For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTRFLLARAARMVLTVFAVVLITFGLTRVAYRNPARMLAPENASEETIAAIANSLRLNDPWYQQLWYYVV RGPEIKGTPTGLVNWPPSLGYSYRQQRPVTELILEKIPVTFSLAAGALLLWITISVVLGVYAARRPGSVF DHVTSGVSYVLLSVPTFVTGVILLFVLYYQLSLAGVKFFPSGGYVALTESPAEWARHLLLPWTTLVLVEV GLFQRVVRASVLEVADKDYIRTARAKGLGAHGVYFNHALSAALNPILTLGAIEFAAILGGAIITEQIFGL DGVGRLAVNAANNGDAPVVIGCTLLGAVIFVVSTFVIDVITHARSGK
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4543 | - | - | 100% (327) | ABC transporter system integral membrane protein |
M. smegmatis MC2 155 | MSMEG_0641 | - | 6e-51 | 36.45% (321) | binding-protein-dependent transport systems inner membrane |
M. smegmatis MC2 155 | MSMEG_4355 | - | 1e-45 | 33.12% (320) | peptide ABC transporter, permease protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3689c | dppB | 2e-29 | 27.99% (318) | peptide ABC transporter transmembrane protein |
M. gilvum PYR-GCK | Mflv_2760 | - | 9e-48 | 34.28% (318) | binding-protein-dependent transport systems inner membrane |
M. tuberculosis H37Rv | Rv3665c | dppB | 2e-29 | 27.99% (318) | peptide ABC transporter transmembrane protein |
M. leprae Br4923 | MLBr_01124 | - | 2e-25 | 27.27% (330) | putative binding-protein dependent transport protein |
M. abscessus ATCC 19977 | MAB_0427 | - | 5e-32 | 26.02% (319) | peptide ABC transporter transmembrane protein |
M. marinum M | MMAR_5153 | dppB | 7e-28 | 27.47% (324) | dipeptide-transport integral membrane protein ABC |
M. avium 104 | MAV_0465 | dppB | 8e-30 | 28.93% (318) | ABC transporter, permease protein DppB |
M. thermoresistible (build 8) | TH_2645 | - | 5e-45 | 32.81% (320) | PUTATIVE binding-protein-dependent transport systems inner |
M. ulcerans Agy99 | MUL_4239 | dppB | 2e-27 | 27.16% (324) | dipeptide-transport integral membrane protein ABC |
M. vanbaalenii PYR-1 | Mvan_0436 | - | 6e-51 | 37.07% (321) | binding-protein-dependent transport systems inner membrane |
CLUSTAL 2.0.9 multiple sequence alignment Mb3689c|M.bovis_AF2122/97 ----------------MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDP Rv3665c|M.tuberculosis_H37Rv ----------------MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDP MAV_0465|M.avium_104 ----------------MGWYIARRIAVMVPVFLGATLLIYAMVFLLPGDP MMAR_5153|M.marinum_M ----------------MVWYVARRILAMVPVFLGATLLIYGMVFLLPGDP MUL_4239|M.ulcerans_Agy99 ----------------MVWYVARRILAMVPVFLGATLLIYGMVFLLPGDP MAB_0427|M.abscessus_ATCC_1997 MTTVLGNVRQFWQSAGLFRYIAKRLLLAIPVLIGTSLLIYSLVYALPGDP MLBr_01124|M.leprae_Br4923 ----------------MMRFLARRLLNYVVLLALASFLTYCLTSMAFAPL Mflv_2760|M.gilvum_PYR-GCK --------------MPILRFVARRLLYSAVVMFGVLLVVFALVHLVPGDP TH_2645|M.thermoresistible__bu ---------MRFVTHPIARFLGRRLLYSLAVLFGVLVVVFGLMQLVPGDP MSMEG_4543|M.smegmatis_MC2_155 ----------------MTRFLLARAARMVLTVFAVVLITFGLTRVAYR-N Mvan_0436|M.vanbaalenii_PYR-1 ----------------MARFIARRLLGMVAVLFAISVIVFLIFNVVPNSD : :: * . .: : : Mb3689c|M.bovis_AF2122/97 VAALAGDRPLTPAVAAQLRSHYHLDDP--FLVQYLRYLGGILHGDLG--- Rv3665c|M.tuberculosis_H37Rv