For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MMPSRRCLSSVAAVMAALVSLTGCAASAPPESGATSAVVSVDNCGEQIRLEAPPQRAVGYFQQSVELMLA LGLGESVVATVYPDNPPLPRYAEAYRSIPQLSNKDASFEQVLSAAPDFVYGGYASAFDDTAGRSRRAFHD AGVATYLNPEYCATEPITMDDVHTEIRTIAAIFGVPERADALIEEMRDRVAAAAAAVDGVRTAKIFVYDS GEDTAFTAGRQGIGNQIIELAGGTNIFGDVEDTFADVSWEQVVQRNPDVIVIYDYFGTPSVEDKWAFLRS RPELAGVPAIRDDRYAVLTLQDAVLGVRAPYAVETLARQVHPERFR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_3882 | - | - | 100% (326) | periplasmic binding protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0547c | - | 3e-34 | 29.91% (331) | putative iron compound ABC transporter, substrate-binding |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_6064 | - | 2e-80 | 48.32% (327) | lipoprotein |
| M. thermoresistible (build 8) | TH_3189 | - | 2e-41 | 32.32% (328) | PUTATIVE periplasmic binding protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3882|M.gilvum_PYR-GCK MMPSRR---CLSSVAAVMAALVSLTGCAASAPPESGATSAV---VSVDNC
MSMEG_6064|M.smegmatis_MC2_155 -MAARR---SIACWSVVSAIALVASGCTSTSASDAGQAAAPGFPITVDNC
TH_3189|M.thermoresistible__bu -MPARIRNARVTKLTATFAAVLTVTGCAGSAATSASPDTADGYPVQLENC
MAB_0547c|M.abscessus_ATCC_199 ---------MKALIGSVAALALLTTSCATIDEASTATDHVS-----VDNC
: . * : :.*: ..:. . ::**
Mflv_3882|M.gilvum_PYR-GCK GEQIRLEAPPQRAVGYFQQSVELMLALGLGESVVATVYPD----NPPLPR
MSMEG_6064|M.smegmatis_MC2_155 GVTTTYERPPTRAVALNQHAIEVLLALGLEDSMVGTSFLD----DAILPE
TH_3189|M.thermoresistible__bu GRTVSIPAPPQRAVSLNQGSTEILLSLGLADRMVGTATWT----DPVREN
MAB_0547c|M.abscessus_ATCC_199 GAPLQVPVPVTRVVSNDTGVTELLFALGLQDRMAGYFLDSGQDRDISTSP
* * *.*. *::::*** : :.. :
Mflv_3882|M.gilvum_PYR-GCK YAEAYRSIPQLSNKDASFEQVLSAAPDFVYGGYASAFDDTAGRSRRAFHD
MSMEG_6064|M.smegmatis_MC2_155 YQGAYDRIPVLADEYPSYEALLTVEPDFVYGGWDSAFDDKEGRARQRLSD
TH_3189|M.thermoresistible__bu LAADNAGVERLADNHPSLERVLQTEPDLVTASFASTLGPGGVTTPEALEQ
MAB_0547c|M.abscessus_ATCC_199 WKAQFESTTNLGQG-FTREAVQTARPDLVFAGWNYGFSETSGLTPDWVRS
*.: : * : . **:* ..: :. : . .
Mflv_3882|M.gilvum_PYR-GCK AGVATYLNPEYCATEP-----------ITMDDVHTEIRTIAAIFGVPERA
MSMEG_6064|M.smegmatis_MC2_155 AGINTHLNIEDCSAEP-----------ATMATVDEEIRTIGEIFGVEERA
TH_3189|M.thermoresistible__bu LGIPSYLSPADCIKNNDTDGDGSRDAALEMDTVYQEITDLAEIFGVPDRG
MAB_0547c|M.abscessus_ATCC_199 IGAVPYQLTEACRQSGTARRG----IKAPLEALYEDLTNLGIIFGVQDRA
* .: * . : : :: :. **** :*.
Mflv_3882|M.gilvum_PYR-GCK DALIEEMRDRVAAAAAAVDGVRT-AKIFVYDSGEDTAFTAGRQGIGNQII
MSMEG_6064|M.smegmatis_MC2_155 RHLLDLLHRDLAETAESVNGVEP-VRVAVYDSGEASVFTSGGKGIGNQMI
TH_3189|M.thermoresistible__bu AALVEELQTRMAAAADTAPGAP--VRVLFWFANSESPYLAGCCGAPGIIA
MAB_0547c|M.abscessus_ATCC_199 RDLIASYRQTIEDVQSHAPHEQAPVRVFLYDSGDAEPFTSGRTAAPQQII
*: : : . . .:: .: :.. : :* . :
Mflv_3882|M.gilvum_PYR-GCK ELAGGTNIFGDVEDTFADVSWEQVVQRNPDVIVIYDYF----GTPSVEDK
MSMEG_6064|M.smegmatis_MC2_155 EAAGAVNLFDDVQKVWADVSFEQFADRAPDVILIYDY-----GDESAEQK
TH_3189|M.thermoresistible__bu RTLGLTNVFDDTNAEWPQVNWETVADRDPDVLIIGDLTRKSQTAESAAAK
MAB_0547c|M.abscessus_ATCC_199 EKAGGRNIFSDLNDSWTTSAWETAAQRDPQVIIVCDYG--VGPNNTAQAK
. * *:*.* : :. :* .:* *:*::: * :. *
Mflv_3882|M.gilvum_PYR-GCK WAFLRSRPELAGVPAIRDDRYAVLTLQDAVLGVRAPYAVETLARQVHPER
MSMEG_6064|M.smegmatis_MC2_155 KAFLTAHPMLAHVPAIVHRRFAVLPLSSVVVGVRVAKAVDSLARQLHPDR
TH_3189|M.thermoresistible__bu IEFLKSHPVTRELTAVREQRYIPLSGAAMNPSIRTVDGVEQVAAALREFG
MAB_0547c|M.abscessus_ATCC_199 IDLLKAQPLMRHTQAVRDENFIVLPYAALVEGPRNPDAIVTLANYLRSKG
:* ::* *: . .: *. . * .: :* ::
Mflv_3882|M.gilvum_PYR-GCK FR-
MSMEG_6064|M.smegmatis_MC2_155 F--
TH_3189|M.thermoresistible__bu FGG
MAB_0547c|M.abscessus_ATCC_199 F--
*