For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTRFLLARAARMVLTVFAVVLITFGLTRVAYRNPARMLAPENASEETIAAIANSLRLNDPWYQQLWYYVV RGPEIKGTPTGLVNWPPSLGYSYRQQRPVTELILEKIPVTFSLAAGALLLWITISVVLGVYAARRPGSVF DHVTSGVSYVLLSVPTFVTGVILLFVLYYQLSLAGVKFFPSGGYVALTESPAEWARHLLLPWTTLVLVEV GLFQRVVRASVLEVADKDYIRTARAKGLGAHGVYFNHALSAALNPILTLGAIEFAAILGGAIITEQIFGL DGVGRLAVNAANNGDAPVVIGCTLLGAVIFVVSTFVIDVITHARSGK
 
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation | 
| M. smegmatis MC2 155 | MSMEG_4543 | - | - | 100% (327) | ABC transporter system integral membrane protein | 
| M. smegmatis MC2 155 | MSMEG_0641 | - | 6e-51 | 36.45% (321) | binding-protein-dependent transport systems inner membrane | 
| M. smegmatis MC2 155 | MSMEG_4355 | - | 1e-45 | 33.12% (320) | peptide ABC transporter, permease protein | 
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation | 
| M. bovis AF2122 / 97 | Mb3689c | dppB | 2e-29 | 27.99% (318) | peptide ABC transporter transmembrane protein | 
| M. gilvum PYR-GCK | Mflv_2760 | - | 9e-48 | 34.28% (318) | binding-protein-dependent transport systems inner membrane | 
| M. tuberculosis H37Rv | Rv3665c | dppB | 2e-29 | 27.99% (318) | peptide ABC transporter transmembrane protein | 
| M. leprae Br4923 | MLBr_01124 | - | 2e-25 | 27.27% (330) | putative binding-protein dependent transport protein | 
| M. abscessus ATCC 19977 | MAB_0427 | - | 5e-32 | 26.02% (319) | peptide ABC transporter transmembrane protein | 
| M. marinum M | MMAR_5153 | dppB | 7e-28 | 27.47% (324) | dipeptide-transport integral membrane protein ABC | 
| M. avium 104 | MAV_0465 | dppB | 8e-30 | 28.93% (318) | ABC transporter, permease protein DppB | 
| M. thermoresistible (build 8) | TH_2645 | - | 5e-45 | 32.81% (320) | PUTATIVE binding-protein-dependent transport systems inner | 
| M. ulcerans Agy99 | MUL_4239 | dppB | 2e-27 | 27.16% (324) | dipeptide-transport integral membrane protein ABC | 
| M. vanbaalenii PYR-1 | Mvan_0436 | - | 6e-51 | 37.07% (321) | binding-protein-dependent transport systems inner membrane | 
CLUSTAL 2.0.9 multiple sequence alignment
Mb3689c|M.bovis_AF2122/97           ----------------MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDP
Rv3665c|M.tuberculosis_H37Rv        ----------------MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDP
MAV_0465|M.avium_104                ----------------MGWYIARRIAVMVPVFLGATLLIYAMVFLLPGDP
MMAR_5153|M.marinum_M               ----------------MVWYVARRILAMVPVFLGATLLIYGMVFLLPGDP
MUL_4239|M.ulcerans_Agy99           ----------------MVWYVARRILAMVPVFLGATLLIYGMVFLLPGDP
MAB_0427|M.abscessus_ATCC_1997      MTTVLGNVRQFWQSAGLFRYIAKRLLLAIPVLIGTSLLIYSLVYALPGDP
MLBr_01124|M.leprae_Br4923          ----------------MMRFLARRLLNYVVLLALASFLTYCLTSMAFAPL
Mflv_2760|M.gilvum_PYR-GCK          --------------MPILRFVARRLLYSAVVMFGVLLVVFALVHLVPGDP
TH_2645|M.thermoresistible__bu      ---------MRFVTHPIARFLGRRLLYSLAVLFGVLVVVFGLMQLVPGDP
MSMEG_4543|M.smegmatis_MC2_155      ----------------MTRFLLARAARMVLTVFAVVLITFGLTRVAYR-N
Mvan_0436|M.vanbaalenii_PYR-1       ----------------MARFIARRLLGMVAVLFAISVIVFLIFNVVPNSD
                                                    :  ::  *       .    .: : :        
Mb3689c|M.bovis_AF2122/97           VAALAGDRPLTPAVAAQLRSHYHLDDP--FLVQYLRYLGGILHGDLG---
Rv3665c|M.tuberculosis_H37Rv        VAALAGDRPLTPAVAAQLRSHYHLDDP--FLVQYLRYLGGILHGDLG---
MAV_0465|M.avium_104                VAAIAGDRPLTPAVAAALRARYHLDDP--FLVQYLRYLGGVLRGDLG---
