAHFTLPRVQLGVG----AVVLV MLBr_01233|M.leprae_Br4923 MTVGFVVLFVFRR----------RLMASMQLTLPKVQILIG----VLALL TH_4435|M.thermoresistible__bu VLAGVVVLFLLRDVIGVV--TAAAAASGSAIDIMSIQIAVG----ALALA MAB_4097c|M.abscessus_ATCC_199 VPSFVIALFALHMVPSFASFAKNLATADPGSSIKPLQLGTG----VLCVV MAV_3059|M.avium_104 VPELLIPVLLLNFTPMFG--HPSHASPSTGSALGKIQIGLG----VVGLS . : : : * : : MMAR_2352|M.marinum_M VAALVATGFSVRSPALVAS--------GAGDSSTLMVAETPTRFSRLMAS MUL_1527|M.ulcerans_Agy99 VAALVATGFSVRSPALVAS--------GAGDSSTLMVAETPTRFSRLMAS Mb1544|M.bovis_AF2122/97 MLLLAAR-MVARARAQVGVPVGPVGVADGGMSALALAQRPPGLVARLEVR Rv1517|M.tuberculosis_H37Rv MLLLAAR-MVARARAQVGVPVGPVGVADGGMSALALAQRPPGLVARLEVR MSMEG_4733|M.smegmatis_MC2_155 IAMRARRRTLVAPVSEVADPVSAMAFAAAATPAASTASGKRSLLSRLSWP Mflv_0400|M.gilvum_PYR-GCK TAAAVGSGLVGR---------------------PRDPGRAPG---VLAMR Mvan_0277|M.vanbaalenii_PYR-1 NAVLLATGVLGG---------------------NRD-GTAAGRWAPLVTR MLBr_01233|M.leprae_Br4923 VAAVLTVQVCISSEPPAES--------------PVDSASGPPKPSKWAPR TH_4435|M.thermoresistible__bu LAPVILLRSAARRKAAAPVGGPDW---PTGRGPSVDSSDAPSAFSRLSAR MAB_4097c|M.abscessus_ATCC_199 IAVWIATRLRSRQRENQPVATGAGGDSSVLVLDSEAPAVEARPVGRIRGA MAV_3059|M.avium_104 IAAVLTVRFAARQRAAAPPPD---DRTSELSAAPGATIAMPRLLTRAQDV MMAR_2352|M.marinum_M A-------------QGA-LEGGFPWAAFVVGLSSAGPPPVEYLVALTAIG MUL_1527|M.ulcerans_Agy99 A-------------QGA-LEGGFPWAAFVVGLSSAGPPPVEYLVALTAIG Mb1544|M.bovis_AF2122/97 T-------------QQM-LQGDVVWPAFVVGVASSAPP-FESVVALTVIM Rv1517|M.tuberculosis_H37Rv T-------------QQM-LQGDVVWPAFVVGVASSAPP-FESVVALTVIM MSMEG_4733|M.smegmatis_MC2_155 A-------------LFSGRWGNSAAMAFAAGLFSATPP-LEYCFAILAIA Mflv_0400|M.gilvum_PYR-GCK --------------ARRLLDGRSLWTAAAVGLGTAL-PSVDYLAALALIA Mvan_0277|M.vanbaalenii_PYR-1 --------------ARRLLEGRSLWTAGVAGLGIAL-PSIDYLAALALIV MLBr_01233|M.leprae_Br4923 P-------------LARLLNGDSLWVAGVAGLGIAL-PSVDYLAALAVIL TH_4435|M.thermoresistible__bu --------------VQGVLQGGSPWVAFFIGAWLGPGPPVELVAALTAIV MAB_4097c|M.abscessus_ATCC_199 VSYLGSTFQRLLHRGKGAWENGALWVALVLGIGYMPPPPLVLLVDT-IIV MAV_3059|M.avium_104 SPDDRSVLRRLLGRMHSAWESGASWVAWVIGVISVP-VDGVLFIVA-IIA . * * * MMAR_2352|M.marinum_M ASGAAMGTQLSATFVYLLVMLAIIEIPLISYLVHPGRTEATMLWLRNWLR MUL_1527|M.ulcerans_Agy99 VSGAAMGTQLSATFVYLLVMLAIIEIPLIGYLVHPGRTEATMLWLRNWLR Mb1544|M.bovis_AF2122/97 ASGAEIGTQFGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVR Rv1517|M.tuberculosis_H37Rv ASGAEIGTQLGAFVVFTLLVLAVIEIPLVAYLAIPQQTQQVMLRFQDWVR MSMEG_4733|M.smegmatis_MC2_155 ASGAAIGTQVCAAVVFSLVSFAIAEIPLVGYLASPVKTKAIVARMHDWIG Mflv_0400|M.gilvum_PYR-GCK ASGAAAATQFGALMAFNAVAFALIEIPLLCYLVSPDRTRAVLASLNSWIR Mvan_0277|M.vanbaalenii_PYR-1 ASGAAAAVQFSALIVFNVVAFALVEIPLLCYLVAPDRTRAALSSLYEWVR MLBr_01233|M.leprae_Br4923 TSGAAATTQVGALLMFNVVAFALIEIPLAAYLLAPDTTRAWTAALNNWIR TH_4435|M.thermoresistible__bu ASGATAGTQVGAVVVFALVMFAFAEIPLISHLVAPTRTEAVMMRLHTWVR MAB_4097c|M.abscessus_ATCC_199 GSGTAMSTQVIAAVVFVFTMLAVFEIALISYVIAPARTQAVLEPIHNWAL MAV_3059|M.avium_104 ASGASVTAQVSASVAFVVLMYAVVEVILVGYLATPGKTQSLLLVLHDWVR **: .*. * . : *. *: * :: * *. : * MMAR_2352|M.marinum_M AHRRQIIAVAVGLAGIALVTNGMGTI MUL_1527|M.ulcerans_Agy99 AHRRQIIAVAVGLAGIALVTNGMGTI Mb1544|M.bovis_AF2122/97 SNRRQISLTILIGVGFLFLYQGVTSL Rv1517|M.tuberculosis_H37Rv SNRRQISLTILIGVGFLFLYQGVTSL MSMEG_4733|M.smegmatis_MC2_155 TYRRPIFACILGLFGVLMLASGVSTI Mflv_0400|M.gilvum_PYR-GCK ARGRVGVCALMAIVGGVLLVVGLAGL Mvan_0277|M.vanbaalenii_PYR-1 AQGRRGVSLLLAVVGCVLVAVGFAGL MLBr_01233|M.leprae_Br4923 SRRRLEVATLLAGVSCLLLAVGIAGL TH_4435|M.thermoresistible__bu VHRGRVFAVGLAVLGGYLLGTGLTG- MAB_4097c|M.abscessus_ATCC_199 SHRQLVLLVLFAVVGIWQVLTGVGLV MAV_3059|M.avium_104 TYHRQILVALFTVVGVSQLAQGLHLV . . : *.