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M. smegmatis MC2 155 MSMEG_4560 (-)

IRRLCAGAAVLVVVTAGCGRPAAPVAVSAGAHGYPVTVDNCGRQVVVDASPRRAVSLNQGSTEVMLSLGL
ADRMVGTATWTDPVRDDLAEDNARVPVLAVNKPSLETVLDAEPDFVSASFGGTLGPGGVADRNRFEALGV
PTYLAPSDCEGKTSVNGDGARTEPFTMDAIYTEITDLAAIFDVHERGAELVGDLRRRMDSVSGTRTDVDM
AFWFSDVRAPYFAGCCGASGVIADAVGARNVFDDTTDEWPQVSWESVAERDPDVLVLADLSRRTIEGDSL
QTKIAFLESNPVTRRLTAVQQRRYIVVNGADLNPSIRTVDGVEKVARGLRELGLASDR*

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_4560	-	-	100% (339)	periplasmic binding protein
M. smegmatis MC2 155	MSMEG_4561	-	2e-93	53.07% (326)	ABC Fe3+-siderophores transporter, periplasmic binding protein
M. smegmatis MC2 155	MSMEG_6064	-	1e-42	33.54% (325)	lipoprotein

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	Mflv_3882	-	3e-42	35.24% (332)	periplasmic binding protein
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	-	-	-	-	-
M. abscessus ATCC 19977	MAB_0547c	-	7e-28	27.19% (342)	putative iron compound ABC transporter, substrate-binding
M. marinum M	-	-	-	-	-
M. avium 104	-	-	-	-	-
M. thermoresistible (build 8)	TH_3189	-	1e-106	57.31% (335)	PUTATIVE periplasmic binding protein
M. ulcerans Agy99	-	-	-	-	-
M. vanbaalenii PYR-1	-	-	-	-	-

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_4560|M.smegmatis_MC2_155      ---MIR-----RLCAGAAVLVVVTAGCGRPAAPVAVSAGAHGYPVTVDNC
TH_3189|M.thermoresistible__bu      MPARIRNARVTKLTATFAAVLTVTG-CAGSAATSASPDTADGYPVQLENC
Mflv_3882|M.gilvum_PYR-GCK          ---MMPS---RRCLSSVAAVMAALVSLTGCAASAPPESGATSAVVSVDNC
MAB_0547c|M.abscessus_ATCC_199      -------------MKALIGSVAALALLTTSCATIDEASTAT-DHVSVDNC
                                                        :..       .*.      *    * ::**

MSMEG_4560|M.smegmatis_MC2_155      GRQVVVDASPRRAVSLNQGSTEVMLSLGLADRMVGTATWTDPVRDDLAED
TH_3189|M.thermoresistible__bu      GRTVSIPAPPQRAVSLNQGSTEILLSLGLADRMVGTATWTDPVRENLAAD
Mflv_3882|M.gilvum_PYR-GCK          GEQIRLEAPPQRAVGYFQQSVELMLALGLGESVVATVYPDNPPLPRYAEA
MAB_0547c|M.abscessus_ATCC_199      GAPLQVPVPVTRVVSNDTGVTELLFALGLQDRMAGYFLDSGQDRDISTSP
                                    *  : : ..  *.*.     .*::::*** : :..     .      :  

MSMEG_4560|M.smegmatis_MC2_155      NARVPVLAVNKPS---LETVLDAEPDFVSASFGGTLGPGGVADRNRFEAL
TH_3189|M.thermoresistible__bu      NAGVERLADNHPS---LERVLQTEPDLVTASFASTLGPGGVTTPEALEQL
Mflv_3882|M.gilvum_PYR-GCK          YRSIPQLSNKDAS---FEQVLSAAPDFVYGGYASAFDDTAGRSRRAFHDA
MAB_0547c|M.abscessus_ATCC_199      WKAQFESTTNLGQGFTREAVQTARPDLVFAGWNYGFSETSGLTPDWVRSI
                                           : :  .    * *  : **:* ..:   :.  .      ..  

MSMEG_4560|M.smegmatis_MC2_155      GVPTYLAPSDCEGKTSVNGDGARTEPFTMDAIYTEITDLAAIFDVHERGA
TH_3189|M.thermoresistible__bu      GIPSYLSPADCIKNNDTDGDGSRDAALEMDTVYQEITDLAEIFGVPDRGA
Mflv_3882|M.gilvum_PYR-GCK          GVATYLNPEYCAT-----------EPITMDDVHTEIRTIAAIFGVPERAD
MAB_0547c|M.abscessus_ATCC_199      GAVPYQLTEACRQ----SGTARRGIKAPLEALYEDLTNLGIIFGVQDRAR
                                    *  .*  .  *                 :: :: ::  :. **.* :*. 

MSMEG_4560|M.smegmatis_MC2_155      ELVGDLRRRMDSVSGTR--TDVDM-AFWFSDVR-APYFAGCCGASGVIAD
TH_3189|M.thermoresistible__bu      ALVEELQTRMAAAADTAPGAPVRV-LFWFANSE-SPYLAGCCGAPGIIAR
Mflv_3882|M.gilvum_PYR-GCK          ALIEEMRDRVAAAAAAVDGVRTAK-IFVYDSGEDTAFTAGRQGIGNQIIE
MAB_0547c|M.abscessus_ATCC_199      DLIASYRQTIEDVQSHAPHEQAPVRVFLYDSGDAEPFTSGRTAAPQQIIE
                                     *: . :  :  .        .    * : .    .: :*  .    *  

MSMEG_4560|M.smegmatis_MC2_155      AVGARNVFDDTTDEWPQVSWESVAERDPDVLVLADLSRRTIEGDSLQTKI
TH_3189|M.thermoresistible__bu      TLGLTNVFDDTNAEWPQVNWETVADRDPDVLIIGDLTRKSQTAESAAAKI
Mflv_3882|M.gilvum_PYR-GCK          LAGGTNIFGDVEDTFADVSWEQVVQRNPDVIVIYDYFG----TPSVEDKW
MAB_0547c|M.abscessus_ATCC_199      KAGGRNIFSDLNDSWTTSAWETAAQRDPQVIIVCDYGVGP--NNTAQAKI
                                      *  *:*.*    :.   ** ..:*:*:*::: *         :   * 

MSMEG_4560|M.smegmatis_MC2_155      AFLESNPVTRRLTAVQQRRYIVVNGADLNPSIRTVDGVEKVARGLRELGL
TH_3189|M.thermoresistible__bu      EFLKSHPVTRELTAVREQRYIPLSGAAMNPSIRTVDGVEQVAAALREFGF
Mflv_3882|M.gilvum_PYR-GCK          AFLRSRPELAGVPAIRDDRYAVLTLQDAVLGVRAPYAVETLARQVHPERF
MAB_0547c|M.abscessus_ATCC_199      DLLKAQPLMRHTQAVRDENFIVLPYAALVEGPRNPDAIVTLANYLRSKGF
                                     :*.:.*      *::: .:  :       . *   .:  :*  ::   :

MSMEG_4560|M.smegmatis_MC2_155      ASDR
TH_3189|M.thermoresistible__bu      GG--
Mflv_3882|M.gilvum_PYR-GCK          R---
MAB_0547c|M.abscessus_ATCC_199      ----