VAALAGDRPLTPAVAAQLRSHYHLDDP--FLVQYLRYLGGILHGDLG--- MAV_0465|M.avium_104 VAAIAGDRPLTPAVAAALRARYHLDDP--FLVQYLRYLGGVLRGDLG--- MMAR_5153|M.marinum_M LAAIAGDRPLTPAVAQQLRARYHLDDP--FLVQYAHYLGGVLHGDLG--- MUL_4239|M.ulcerans_Agy99 LAAIAGDRPLTPAVAQQLRARYHLDDP--FLVQYAHYLGGVLHGDLG--- MAB_0427|M.abscessus_ATCC_1997 IRALAGDRPFTPEVMAQLRERFHLNDP--FLVRYGKYIVGFLHGDFG--- MLBr_01124|M.leprae_Br4923 DSLLQRSPHPPQAMVDAKAHALGLDKP--IPIRYANWASHAIRGDFG--- Mflv_2760|M.gilvum_PYR-GCK VRIALGTR-YTPEAYEALRAASGLDRP--LVSQFFGYIGSALTGDLG--- TH_2645|M.thermoresistible__bu VRIALGTR-YTPEAYQALRSASGLDRP--ILEQFVGYLTSAVRGDLG--- MSMEG_4543|M.smegmatis_MC2_155 PARMLAPENASEETIAAIANSLRLNDPWYQQLWYYVVRGPEIKGTPTGLV Mvan_0436|M.vanbaalenii_PYR-1 PAARIAGKNADPDLIARVNADLGLDQP--LPVQYVTMMKQIFTGQLT--- *: * : . * Mb3689c|M.bovis_AF2122/97 -------RAYS-GLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAG Rv3665c|M.tuberculosis_H37Rv -------RAYS-GLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAG MAV_0465|M.avium_104 -------RAYS-GLPVSDVLAHAFPVTLRLSLIALAVEAVLGIGFGVIAG MMAR_5153|M.marinum_M -------RAYS-GLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAG MUL_4239|M.ulcerans_Agy99 -------RAYS-GLPVSAVLAHAFPVTIRLAWIALAVEAVLGIGFGVIAG MAB_0427|M.abscessus_ATCC_1997 -------TDFQ-QRPVAQTVSQRLPVTLRLTVVAVAFETIIGITAGVLCA MLBr_01124|M.leprae_Br4923 -------TTIT-GQPVGSTLGRRVGVSLRLLIIGSLTGTVLGVTAGAWGA Mflv_2760|M.gilvum_PYR-GCK -------VSFRNGDPVTVTLLERLPATLSLGLAGIVIALAIALPAGIYAA TH_2645|M.thermoresistible__bu -------VSFRNGDPVTLVLLERLPATVSLALAGIAIALAIALPAGIWSA MSMEG_4543|M.smegmatis_MC2_155 NWPPSLGYSYRQQRPVTELILEKIPVTFSLAAGALLLWITISVVLGVYAA Mvan_0436|M.vanbaalenii_PYR-1 --------SYASNRNVVEQIWEGLPATFSLCIGAAVIWMSLAVLFGYLSA * : . . .:. * . :.: * . Mb3689c|M.bovis_AF2122/97 LRQGGIFDSAVLVTGLVIIAIPIFVLG-------FLAQFLFGVQLE---- Rv3665c|M.tuberculosis_H37Rv LRQGGIFDSAVLVTGLVIIAIPIFVLG-------FLAQFLFGVQLE---- MAV_0465|M.avium_104 LRQGGLFDSAVLITGLVIIAVPIFVLG-------FLAQFVFGVRLG---- MMAR_5153|M.marinum_M LRQGGIFDATVLLTGLIIIAVPIFVLG-------FLAQYLFGVRLG---- MUL_4239|M.ulcerans_Agy99 LRQGGIFDATVLLTGLIIIAAPIFVLG-------FLAQYLFGVRLG---- MAB_0427|M.abscessus_ATCC_1997 VRRGSFYDNLVLVTTTLLVSMPVFVLG-------FLAQYLFGFKLG---- MLBr_01124|M.leprae_Br4923 IRQYQLSDRVVTLLALLVLSTPTFVIANLLILSALRVNWAFGIQLFDY-T Mflv_2760|M.gilvum_PYR-GCK LREGRLSDALVRISSQFGVSIPDFWMG-------ILLIALFSTVLG---- TH_2645|M.thermoresistible__bu LRDGRAGAAAVRVASQVGVSVPDFWMG-------ILLIALFASTLG---- MSMEG_4543|M.smegmatis_MC2_155 RRPGSVFDHVTSGVSYVLLSVPTFVTG-------VILLFVLYYQLSLAGV Mvan_0436|M.vanbaalenii_PYR-1 VHAGRFADRALTVLSLVGISMPVFWLA-------AILLYFLSFK-----V : . :: * * . : Mb3689c|M.bovis_AF2122/97 -------IAPVTVGERASVGRLLLPGIVLGAMSFAYVVRLTRSAVAANAH Rv3665c|M.tuberculosis_H37Rv -------IAPVTVGERASVGRLLLPGIVLGAMSFAYVVRLTRSAVAANAH MAV_0465|M.avium_104 -------IAPVTVGNAATFTRLLLPGIVLGSVSFAYVVRLTRSTVAVNAH MMAR_5153|M.marinum_M -------LAPVTVGARTTLDRLLLPGMVLGAVSFAYVVRLTRSAVAANAH MUL_4239|M.ulcerans_Agy99 -------LAPVTVGARTTLDRLLLPGMVLGAVSFAYVVRLTRSAVAANAH MAB_0427|M.abscessus_ATCC_1997 -------WFPI-AGIRDGWYSFLLPGLVLASLSMAYVARLTRTSMLETMD MLBr_01124|M.leprae_Br4923 GETSPGVYGGAWAHVIDRLRHLILPTLTLALVGAAGYSRYQRNAMLDVLS Mflv_2760|M.gilvum_PYR-GCK -WLPTSGYRPLFEDPAGWLRHIILPALTVAVVAAAIMTRYVRAAVLEVAS TH_2645|M.thermoresistible__bu -WLPTSGYRALSDDPVGWLRHLVLPALTVGLVAAAIMTRYIRSAVLEVAA MSMEG_4543|M.smegmatis_MC2_155 KFFPSGGYVALTESPAEWARHLLLPWTTLVLVEVGLFQRVVRASVLEVAD Mvan_0436|M.vanbaalenii_PYR-1 QLFPTGSYVDLTEDPLDWAYHLVLPWFTLAVLFIGFYSRVLRSNMLDAMN ::** .: : . * * : Mb3689c|M.bovis_AF2122/97 ADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGG-AIVTE Rv3665c|M.tuberculosis_H37Rv ADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGG-AIVTE MAV_0465|M.avium_104 ADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGG-AIVTE MMAR_5153|M.marinum_M ADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGG-AVVTE MUL_4239|M.ulcerans_Agy99 ADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGALMGG-AVVTE MAB_0427|M.abscessus_ATCC_1997 AEFVRTARAKGISESRILLRHTLRNSLIPVVTFIGADVGALLAG-AVVTE MLBr_01124|M.leprae_Br4923 QDFIRAARAKGLTRRRALLKHGLRTALIPMATLFAYGVAGLVTG-ALFVE Mflv_2760|M.gilvum_PYR-GCK MGYVRTARSKGLTPRVVTFRHTVRNALVPILTITGIQLATLLGG-VIVVE TH_2645|M.thermoresistible__bu AGHVRTARSKGLSPWVLTVRHTVRNALIPVLTITGIQLATILGG-VIVVE MSMEG_4543|M.smegmatis_MC2_155 KDYIRTARAKGLGAHGVYFNHALSAALNPILTLGAIEFAAILGG-AIITE Mvan_0436|M.vanbaalenii_PYR-1 EDYVRTARAKGLSERQVRIRHVLRNSMIPIVTLFGLDFGMVVGGGAILTE .:*:* :**: * : :: *: *: . .. :: * .:..* Mb3689c|M.bovis_AF2122/97 GIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALD Rv3665c|M.tuberculosis_H37Rv GIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALD MAV_0465|M.avium_104 GIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVLIYLVTNLVVDLLYAVLD MMAR_5153|M.marinum_M GIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVMVYLLTNLLVDLLYAALD MUL_4239|M.ulcerans_Agy99 GIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVMVYLLTNLLVDLLYAALD MAB_0427|M.abscessus_ATCC_1997 SVFNIPGLGRATFDAVRNQEGAVVVSILTLIVFFYIFFNLVVDILYALLD MLBr_01124|M.leprae_Br4923 KIFGWHGMGEWMVQGVATQDTNIIAAITIFFGTVILLAGLLSDVIYAALD Mflv_2760|M.gilvum_PYR-GCK VVFAWPGLGRLVFNAVAARDYPLIQGAVLLIAALFLLINLLVDVLYAVVD TH_2645|M.thermoresistible__bu VVFAWPGLGRLVYNAVAARDYPVIQGAVLLIAALFLLINLLVDLLYAIVD MSMEG_4543|M.smegmatis_MC2_155 QIFGLDGVGRLAVNAANNGDAPVVIGCTLLGAVIFVVSTFVIDVITHARS Mvan_0436|M.vanbaalenii_PYR-1 TVYNLPGVGLYAGEAIRSLDLPPLMAVTMFGAFFIVLFNTVVDVAYAVLD :: *:* :. : : . . . :. : *: . Mb3689c|M.bovis_AF2122/97 PRIRYG----- Rv3665c|M.tuberculosis_H37Rv PRIRYG----- MAV_0465|M.avium_104 PRIRYG----- MMAR_5153|M.marinum_M PRIRYG----- MUL_4239|M.ulcerans_Agy99 PRIRYG----- MAB_0427|M.abscessus_ATCC_1997 PRIRYE----- MLBr_01124|M.leprae_Br4923 PRVRVS----- Mflv_2760|M.gilvum_PYR-GCK PRIRLG----- TH_2645|M.thermoresistible__bu PRIRLA----- MSMEG_4543|M.smegmatis_MC2_155 GK--------- Mvan_0436|M.vanbaalenii_PYR-1 PRIRLGEAAPA :