MMAR_5153|M.marinum_M               LAAIAGDRPLTPAVAQQLRARYHLDDP--FLVQYAHYLGGVLHGDLG---
MUL_4239|M.ulcerans_Agy99           LAAIAGDRPLTPAVAQQLRARYHLDDP--FLVQYAHYLGGVLHGDLG---
MAB_0427|M.abscessus_ATCC_1997      IRALAGDRPFTPEVMAQLRERFHLNDP--FLVRYGKYIVGFLHGDFG---
MLBr_01124|M.leprae_Br4923          DSLLQRSPHPPQAMVDAKAHALGLDKP--IPIRYANWASHAIRGDFG---
Mflv_2760|M.gilvum_PYR-GCK          VRIALGTR-YTPEAYEALRAASGLDRP--LVSQFFGYIGSALTGDLG---
TH_2645|M.thermoresistible__bu      VRIALGTR-YTPEAYQALRSASGLDRP--ILEQFVGYLTSAVRGDLG---
MSMEG_4543|M.smegmatis_MC2_155      PARMLAPENASEETIAAIANSLRLNDPWYQQLWYYVVRGPEIKGTPTGLV
Mvan_0436|M.vanbaalenii_PYR-1       PAARIAGKNADPDLIARVNADLGLDQP--LPVQYVTMMKQIFTGQLT---
                                                           *: *      :       . *      
Mb3689c|M.bovis_AF2122/97           -------RAYS-GLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAG
Rv3665c|M.tuberculosis_H37Rv        -------RAYS-GLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAG
MAV_0465|M.avium_104                -------RAYS-GLPVSDVLAHAFPVTLRLSLIALAVEAVLGIGFGVIAG
MMAR_5153|M.marinum_M               -------RAYS-GLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAG
MUL_4239|M.ulcerans_Agy99           -------RAYS-GLPVSAVLAHAFPVTIRLAWIALAVEAVLGIGFGVIAG
MAB_0427|M.abscessus_ATCC_1997      -------TDFQ-QRPVAQTVSQRLPVTLRLTVVAVAFETIIGITAGVLCA
MLBr_01124|M.leprae_Br4923          -------TTIT-GQPVGSTLGRRVGVSLRLLIIGSLTGTVLGVTAGAWGA
Mflv_2760|M.gilvum_PYR-GCK          -------VSFRNGDPVTVTLLERLPATLSLGLAGIVIALAIALPAGIYAA
TH_2645|M.thermoresistible__bu      -------VSFRNGDPVTLVLLERLPATVSLALAGIAIALAIALPAGIWSA
MSMEG_4543|M.smegmatis_MC2_155      NWPPSLGYSYRQQRPVTELILEKIPVTFSLAAGALLLWITISVVLGVYAA
Mvan_0436|M.vanbaalenii_PYR-1       --------SYASNRNVVEQIWEGLPATFSLCIGAAVIWMSLAVLFGYLSA
                                                   *   : . . .:. *   .      :.:  *   .
Mb3689c|M.bovis_AF2122/97           LRQGGIFDSAVLVTGLVIIAIPIFVLG-------FLAQFLFGVQLE----
Rv3665c|M.tuberculosis_H37Rv        LRQGGIFDSAVLVTGLVIIAIPIFVLG-------FLAQFLFGVQLE----
MAV_0465|M.avium_104                LRQGGLFDSAVLITGLVIIAVPIFVLG-------FLAQFVFGVRLG----
MMAR_5153|M.marinum_M               LRQGGIFDATVLLTGLIIIAVPIFVLG-------FLAQYLFGVRLG----
MUL_4239|M.ulcerans_Agy99           LRQGGIFDATVLLTGLIIIAAPIFVLG-------FLAQYLFGVRLG----
MAB_0427|M.abscessus_ATCC_1997      VRRGSFYDNLVLVTTTLLVSMPVFVLG-------FLAQYLFGFKLG----
MLBr_01124|M.leprae_Br4923          IRQYQLSDRVVTLLALLVLSTPTFVIANLLILSALRVNWAFGIQLFDY-T
Mflv_2760|M.gilvum_PYR-GCK          LREGRLSDALVRISSQFGVSIPDFWMG-------ILLIALFSTVLG----
TH_2645|M.thermoresistible__bu      LRDGRAGAAAVRVASQVGVSVPDFWMG-------ILLIALFASTLG----
MSMEG_4543|M.smegmatis_MC2_155      RRPGSVFDHVTSGVSYVLLSVPTFVTG-------VILLFVLYYQLSLAGV
Mvan_0436|M.vanbaalenii_PYR-1       VHAGRFADRALTVLSLVGISMPVFWLA-------AILLYFLSFK-----V
                                     :              . :: * *  .             :         
Mb3689c|M.bovis_AF2122/97           -------IAPVTVGERASVGRLLLPGIVLGAMSFAYVVRLTRSAVAANAH
Rv3665c|M.tuberculosis_H37Rv        -------IAPVTVGERASVGRLLLPGIVLGAMSFAYVVRLTRSAVAANAH
MAV_0465|M.avium_104                -------IAPVTVGNAATFTRLLLPGIVLGSVSFAYVVRLTRSTVAVNAH
MMAR_5153|M.marinum_M               -------LAPVTVGARTTLDRLLLPGMVLGAVSFAYVVRLTRSAVAANAH
MUL_4239|M.ulcerans_Agy99           -------LAPVTVGARTTLDRLLLPGMVLGAVSFAYVVRLTRSAVAANAH
MAB_0427|M.abscessus_ATCC_1997      -------WFPI-AGIRDGWYSFLLPGLVLASLSMAYVARLTRTSMLETMD
MLBr_01124|M.leprae_Br4923          GETSPGVYGGAWAHVIDRLRHLILPTLTLALVGAAGYSRYQRNAMLDVLS
Mflv_2760|M.gilvum_PYR-GCK          -WLPTSGYRPLFEDPAGWLRHIILPALTVAVVAAAIMTRYVRAAVLEVAS
TH_2645|M.thermoresistible__bu      -WLPTSGYRALSDDPVGWLRHLVLPALTVGLVAAAIMTRYIRSAVLEVAA
MSMEG_4543|M.smegmatis_MC2_155      KFFPSGGYVALTESPAEWARHLLLPWTTLVLVEVGLFQRVVRASVLEVAD
Mvan_0436|M.vanbaalenii_PYR-1       QLFPTGSYVDLTEDPLDWAYHLVLPWFTLAVLFIGFYSRVLRSNMLDAMN
                                                         ::**  .:  :  .   *  *  :     
Mb3689c|M.bovis_AF2122/97           ADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGG-AIVTE
Rv3665c|M.tuberculosis_H37Rv        ADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGG-AIVTE
MAV_0465|M.avium_104                ADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGG-AIVTE
MMAR_5153|M.marinum_M               ADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGG-AVVTE
MUL_4239|M.ulcerans_Agy99           ADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGG-AVVTE
MAB_0427|M.abscessus_ATCC_1997      AEFVRTARAKGISESRILLRHTLRNSLIPVVTFIGADVGALLAG-AVVTE
MLBr_01124|M.leprae_Br4923          QDFIRAARAKGLTRRRALLKHGLRTALIPMATLFAYGVAGLVTG-ALFVE
Mflv_2760|M.gilvum_PYR-GCK          MGYVRTARSKGLTPRVVTFRHTVRNALVPILTITGIQLATLLGG-VIVVE
TH_2645|M.thermoresistible__bu      AGHVRTARSKGLSPWVLTVRHTVRNALIPVLTITGIQLATILGG-VIVVE
MSMEG_4543|M.smegmatis_MC2_155      KDYIRTARAKGLGAHGVYFNHALSAALNPILTLGAIEFAAILGG-AIITE
Mvan_0436|M.vanbaalenii_PYR-1       EDYVRTARAKGLSERQVRIRHVLRNSMIPIVTLFGLDFGMVVGGGAILTE
                                      .:*:* :**:        * :  :: *: *: .  .. :: * .:..*
Mb3689c|M.bovis_AF2122/97           GIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALD
Rv3665c|M.tuberculosis_H37Rv        GIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALD
MAV_0465|M.avium_104                GIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVLIYLVTNLVVDLLYAVLD
MMAR_5153|M.marinum_M               GIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVMVYLLTNLLVDLLYAALD
MUL_4239|M.ulcerans_Agy99           GIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVMVYLLTNLLVDLLYAALD
MAB_0427|M.abscessus_ATCC_1997      SVFNIPGLGRATFDAVRNQEGAVVVSILTLIVFFYIFFNLVVDILYALLD
MLBr_01124|M.leprae_Br4923          KIFGWHGMGEWMVQGVATQDTNIIAAITIFFGTVILLAGLLSDVIYAALD
Mflv_2760|M.gilvum_PYR-GCK          VVFAWPGLGRLVFNAVAARDYPLIQGAVLLIAALFLLINLLVDVLYAVVD
TH_2645|M.thermoresistible__bu      VVFAWPGLGRLVYNAVAARDYPVIQGAVLLIAALFLLINLLVDLLYAIVD
MSMEG_4543|M.smegmatis_MC2_155      QIFGLDGVGRLAVNAANNGDAPVVIGCTLLGAVIFVVSTFVIDVITHARS
Mvan_0436|M.vanbaalenii_PYR-1       TVYNLPGVGLYAGEAIRSLDLPPLMAVTMFGAFFIVLFNTVVDVAYAVLD
                                     ::   *:*    :.    :   : .   .   . :.   : *:     .
Mb3689c|M.bovis_AF2122/97           PRIRYG-----
Rv3665c|M.tuberculosis_H37Rv        PRIRYG-----
MAV_0465|M.avium_104                PRIRYG-----
MMAR_5153|M.marinum_M               PRIRYG-----
MUL_4239|M.ulcerans_Agy99           PRIRYG-----
MAB_0427|M.abscessus_ATCC_1997      PRIRYE-----
MLBr_01124|M.leprae_Br4923          PRVRVS-----
Mflv_2760|M.gilvum_PYR-GCK          PRIRLG-----
TH_2645|M.thermoresistible__bu      PRIRLA-----
MSMEG_4543|M.smegmatis_MC2_155      GK---------
Mvan_0436|M.vanbaalenii_PYR-1       PRIRLGEAAPA
                                     :